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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:1442152..1443945+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001711-T1 ID=CBS51388_001711-T1|Name=CBS51388_001711-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1794bp|location=Sequence derived from alignment at An02:1442152..1443945+ (Aspergillus niger CBS 513.88)
ATGAATTCCGAAACCCCAGGCAAACATCTTCCCTCCCTGGCCCCAGGGCC
CCGCGGCCCTGTTGCAACTGGTTCAACCACATTGGCTAAGTCGAGGAAGA
ACTCGACCGCATGTTTGCCATGCAAGCAGGCAAAGCGAAAGGTAATACCT
GGACTTTTTAGCTCTTCTTACAAGCAGTGAGAATCACCAAGACGGTCAGG
CAGGGGAGAAGAGAGATACTGTGTGGGCGTGTCTCACCGAGTCTGGAGCA
CTCAGGCCCATTTCGGAGGACCCTGCATCTTTGCTCTTCATCTGCCAATC
ACCTTCTTTGCTCTTCTTGCTAACGTAGGAGAATCACAGTGCAGCGGACG
CCCGCCACCTTGCAAAGCATGCCAAAACACCGGGGGATGCATATTCGATG
AGACGCTCGACCTTAGGCGGAAGGTCGCTGCGAGGCGCACCCAAGGGGAG
CTAGAGTACTACCGAGGCCTGCTATACTCGCTTCTCGAGACGCTTCGATC
CTCAGACGAAGAAAAAGCGCGGCAGATGTTGGAAAAGATCCGTGGGAATG
CTCAATTGAATGACCTCGTCACTGTTATTGACGCATCAGTCACTGACTTC
AGTGATGCAAGTTCAGAGCACTCTAAAAGCGTCGGACCCGCGGAAGATAT
CCCATCACAGCACGAGCGCCCAGTCGTCGATGCCCACTTGCGGATAACAG
TGGAGAAGCTATGTGATAGTCCCTTGTTTCAAGTACCTTCCGGACCTTGG
ACAGCTGTGACTAAGGATGACCATATCGTTTCGCACCTAATATCGCTATA
CTTCACTTGGGACCATCCATTATTGCAGGTCTTGGATCAAGAGATGTTCC
TGGAACATATGTCTACCAAAGAAACCGACCCGAATTGCTGCACCTCGCTG
CTTGTTAATAGTATATTAGCGGTGGCAAGTGTGTGTTACTCCCATCCTTC
TTTCCAGTGGCTATTCTGACCACGACAAGATATATTCCGACTTTCCAGAG
GTTTTCGCTATACCTGACGATGAGACGTCACGGGGAGAGCATTTTTATGC
GGAAGCAGAGCGATTGTGGAACGCGGAGGAAGGCCGCGCTTCTCTGGCCA
ATATTCAAGCTGTGGCCCTAATGAGTCGTTTGTATGGCTTTTGCAAAGAA
ACCCCTTTCTTTTTTTTTTACACAACCAAATCTGGACAGACGCTGACTAG
TTGAAGTTTGAAATTCCGAGGTAAAGACGATTTGAGCTGGCTGATGCTCA
GGCAAGCTGTACAGCTCGCACAGGACTTCGGCATGTTCGCGTCTCCGAGG
ACGAGACACCGCCAGTGGGAGAAGATGTCTCTTAGACTGCAGCATGCCTG
TGCAATCACTGCTTGGGGTCTCTTTATCTTGAACTCGTATGGCTGTATCC
CGACGTAAATCGGCCTAACTAACCGTCTTTATCCTGCAGGCAAATGTCCT
TGCATAGTCGCAAGATTGCAGAGTTGAAGCCACCGAAATACAAGCCTTAT
CCCCAAACTGCACTCGATGATAAAATCATGTGGACACCGTATCCTCGCTT
CAATGAAGTCGACCACATTAAAAAACCGGCATATCTACGATTTGTCATGA
CCAAATTGATCGATTTGACCGAAATTGTCGCGGACATACCGGATCTGCTG
TTCGACAAAGGGATTGACATGGCAATTGGCGAATTGTGGATAGCGGCAAA
TAAGAAATGCGTTCGCTTGCAACGATGGCTTGACAGTCTTCCGAACGACA
TCGAAAACGACGATGAGAAACCGCCACAGATCTTATACCTGTAG back to topCoding sequence (CDS) from alignment at An02:1442152..1443945+ >CBS51388_001711-T1 ID=CBS51388_001711-T1|Name=CBS51388_001711-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7095bp|location=Sequence derived from alignment at An02:1442152..1443945+ (Aspergillus niger CBS 513.88)
ATGAATTCCGAAACCCCAGGCAAACATCTTCCCTCCCTGGCCCCAGGGCC
CCGCGGCCCTGTTGCAACTGGTTCAACCACATTGGCTAAGTCGAGGAAGA
ACTCGACCGCATGTTTGCCATGCAAGCAGGCAAAGCGAAAGTGCAGCGGA
CGCCCGCCACCTTGCAAAGCATGCCAAAACACCGGGGGATGCATATTCGA
TGAGACGCTCGACCTTAGGCGGAAGGTCGCTGCGAGGCGCACCCAAGGGG
AGCTAGAGTACTACCGAGGCCTGCTATACTCGCTTCTCGAGACGCTTCGA
TCCTCAGACGAAGAAAAAGCGCGGCAGATGTTGGAAAAGATCCGTGGGAA
TGCTCAATTGAATGACCTCGTCACTGTTATTGACGCATCAGTCACTGACT
TCAGTGATGCAAGTTCAGAGCACTCTAAAAGCGTCGGACCCGCGGAAGAT
ATCCCATCACAGCACGAGCGCCCAGTCGTCGATGCCCACTTGCGGATAAC
AGTGGAGAAGCTATGTGATAGTCCCTTGTTTCAAGTACCTTCCGGACCTT
GGACAGCTGTGACTAAGGATGACCATATCGTTTCGCACCTAATATCGCTA
TACTTCACTTGGGACCATCCATTATTGCAGGTCTTGGATCAAGAGATGTT
CCTGGAACATATGTCTACCAAAGAAACCGACCCGAATTGCTGCACCTCGC
TGCTTGTTAATAGTATATTAGCGGTGGCAAGTATATATTCCGACTTTCCA
GAGGTTTTCGCTATACCTGACGATGAGACGTCACGGGGAGAGCATTTTTA
TGCGGAAGCAGAGCGATTGTGGAACGCGGAGGAAGGCCGCGCTTCTCTGG
CCAATATTCAAGCTGTGGCCCTAATGAGTCGTTTTTTGAAATTCCGAGGT
AAAGACGATTTGAGCTGGCTGATGCTCAGGCAAGCTGTACAGCTCGCACA
GGACTTCGGCATGTTCGCGTCTCCGAGGACGAGACACCGCCAGTGGGAGA
AGATGTCTCTTAGACTGCAGCATGCCTGTGCAATCACTGCTTGGGGTCTC
TTTATCTTGAACTCGCAAATGTCCTTGCATAGTCGCAAGATTGCAGAGTT
GAAGCCACCGAAATACAAGCCTTATCCCCAAACTGCACTCGATGATAAAA
TCATGTGGACACCGTATCCTCGCTTCAATGAAGTCGACCACATTAAAAAA
CCGGCATATCTACGATTTGTCATGACCAAATTGATCGATTTGACCGAAAT
TGTCGCGGACATACCGGATCTGCTGTTCGACAAAGGGATTGACATGGCAA
TTGGCGAATTGTGGATAGCGGCAAATAAGAAATGCGTTCGCTTGCAACGA
TGGCTTGACAGTCTTCCGAACGACATCGAAAACGACGATGAGAAACCGCC
ACAGATCTTATACCTGTAGATGAATTCCGAAACCCCAGGCAAACATCTTC
CCTCCCTGGCCCCAGGGCCCCGCGGCCCTGTTGCAACTGGTTCAACCACA
TTGGCTAAGTCGAGGAAGAACTCGACCGCATGTTTGCCATGCAAGCAGGC
AAAGCGAAAGTGCAGCGGACGCCCGCCACCTTGCAAAGCATGCCAAAACA
CCGGGGGATGCATATTCGATGAGACGCTCGACCTTAGGCGGAAGGTCGCT
GCGAGGCGCACCCAAGGGGAGCTAGAGTACTACCGAGGCCTGCTATACTC
GCTTCTCGAGACGCTTCGATCCTCAGACGAAGAAAAAGCGCGGCAGATGT
TGGAAAAGATCCGTGGGAATGCTCAATTGAATGACCTCGTCACTGTTATT
GACGCATCAGTCACTGACTTCAGTGATGCAAGTTCAGAGCACTCTAAAAG
CGTCGGACCCGCGGAAGATATCCCATCACAGCACGAGCGCCCAGTCGTCG
ATGCCCACTTGCGGATAACAGTGGAGAAGCTATGTGATAGTCCCTTGTTT
CAAGTACCTTCCGGACCTTGGACAGCTGTGACTAAGGATGACCATATCGT
TTCGCACCTAATATCGCTATACTTCACTTGGGACCATCCATTATTGCAGG
TCTTGGATCAAGAGATGTTCCTGGAACATATGTCTACCAAAGAAACCGAC
CCGAATTGCTGCACCTCGCTGCTTGTTAATAGTATATTAGCGGTGGCAAG
TATATATTCCGACTTTCCAGAGGTTTTCGCTATACCTGACGATGAGACGT
CACGGGGAGAGCATTTTTATGCGGAAGCAGAGCGATTGTGGAACGCGGAG
GAAGGCCGCGCTTCTCTGGCCAATATTCAAGCTGTGGCCCTAATGAGTCG
TTTTTTGAAATTCCGAGGTAAAGACGATTTGAGCTGGCTGATGCTCAGGC
AAGCTGTACAGCTCGCACAGGACTTCGGCATGTTCGCGTCTCCGAGGACG
AGACACCGCCAGTGGGAGAAGATGTCTCTTAGACTGCAGCATGCCTGTGC
AATCACTGCTTGGGGTCTCTTTATCTTGAACTCGCAAATGTCCTTGCATA
GTCGCAAGATTGCAGAGTTGAAGCCACCGAAATACAAGCCTTATCCCCAA
ACTGCACTCGATGATAAAATCATGTGGACACCGTATCCTCGCTTCAATGA
AGTCGACCACATTAAAAAACCGGCATATCTACGATTTGTCATGACCAAAT
TGATCGATTTGACCGAAATTGTCGCGGACATACCGGATCTGCTGTTCGAC
AAAGGGATTGACATGGCAATTGGCGAATTGTGGATAGCGGCAAATAAGAA
ATGCGTTCGCTTGCAACGATGGCTTGACAGTCTTCCGAACGACATCGAAA
ACGACGATGAGAAACCGCCACAGATCTTATACCTGTAGATGAATTCCGAA
ACCCCAGGCAAACATCTTCCCTCCCTGGCCCCAGGGCCCCGCGGCCCTGT
TGCAACTGGTTCAACCACATTGGCTAAGTCGAGGAAGAACTCGACCGCAT
GTTTGCCATGCAAGCAGGCAAAGCGAAAGTGCAGCGGACGCCCGCCACCT
TGCAAAGCATGCCAAAACACCGGGGGATGCATATTCGATGAGACGCTCGA
CCTTAGGCGGAAGGTCGCTGCGAGGCGCACCCAAGGGGAGCTAGAGTACT
ACCGAGGCCTGCTATACTCGCTTCTCGAGACGCTTCGATCCTCAGACGAA
GAAAAAGCGCGGCAGATGTTGGAAAAGATCCGTGGGAATGCTCAATTGAA
TGACCTCGTCACTGTTATTGACGCATCAGTCACTGACTTCAGTGATGCAA
GTTCAGAGCACTCTAAAAGCGTCGGACCCGCGGAAGATATCCCATCACAG
CACGAGCGCCCAGTCGTCGATGCCCACTTGCGGATAACAGTGGAGAAGCT
ATGTGATAGTCCCTTGTTTCAAGTACCTTCCGGACCTTGGACAGCTGTGA
CTAAGGATGACCATATCGTTTCGCACCTAATATCGCTATACTTCACTTGG
GACCATCCATTATTGCAGGTCTTGGATCAAGAGATGTTCCTGGAACATAT
GTCTACCAAAGAAACCGACCCGAATTGCTGCACCTCGCTGCTTGTTAATA
GTATATTAGCGGTGGCAAGTATATATTCCGACTTTCCAGAGGTTTTCGCT
ATACCTGACGATGAGACGTCACGGGGAGAGCATTTTTATGCGGAAGCAGA
GCGATTGTGGAACGCGGAGGAAGGCCGCGCTTCTCTGGCCAATATTCAAG
CTGTGGCCCTAATGAGTCGTTTTTTGAAATTCCGAGGTAAAGACGATTTG
AGCTGGCTGATGCTCAGGCAAGCTGTACAGCTCGCACAGGACTTCGGCAT
GTTCGCGTCTCCGAGGACGAGACACCGCCAGTGGGAGAAGATGTCTCTTA
GACTGCAGCATGCCTGTGCAATCACTGCTTGGGGTCTCTTTATCTTGAAC
TCGCAAATGTCCTTGCATAGTCGCAAGATTGCAGAGTTGAAGCCACCGAA
ATACAAGCCTTATCCCCAAACTGCACTCGATGATAAAATCATGTGGACAC
CGTATCCTCGCTTCAATGAAGTCGACCACATTAAAAAACCGGCATATCTA
CGATTTGTCATGACCAAATTGATCGATTTGACCGAAATTGTCGCGGACAT
ACCGGATCTGCTGTTCGACAAAGGGATTGACATGGCAATTGGCGAATTGT
GGATAGCGGCAAATAAGAAATGCGTTCGCTTGCAACGATGGCTTGACAGT
CTTCCGAACGACATCGAAAACGACGATGAGAAACCGCCACAGATCTTATA
CCTGTAGATGAATTCCGAAACCCCAGGCAAACATCTTCCCTCCCTGGCCC
CAGGGCCCCGCGGCCCTGTTGCAACTGGTTCAACCACATTGGCTAAGTCG
AGGAAGAACTCGACCGCATGTTTGCCATGCAAGCAGGCAAAGCGAAAGTG
CAGCGGACGCCCGCCACCTTGCAAAGCATGCCAAAACACCGGGGGATGCA
TATTCGATGAGACGCTCGACCTTAGGCGGAAGGTCGCTGCGAGGCGCACC
CAAGGGGAGCTAGAGTACTACCGAGGCCTGCTATACTCGCTTCTCGAGAC
GCTTCGATCCTCAGACGAAGAAAAAGCGCGGCAGATGTTGGAAAAGATCC
GTGGGAATGCTCAATTGAATGACCTCGTCACTGTTATTGACGCATCAGTC
ACTGACTTCAGTGATGCAAGTTCAGAGCACTCTAAAAGCGTCGGACCCGC
GGAAGATATCCCATCACAGCACGAGCGCCCAGTCGTCGATGCCCACTTGC
GGATAACAGTGGAGAAGCTATGTGATAGTCCCTTGTTTCAAGTACCTTCC
GGACCTTGGACAGCTGTGACTAAGGATGACCATATCGTTTCGCACCTAAT
ATCGCTATACTTCACTTGGGACCATCCATTATTGCAGGTCTTGGATCAAG
AGATGTTCCTGGAACATATGTCTACCAAAGAAACCGACCCGAATTGCTGC
ACCTCGCTGCTTGTTAATAGTATATTAGCGGTGGCAAGTATATATTCCGA
CTTTCCAGAGGTTTTCGCTATACCTGACGATGAGACGTCACGGGGAGAGC
ATTTTTATGCGGAAGCAGAGCGATTGTGGAACGCGGAGGAAGGCCGCGCT
TCTCTGGCCAATATTCAAGCTGTGGCCCTAATGAGTCGTTTTTTGAAATT
CCGAGGTAAAGACGATTTGAGCTGGCTGATGCTCAGGCAAGCTGTACAGC
TCGCACAGGACTTCGGCATGTTCGCGTCTCCGAGGACGAGACACCGCCAG
TGGGAGAAGATGTCTCTTAGACTGCAGCATGCCTGTGCAATCACTGCTTG
GGGTCTCTTTATCTTGAACTCGCAAATGTCCTTGCATAGTCGCAAGATTG
CAGAGTTGAAGCCACCGAAATACAAGCCTTATCCCCAAACTGCACTCGAT
GATAAAATCATGTGGACACCGTATCCTCGCTTCAATGAAGTCGACCACAT
TAAAAAACCGGCATATCTACGATTTGTCATGACCAAATTGATCGATTTGA
CCGAAATTGTCGCGGACATACCGGATCTGCTGTTCGACAAAGGGATTGAC
ATGGCAATTGGCGAATTGTGGATAGCGGCAAATAAGAAATGCGTTCGCTT
GCAACGATGGCTTGACAGTCTTCCGAACGACATCGAAAACGACGATGAGA
AACCGCCACAGATCTTATACCTGTAGATGAATTCCGAAACCCCAGGCAAA
CATCTTCCCTCCCTGGCCCCAGGGCCCCGCGGCCCTGTTGCAACTGGTTC
AACCACATTGGCTAAGTCGAGGAAGAACTCGACCGCATGTTTGCCATGCA
AGCAGGCAAAGCGAAAGTGCAGCGGACGCCCGCCACCTTGCAAAGCATGC
CAAAACACCGGGGGATGCATATTCGATGAGACGCTCGACCTTAGGCGGAA
GGTCGCTGCGAGGCGCACCCAAGGGGAGCTAGAGTACTACCGAGGCCTGC
TATACTCGCTTCTCGAGACGCTTCGATCCTCAGACGAAGAAAAAGCGCGG
CAGATGTTGGAAAAGATCCGTGGGAATGCTCAATTGAATGACCTCGTCAC
TGTTATTGACGCATCAGTCACTGACTTCAGTGATGCAAGTTCAGAGCACT
CTAAAAGCGTCGGACCCGCGGAAGATATCCCATCACAGCACGAGCGCCCA
GTCGTCGATGCCCACTTGCGGATAACAGTGGAGAAGCTATGTGATAGTCC
CTTGTTTCAAGTACCTTCCGGACCTTGGACAGCTGTGACTAAGGATGACC
ATATCGTTTCGCACCTAATATCGCTATACTTCACTTGGGACCATCCATTA
TTGCAGGTCTTGGATCAAGAGATGTTCCTGGAACATATGTCTACCAAAGA
AACCGACCCGAATTGCTGCACCTCGCTGCTTGTTAATAGTATATTAGCGG
TGGCAAGTATATATTCCGACTTTCCAGAGGTTTTCGCTATACCTGACGAT
GAGACGTCACGGGGAGAGCATTTTTATGCGGAAGCAGAGCGATTGTGGAA
CGCGGAGGAAGGCCGCGCTTCTCTGGCCAATATTCAAGCTGTGGCCCTAA
TGAGTCGTTTTTTGAAATTCCGAGGTAAAGACGATTTGAGCTGGCTGATG
CTCAGGCAAGCTGTACAGCTCGCACAGGACTTCGGCATGTTCGCGTCTCC
GAGGACGAGACACCGCCAGTGGGAGAAGATGTCTCTTAGACTGCAGCATG
CCTGTGCAATCACTGCTTGGGGTCTCTTTATCTTGAACTCGCAAATGTCC
TTGCATAGTCGCAAGATTGCAGAGTTGAAGCCACCGAAATACAAGCCTTA
TCCCCAAACTGCACTCGATGATAAAATCATGTGGACACCGTATCCTCGCT
TCAATGAAGTCGACCACATTAAAAAACCGGCATATCTACGATTTGTCATG
ACCAAATTGATCGATTTGACCGAAATTGTCGCGGACATACCGGATCTGCT
GTTCGACAAAGGGATTGACATGGCAATTGGCGAATTGTGGATAGCGGCAA
ATAAGAAATGCGTTCGCTTGCAACGATGGCTTGACAGTCTTCCGAACGAC
ATCGAAAACGACGATGAGAAACCGCCACAGATCTTATACCTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR007219 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:1442152..1443945 + |
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