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CBS51388_001756-T1, CBS51388_001756-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001756-T1
Unique NameCBS51388_001756-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:1599346..1600376+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001756-T1 ID=CBS51388_001756-T1|Name=CBS51388_001756-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1031bp|location=Sequence derived from alignment at An02:1599346..1600376+ (Aspergillus niger CBS 513.88)
ATGTCGGTCGTTTCTCTTCTTGGCGTGAAAATCGTCAATAATCCTGCCTC
TTTCCTCGACCCCTATCAATTTGAGATCACTTTCGAATGTCTTGAACAGC
TGCAGAAAGGTACACTGTGAACCCCGCTCCCGTTAATTGGCCGCCACTAA
CGAGTTTCCAGATCTGGAGTGGAAGCTCACCTACGTCGGTTCGGCGACAT
CGTAAGTTGGACCTGAAGCGAGATAAAATCAGATCTATCTGCTAACCACC
TGTTTCTCTAGCTCCGAGTATGACCAGGAACTCGACTCCCTGCTGGTGGG
ACCGATCCCCGTTGGTGTCAACAAGTTCATCTTCGAGGCCGACCCCCCAG
ACCTCAAGCGCATCCCTACTTCCGAAATCCTGGGAGTTACCGTGATTCTC
CTCACTTGCAGCTATGACGGCAGAGAATTCGTTCGTGTCGGTTACTATGT
AAACAACGAATACGATTCCGAGGAGCTTATGGAGCAGCCGCCGGCTCGGC
CGATCATCGAACGCATTCGTCGGAATATCCTTGCTGAGAAGCCCAGAGTA
ACCCGGTTTGCCATCAAATGGTAGGTATCATCTATTTGTTTTTCTTGTCA
TACGATACTAATAACTACCGCCTAGGGACTCGGAGGAATCTGCTCCCGCT
GAATACCCGCCAGATCAGCCCGAAGCCGACCAGGAGGGAGATGACAGTGC
CGCCTACGGTGCAGAGGAAGCAGAGCTCGAAGCAGCCCTCTTCAAGGAGC
TCAACGAGCTGGAGCCTAAGACCGAAGATCAGGAGATGGAGGGAACCGAA
GGCCCTGCCACCAAGGAAGAAGAGGAGGAAGATATCTCGGATGCCGAGTC
TGAGGACATCGAAGATGAGAGTGACGAAGATGAGGAGGAACTCGACGAGG
AAGAGGGCGACGACGGCGATGAGGACGTCGAAATGGGCGATGATTCCGAG
CAGAAGGATGAATCAGCCGGAGGCGCCAGCAACAACAACCCGGCGGCCCA
TCAACAACAGCCCGAGTTGATGGTGCACTAA
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Coding sequence (CDS) from alignment at An02:1599346..1600376+

>CBS51388_001756-T1 ID=CBS51388_001756-T1|Name=CBS51388_001756-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3456bp|location=Sequence derived from alignment at An02:1599346..1600376+ (Aspergillus niger CBS 513.88)
ATGTCGGTCGTTTCTCTTCTTGGCGTGAAAATCGTCAATAATCCTGCCTC
TTTCCTCGACCCCTATCAATTTGAGATCACTTTCGAATGTCTTGAACAGC
TGCAGAAAGATCTGGAGTGGAAGCTCACCTACGTCGGTTCGGCGACATCC
TCCGAGTATGACCAGGAACTCGACTCCCTGCTGGTGGGACCGATCCCCGT
TGGTGTCAACAAGTTCATCTTCGAGGCCGACCCCCCAGACCTCAAGCGCA
TCCCTACTTCCGAAATCCTGGGAGTTACCGTGATTCTCCTCACTTGCAGC
TATGACGGCAGAGAATTCGTTCGTGTCGGTTACTATGTAAACAACGAATA
CGATTCCGAGGAGCTTATGGAGCAGCCGCCGGCTCGGCCGATCATCGAAC
GCATTCGTCGGAATATCCTTGCTGAGAAGCCCAGAGTAACCCGGTTTGCC
ATCAAATGGGACTCGGAGGAATCTGCTCCCGCTGAATACCCGCCAGATCA
GCCCGAAGCCGACCAGGAGGGAGATGACAGTGCCGCCTACGGTGCAGAGG
AAGCAGAGCTCGAAGCAGCCCTCTTCAAGGAGCTCAACGAGCTGGAGCCT
AAGACCGAAGATCAGGAGATGGAGGGAACCGAAGGCCCTGCCACCAAGGA
AGAAGAGGAGGAAGATATCTCGGATGCCGAGTCTGAGGACATCGAAGATG
AGAGTGACGAAGATGAGGAGGAACTCGACGAGGAAGAGGGCGACGACGGC
GATGAGGACGTCGAAATGGGCGATGATTCCGAGCAGAAGGATGAATCAGC
CGGAGGCGCCAGCAACAACAACCCGGCGGCCCATCAACAACAGCCCGAGT
TGATGGTGCACTAAATGTCGGTCGTTTCTCTTCTTGGCGTGAAAATCGTC
AATAATCCTGCCTCTTTCCTCGACCCCTATCAATTTGAGATCACTTTCGA
ATGTCTTGAACAGCTGCAGAAAGATCTGGAGTGGAAGCTCACCTACGTCG
GTTCGGCGACATCCTCCGAGTATGACCAGGAACTCGACTCCCTGCTGGTG
GGACCGATCCCCGTTGGTGTCAACAAGTTCATCTTCGAGGCCGACCCCCC
AGACCTCAAGCGCATCCCTACTTCCGAAATCCTGGGAGTTACCGTGATTC
TCCTCACTTGCAGCTATGACGGCAGAGAATTCGTTCGTGTCGGTTACTAT
GTAAACAACGAATACGATTCCGAGGAGCTTATGGAGCAGCCGCCGGCTCG
GCCGATCATCGAACGCATTCGTCGGAATATCCTTGCTGAGAAGCCCAGAG
TAACCCGGTTTGCCATCAAATGGGACTCGGAGGAATCTGCTCCCGCTGAA
TACCCGCCAGATCAGCCCGAAGCCGACCAGGAGGGAGATGACAGTGCCGC
CTACGGTGCAGAGGAAGCAGAGCTCGAAGCAGCCCTCTTCAAGGAGCTCA
ACGAGCTGGAGCCTAAGACCGAAGATCAGGAGATGGAGGGAACCGAAGGC
CCTGCCACCAAGGAAGAAGAGGAGGAAGATATCTCGGATGCCGAGTCTGA
GGACATCGAAGATGAGAGTGACGAAGATGAGGAGGAACTCGACGAGGAAG
AGGGCGACGACGGCGATGAGGACGTCGAAATGGGCGATGATTCCGAGCAG
AAGGATGAATCAGCCGGAGGCGCCAGCAACAACAACCCGGCGGCCCATCA
ACAACAGCCCGAGTTGATGGTGCACTAAATGTCGGTCGTTTCTCTTCTTG
GCGTGAAAATCGTCAATAATCCTGCCTCTTTCCTCGACCCCTATCAATTT
GAGATCACTTTCGAATGTCTTGAACAGCTGCAGAAAGATCTGGAGTGGAA
GCTCACCTACGTCGGTTCGGCGACATCCTCCGAGTATGACCAGGAACTCG
ACTCCCTGCTGGTGGGACCGATCCCCGTTGGTGTCAACAAGTTCATCTTC
GAGGCCGACCCCCCAGACCTCAAGCGCATCCCTACTTCCGAAATCCTGGG
AGTTACCGTGATTCTCCTCACTTGCAGCTATGACGGCAGAGAATTCGTTC
GTGTCGGTTACTATGTAAACAACGAATACGATTCCGAGGAGCTTATGGAG
CAGCCGCCGGCTCGGCCGATCATCGAACGCATTCGTCGGAATATCCTTGC
TGAGAAGCCCAGAGTAACCCGGTTTGCCATCAAATGGGACTCGGAGGAAT
CTGCTCCCGCTGAATACCCGCCAGATCAGCCCGAAGCCGACCAGGAGGGA
GATGACAGTGCCGCCTACGGTGCAGAGGAAGCAGAGCTCGAAGCAGCCCT
CTTCAAGGAGCTCAACGAGCTGGAGCCTAAGACCGAAGATCAGGAGATGG
AGGGAACCGAAGGCCCTGCCACCAAGGAAGAAGAGGAGGAAGATATCTCG
GATGCCGAGTCTGAGGACATCGAAGATGAGAGTGACGAAGATGAGGAGGA
ACTCGACGAGGAAGAGGGCGACGACGGCGATGAGGACGTCGAAATGGGCG
ATGATTCCGAGCAGAAGGATGAATCAGCCGGAGGCGCCAGCAACAACAAC
CCGGCGGCCCATCAACAACAGCCCGAGTTGATGGTGCACTAAATGTCGGT
CGTTTCTCTTCTTGGCGTGAAAATCGTCAATAATCCTGCCTCTTTCCTCG
ACCCCTATCAATTTGAGATCACTTTCGAATGTCTTGAACAGCTGCAGAAA
GATCTGGAGTGGAAGCTCACCTACGTCGGTTCGGCGACATCCTCCGAGTA
TGACCAGGAACTCGACTCCCTGCTGGTGGGACCGATCCCCGTTGGTGTCA
ACAAGTTCATCTTCGAGGCCGACCCCCCAGACCTCAAGCGCATCCCTACT
TCCGAAATCCTGGGAGTTACCGTGATTCTCCTCACTTGCAGCTATGACGG
CAGAGAATTCGTTCGTGTCGGTTACTATGTAAACAACGAATACGATTCCG
AGGAGCTTATGGAGCAGCCGCCGGCTCGGCCGATCATCGAACGCATTCGT
CGGAATATCCTTGCTGAGAAGCCCAGAGTAACCCGGTTTGCCATCAAATG
GGACTCGGAGGAATCTGCTCCCGCTGAATACCCGCCAGATCAGCCCGAAG
CCGACCAGGAGGGAGATGACAGTGCCGCCTACGGTGCAGAGGAAGCAGAG
CTCGAAGCAGCCCTCTTCAAGGAGCTCAACGAGCTGGAGCCTAAGACCGA
AGATCAGGAGATGGAGGGAACCGAAGGCCCTGCCACCAAGGAAGAAGAGG
AGGAAGATATCTCGGATGCCGAGTCTGAGGACATCGAAGATGAGAGTGAC
GAAGATGAGGAGGAACTCGACGAGGAAGAGGGCGACGACGGCGATGAGGA
CGTCGAAATGGGCGATGATTCCGAGCAGAAGGATGAATCAGCCGGAGGCG
CCAGCAACAACAACCCGGCGGCCCATCAACAACAGCCCGAGTTGATGGTG
CACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0042393histone binding
Vocabulary: Biological Process
TermDefinition
GO:0006337nucleosome disassembly
GO:0006334nucleosome assembly
GO:0016573histone acetylation
GO:0006333chromatin assembly or disassembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASF1CBS51388_001756Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001756-T1.exon1CBS51388_001756-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_001756-T1.exon2CBS51388_001756-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001756-T1.exon3CBS51388_001756-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_001756-T1.exon4CBS51388_001756-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001756-T1.cdsCBS51388_001756-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001756-T1CBS51388_001756-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264COX
DBxrefInterPro:IPR017282
DBxrefInterPro:IPR006818
DBxrefInterPro:IPR036747
DBxrefPFAM:PF04729
ProductHistone chaperone asf1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:1599346..1600376 +
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