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CBS51388_001754-T1, CBS51388_001754-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001754-T1
Unique NameCBS51388_001754-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:1593129..1594757-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001754-T1 ID=CBS51388_001754-T1|Name=CBS51388_001754-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1629bp|location=Sequence derived from alignment at An02:1593129..1594757- (Aspergillus niger CBS 513.88)
ATGGCGCCCTCCAGCTCTCCAGAACCTGTTGTGGACGAATCCCACGAGTC
CTCTGACTCGGAGGTCGAGCAGACCGAACTGCAATCCCGCGCCCCCAAGA
GAAGACGTCTCTCGGAGTCTTCCACCGACTCCTACGTTGCTCCGGCGCCG
CTCCCCACACTCTCCCGTATCAAGAAGAAGGGCGCAGATGAAGAGAATAA
GCCCGCCACATCGGATAAAGACGAGCCTGTCCTGATCAAGGATGCTCTGG
AGATTGGTCTCAATGATGCGCAGAACTCATTCGCCTCTCTCAACGTGGCG
CCGTGGTTGATCGGCTCCCTAACCACCATGGCTGTTCGCAAACCAACCGC
CATTCAAAAAGCGTGTATTCCTGAGATCCTAAACGGCCGGGACTGCATTG
GTGGAAGCCGGACTGGTTCCGGTAAGACCATTGCCTTCTCAGTGCCCATG
CTGCAGAAATGGGCGGAGGATCCATTCGGTATCTTCGGCCTTGTCCTCAC
TCCAACTCGGTAAGAACCTATCCCCCACTCCCAATGCCCATCATTCATCA
TCTAATCCGATGTGCCTAGTGAACTTGCCCTCCAAATCTACGAACAAATC
AAAGCCATCTCCGCCCCCCAAAGCATGAAACCCCTCCTCATCACCGGCGG
CACCGACATGCGCCCACAAGCCGTGGCCCTCGCACAACGCCCACACGTCG
TGATCGCCACGCCCGGCCGTCTCGCCGACCACATCAACACCTCCGGCTCC
GACACCATCCGCGGCCTGAAGCGCGTCCGCATGGTCGTTCTCGACGAAGC
AGACCGGCTCCTCGCCCCAGGACACGGCAGCATGCTCCCGGACGTGGAAA
CCTGCCTCTCAGCTCTCCCACCCTCCAGCGAGCGCCAAACCCTCCTCTTC
ACAGCAACCCTAACACCGGAAGTGCGCGCGCTGAAATCCATGCCCCGGCC
GTCCACCAAACCCCCCATCTTCGTCACCGAAATCTCCACCGAAAACAACG
CCTCTATCCCCCCGACCCTTAAACAAACCTACCTCAAAGTCCCCATGACC
CACCGCGAAGCCTTCCTCCACGTCCTCCTCTCCACGGAAGCGAACGCCTC
CAAACCAGCCATCATCTTCTGCAACCACACCAAGACGGCGGACTTGCTGG
AGCGCATGCTCCGCAGGCTGTCTCACCGCGTTACATCCCTGCATAGTCTG
CTGCCGCAGTCGGAGCGCAATGCCAATCTGGCGAGGTTCAGAGCGTCCGC
GGCGAGGTTGCTCGTTGCGACGGATGTGGCGTCCCGTGGTTTGGATATTC
CGTCGGTGGAGTTGGTGGTCAATTTTGATGTGCCCAGGAATCCGGATGAT
TATGTGCATCGGGTTGGTCGAACGGCGCGTGCAGGGAGAAAGGGTGAGTC
GGTCACGCTTGTTGGGCAACGGGATGTGAGTCTGGTGTTGGCGATTGAGG
AGAGGGTGGGTAGGCAGATGGAGGAGTGGAGTGAGGAGGGTGTTAGTGTT
GAGGGTAGGGTTGTTAGGACGGGTGTGTTGAAGGAGGTTGGTGAGGCCAA
GAGAGAGGCTGCGGGTGAGATTGAGGAGGGGAGAGATGTGTTGGGAAGGA
AGAGGAATAAGTTGAAGAAGGTGCGGTAG
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Coding sequence (CDS) from alignment at An02:1593129..1594757-

>CBS51388_001754-T1 ID=CBS51388_001754-T1|Name=CBS51388_001754-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3138bp|location=Sequence derived from alignment at An02:1593129..1594757- (Aspergillus niger CBS 513.88)
TGAACTTGCCCTCCAAATCTACGAACAAATCAAAGCCATCTCCGCCCCCC
AAAGCATGAAACCCCTCCTCATCACCGGCGGCACCGACATGCGCCCACAA
GCCGTGGCCCTCGCACAACGCCCACACGTCGTGATCGCCACGCCCGGCCG
TCTCGCCGACCACATCAACACCTCCGGCTCCGACACCATCCGCGGCCTGA
AGCGCGTCCGCATGGTCGTTCTCGACGAAGCAGACCGGCTCCTCGCCCCA
GGACACGGCAGCATGCTCCCGGACGTGGAAACCTGCCTCTCAGCTCTCCC
ACCCTCCAGCGAGCGCCAAACCCTCCTCTTCACAGCAACCCTAACACCGG
AAGTGCGCGCGCTGAAATCCATGCCCCGGCCGTCCACCAAACCCCCCATC
TTCGTCACCGAAATCTCCACCGAAAACAACGCCTCTATCCCCCCGACCCT
TAAACAAACCTACCTCAAAGTCCCCATGACCCACCGCGAAGCCTTCCTCC
ACGTCCTCCTCTCCACGGAAGCGAACGCCTCCAAACCAGCCATCATCTTC
TGCAACCACACCAAGACGGCGGACTTGCTGGAGCGCATGCTCCGCAGGCT
GTCTCACCGCGTTACATCCCTGCATAGTCTGCTGCCGCAGTCGGAGCGCA
ATGCCAATCTGGCGAGGTTCAGAGCGTCCGCGGCGAGGTTGCTCGTTGCG
ACGGATGTGGCGTCCCGTGGTTTGGATATTCCGTCGGTGGAGTTGGTGGT
CAATTTTGATGTGCCCAGGAATCCGGATGATTATGTGCATCGGGTTGGTC
GAACGGCGCGTGCAGGGAGAAAGGGTGAGTCGGTCACGCTTGTTGGGCAA
CGGGATGTGAGTCTGGTGTTGGCGATTGAGGAGAGGGTGGGTAGGCAGAT
GGAGGAGTGGAGTGAGGAGGGTGTTAGTGTTGAGGGTAGGGTTGTTAGGA
CGGGTGTGTTGAAGGAGGTTGGTGAGGCCAAGAGAGAGGCTGCGGGTGAG
ATTGAGGAGGGGAGAGATGTGTTGGGAAGGAAGAGGAATAAGTTGAAGAA
GGTGCGGTAGATGGCGCCCTCCAGCTCTCCAGAACCTGTTGTGGACGAAT
CCCACGAGTCCTCTGACTCGGAGGTCGAGCAGACCGAACTGCAATCCCGC
GCCCCCAAGAGAAGACGTCTCTCGGAGTCTTCCACCGACTCCTACGTTGC
TCCGGCGCCGCTCCCCACACTCTCCCGTATCAAGAAGAAGGGCGCAGATG
AAGAGAATAAGCCCGCCACATCGGATAAAGACGAGCCTGTCCTGATCAAG
GATGCTCTGGAGATTGGTCTCAATGATGCGCAGAACTCATTCGCCTCTCT
CAACGTGGCGCCGTGGTTGATCGGCTCCCTAACCACCATGGCTGTTCGCA
AACCAACCGCCATTCAAAAAGCGTGTATTCCTGAGATCCTAAACGGCCGG
GACTGCATTGGTGGAAGCCGGACTGGTTCCGGTAAGACCATTGCCTTCTC
AGTGCCCATGCTGCAGAAATGGGCGGAGGATCCATTCGGTATCTTCGGCC
TTGTCCTCACTCCAACTCGTGAACTTGCCCTCCAAATCTACGAACAAATC
AAAGCCATCTCCGCCCCCCAAAGCATGAAACCCCTCCTCATCACCGGCGG
CACCGACATGCGCCCACAAGCCGTGGCCCTCGCACAACGCCCACACGTCG
TGATCGCCACGCCCGGCCGTCTCGCCGACCACATCAACACCTCCGGCTCC
GACACCATCCGCGGCCTGAAGCGCGTCCGCATGGTCGTTCTCGACGAAGC
AGACCGGCTCCTCGCCCCAGGACACGGCAGCATGCTCCCGGACGTGGAAA
CCTGCCTCTCAGCTCTCCCACCCTCCAGCGAGCGCCAAACCCTCCTCTTC
ACAGCAACCCTAACACCGGAAGTGCGCGCGCTGAAATCCATGCCCCGGCC
GTCCACCAAACCCCCCATCTTCGTCACCGAAATCTCCACCGAAAACAACG
CCTCTATCCCCCCGACCCTTAAACAAACCTACCTCAAAGTCCCCATGACC
CACCGCGAAGCCTTCCTCCACGTCCTCCTCTCCACGGAAGCGAACGCCTC
CAAACCAGCCATCATCTTCTGCAACCACACCAAGACGGCGGACTTGCTGG
AGCGCATGCTCCGCAGGCTGTCTCACCGCGTTACATCCCTGCATAGTCTG
CTGCCGCAGTCGGAGCGCAATGCCAATCTGGCGAGGTTCAGAGCGTCCGC
GGCGAGGTTGCTCGTTGCGACGGATGTGGCGTCCCGTGGTTTGGATATTC
CGTCGGTGGAGTTGGTGGTCAATTTTGATGTGCCCAGGAATCCGGATGAT
TATGTGCATCGGGTTGGTCGAACGGCGCGTGCAGGGAGAAAGGGTGAGTC
GGTCACGCTTGTTGGGCAACGGGATGTGAGTCTGGTGTTGGCGATTGAGG
AGAGGGTGGGTAGGCAGATGGAGGAGTGGAGTGAGGAGGGTGTTAGTGTT
GAGGGTAGGGTTGTTAGGACGGGTGTGTTGAAGGAGGTTGGTGAGGCCAA
GAGAGAGGCTGCGGGTGAGATTGAGGAGGGGAGAGATGTGTTGGGAAGGA
AGAGGAATAAGTTGAAGAAGGTGCGGTAGATGGCGCCCTCCAGCTCTCCA
GAACCTGTTGTGGACGAATCCCACGAGTCCTCTGACTCGGAGGTCGAGCA
GACCGAACTGCAATCCCGCGCCCCCAAGAGAAGACGTCTCTCGGAGTCTT
CCACCGACTCCTACGTTGCTCCGGCGCCGCTCCCCACACTCTCCCGTATC
AAGAAGAAGGGCGCAGATGAAGAGAATAAGCCCGCCACATCGGATAAAGA
CGAGCCTGTCCTGATCAAGGATGCTCTGGAGATTGGTCTCAATGATGCGC
AGAACTCATTCGCCTCTCTCAACGTGGCGCCGTGGTTGATCGGCTCCCTA
ACCACCATGGCTGTTCGCAAACCAACCGCCATTCAAAAAGCGTGTATTCC
TGAGATCCTAAACGGCCGGGACTGCATTGGTGGAAGCCGGACTGGTTCCG
GTAAGACCATTGCCTTCTCAGTGCCCATGCTGCAGAAATGGGCGGAGGAT
CCATTCGGTATCTTCGGCCTTGTCCTCACTCCAACTCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DBP8CBS51388_001754Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001754-T1CBS51388_001754-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001754-T1.cdsCBS51388_001754-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001754-T1.exon2CBS51388_001754-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001754-T1.exon1CBS51388_001754-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014014
DBxrefInterPro:IPR000629
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR014001
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
ProductPutative RNA helicase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:1593129..1594757 -
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