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CBS51388_001783-T1, CBS51388_001783-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001783-T1
Unique NameCBS51388_001783-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:1702533..1704018-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001783-T1 ID=CBS51388_001783-T1|Name=CBS51388_001783-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1486bp|location=Sequence derived from alignment at An02:1702533..1704018- (Aspergillus niger CBS 513.88)
ATGGCAGCCAACGTTCCTCCTTCCGCTGAGACCCTTCTCAGCGGTGCTGC
CGCCCACCCGCCCAAGACCGCTGAAGAGATCGCCAACCAGTATGACCTGC
TGCCCAAGCTGATCCCCTACCTCGACCGCCATCTGGTCTTCCCTCTTCTC
GAGTTCAGCTCCGGCTCCCAGGAAGATGACAAGGAGATGATCCGCGCCAA
GTACGAGCTGTTGAAGCACACCAACATGACCGACTATGTGGCCAACCTGT
GGAAGGAAATTAACGACTCCGACACCATCCCCGACGAGTTCGTCAAGAAG
AGAGAGGAGGTCCTCGCCAAGTTGCAACACTACCAGGAGCAGAGCGCCAA
GATCACCGAGCTGCTGCAGGATGAGGATGTCGTCGGCAACCTGCGCAGCG
ACAAGGTCGCCAACTTGAAGTTCCTCGAGGAGGAGCACGGTGTCACCGCC
GATATGGTCAACAGCCTTTTCGACTATGGTCGCTTCCAGTACAGCTGCGG
TAGTTACGGCAATGCCGCTGAGCTGCTGTACCAGTTCCGTGTCCTCTCCA
CCGACAACGACAAGGTTGCTTCCGCCACATGGGGTAAGCTCGCCTCGGAG
ATTCTGACCACCAGCTGGGATGGTGCTATGGAGGAAGTCCAGAAGGTCAA
GGACTCGATCGAGACCCGTCTCTTCAACAACCCTCTGGGTCAGCTCCAGA
ACCGCTCCTGGTTGATCCACTGGTCTCTCTTCCCCTTCTTCAACTACGAC
CCTGCTCGCGATGTCCTGACCGACCTTTTCTTCTCCCCCGCCTACATCAA
CACCATCCAGACTAGCTGCCCCTGGATCCTGCGCTACCTCGCCGCCGCCG
TCATCACCAACCGCAACCGTGCCCACAAGAACAGCAACGTCTACCAGAAG
CAGTTGAAGGACCTGATCCGCGTCGTTCGCCAGGAGGGCTACGAATACTC
CGACCCCATCACCGACTTCGTTAAGGCGCTGTACGTTGACTTCGACTTTG
AGGAGGCCCAGAAGAAGTTGGGTGAGGCCGAGGATGTGTTGCGGAGCGAC
TTCTTCCTCGTTTCGGCTGCCGATGCCTTCGTTGAGGCTGCCCGTCACCT
GATCTCCGAGAGCTACTGCAAGATCCACCAGCGGATCGACATCAAGTATG
TCAATCAACACGAAGAACATTCATTCACGCATTATCTTGCTAACCGATCA
CACCAGGGACCTGTCTACCCGTCTGGGTCTGAACCAGGATGAGGGTGAGA
AGTGGATCGTCAACCTGATCCGTGACACTCGTGTCGACGCCAAGATTGAC
TACAAGGAGGGCACTGTGATCATGAACCACCCCCCGCAGTCGGTGTACCA
GCAGGTCATTGAGAAGACCAAAGGTGCTTTCTTCCGCACGCAAGTTCTGA
GGTTCGTCCAATACCCTATCCTATCAATCCATCTCCATCCTTTGTTACTA
ACGCCAAAATGATCCAGTGCTGCCGTTGCGAAATAA
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Coding sequence (CDS) from alignment at An02:1702533..1704018-

>CBS51388_001783-T1 ID=CBS51388_001783-T1|Name=CBS51388_001783-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4077bp|location=Sequence derived from alignment at An02:1702533..1704018- (Aspergillus niger CBS 513.88)
TGCTGCCGTTGCGAAATAAGGACCTGTCTACCCGTCTGGGTCTGAACCAG
GATGAGGGTGAGAAGTGGATCGTCAACCTGATCCGTGACACTCGTGTCGA
CGCCAAGATTGACTACAAGGAGGGCACTGTGATCATGAACCACCCCCCGC
AGTCGGTGTACCAGCAGGTCATTGAGAAGACCAAAGGTGCTTTCTTCCGC
ACGCAAGTTCTGAGATGGCAGCCAACGTTCCTCCTTCCGCTGAGACCCTT
CTCAGCGGTGCTGCCGCCCACCCGCCCAAGACCGCTGAAGAGATCGCCAA
CCAGTATGACCTGCTGCCCAAGCTGATCCCCTACCTCGACCGCCATCTGG
TCTTCCCTCTTCTCGAGTTCAGCTCCGGCTCCCAGGAAGATGACAAGGAG
ATGATCCGCGCCAAGTACGAGCTGTTGAAGCACACCAACATGACCGACTA
TGTGGCCAACCTGTGGAAGGAAATTAACGACTCCGACACCATCCCCGACG
AGTTCGTCAAGAAGAGAGAGGAGGTCCTCGCCAAGTTGCAACACTACCAG
GAGCAGAGCGCCAAGATCACCGAGCTGCTGCAGGATGAGGATGTCGTCGG
CAACCTGCGCAGCGACAAGGTCGCCAACTTGAAGTTCCTCGAGGAGGAGC
ACGGTGTCACCGCCGATATGGTCAACAGCCTTTTCGACTATGGTCGCTTC
CAGTACAGCTGCGGTAGTTACGGCAATGCCGCTGAGCTGCTGTACCAGTT
CCGTGTCCTCTCCACCGACAACGACAAGGTTGCTTCCGCCACATGGGGTA
AGCTCGCCTCGGAGATTCTGACCACCAGCTGGGATGGTGCTATGGAGGAA
GTCCAGAAGGTCAAGGACTCGATCGAGACCCGTCTCTTCAACAACCCTCT
GGGTCAGCTCCAGAACCGCTCCTGGTTGATCCACTGGTCTCTCTTCCCCT
TCTTCAACTACGACCCTGCTCGCGATGTCCTGACCGACCTTTTCTTCTCC
CCCGCCTACATCAACACCATCCAGACTAGCTGCCCCTGGATCCTGCGCTA
CCTCGCCGCCGCCGTCATCACCAACCGCAACCGTGCCCACAAGAACAGCA
ACGTCTACCAGAAGCAGTTGAAGGACCTGATCCGCGTCGTTCGCCAGGAG
GGCTACGAATACTCCGACCCCATCACCGACTTCGTTAAGGCGCTGTACGT
TGACTTCGACTTTGAGGAGGCCCAGAAGAAGTTGGGTGAGGCCGAGGATG
TGTTGCGGAGCGACTTCTTCCTCGTTTCGGCTGCCGATGCCTTCGTTGAG
GCTGCCCGTCACCTGATCTCCGAGAGCTACTGCAAGATCCACCAGCGGAT
CGACATCAATGCTGCCGTTGCGAAATAAGGACCTGTCTACCCGTCTGGGT
CTGAACCAGGATGAGGGTGAGAAGTGGATCGTCAACCTGATCCGTGACAC
TCGTGTCGACGCCAAGATTGACTACAAGGAGGGCACTGTGATCATGAACC
ACCCCCCGCAGTCGGTGTACCAGCAGGTCATTGAGAAGACCAAAGGTGCT
TTCTTCCGCACGCAAGTTCTGAGATGGCAGCCAACGTTCCTCCTTCCGCT
GAGACCCTTCTCAGCGGTGCTGCCGCCCACCCGCCCAAGACCGCTGAAGA
GATCGCCAACCAGTATGACCTGCTGCCCAAGCTGATCCCCTACCTCGACC
GCCATCTGGTCTTCCCTCTTCTCGAGTTCAGCTCCGGCTCCCAGGAAGAT
GACAAGGAGATGATCCGCGCCAAGTACGAGCTGTTGAAGCACACCAACAT
GACCGACTATGTGGCCAACCTGTGGAAGGAAATTAACGACTCCGACACCA
TCCCCGACGAGTTCGTCAAGAAGAGAGAGGAGGTCCTCGCCAAGTTGCAA
CACTACCAGGAGCAGAGCGCCAAGATCACCGAGCTGCTGCAGGATGAGGA
TGTCGTCGGCAACCTGCGCAGCGACAAGGTCGCCAACTTGAAGTTCCTCG
AGGAGGAGCACGGTGTCACCGCCGATATGGTCAACAGCCTTTTCGACTAT
GGTCGCTTCCAGTACAGCTGCGGTAGTTACGGCAATGCCGCTGAGCTGCT
GTACCAGTTCCGTGTCCTCTCCACCGACAACGACAAGGTTGCTTCCGCCA
CATGGGGTAAGCTCGCCTCGGAGATTCTGACCACCAGCTGGGATGGTGCT
ATGGAGGAAGTCCAGAAGGTCAAGGACTCGATCGAGACCCGTCTCTTCAA
CAACCCTCTGGGTCAGCTCCAGAACCGCTCCTGGTTGATCCACTGGTCTC
TCTTCCCCTTCTTCAACTACGACCCTGCTCGCGATGTCCTGACCGACCTT
TTCTTCTCCCCCGCCTACATCAACACCATCCAGACTAGCTGCCCCTGGAT
CCTGCGCTACCTCGCCGCCGCCGTCATCACCAACCGCAACCGTGCCCACA
AGAACAGCAACGTCTACCAGAAGCAGTTGAAGGACCTGATCCGCGTCGTT
CGCCAGGAGGGCTACGAATACTCCGACCCCATCACCGACTTCGTTAAGGC
GCTGTACGTTGACTTCGACTTTGAGGAGGCCCAGAAGAAGTTGGGTGAGG
CCGAGGATGTGTTGCGGAGCGACTTCTTCCTCGTTTCGGCTGCCGATGCC
TTCGTTGAGGCTGCCCGTCACCTGATCTCCGAGAGCTACTGCAAGATCCA
CCAGCGGATCGACATCAATGCTGCCGTTGCGAAATAAGGACCTGTCTACC
CGTCTGGGTCTGAACCAGGATGAGGGTGAGAAGTGGATCGTCAACCTGAT
CCGTGACACTCGTGTCGACGCCAAGATTGACTACAAGGAGGGCACTGTGA
TCATGAACCACCCCCCGCAGTCGGTGTACCAGCAGGTCATTGAGAAGACC
AAAGGTGCTTTCTTCCGCACGCAAGTTCTGAGATGGCAGCCAACGTTCCT
CCTTCCGCTGAGACCCTTCTCAGCGGTGCTGCCGCCCACCCGCCCAAGAC
CGCTGAAGAGATCGCCAACCAGTATGACCTGCTGCCCAAGCTGATCCCCT
ACCTCGACCGCCATCTGGTCTTCCCTCTTCTCGAGTTCAGCTCCGGCTCC
CAGGAAGATGACAAGGAGATGATCCGCGCCAAGTACGAGCTGTTGAAGCA
CACCAACATGACCGACTATGTGGCCAACCTGTGGAAGGAAATTAACGACT
CCGACACCATCCCCGACGAGTTCGTCAAGAAGAGAGAGGAGGTCCTCGCC
AAGTTGCAACACTACCAGGAGCAGAGCGCCAAGATCACCGAGCTGCTGCA
GGATGAGGATGTCGTCGGCAACCTGCGCAGCGACAAGGTCGCCAACTTGA
AGTTCCTCGAGGAGGAGCACGGTGTCACCGCCGATATGGTCAACAGCCTT
TTCGACTATGGTCGCTTCCAGTACAGCTGCGGTAGTTACGGCAATGCCGC
TGAGCTGCTGTACCAGTTCCGTGTCCTCTCCACCGACAACGACAAGGTTG
CTTCCGCCACATGGGGTAAGCTCGCCTCGGAGATTCTGACCACCAGCTGG
GATGGTGCTATGGAGGAAGTCCAGAAGGTCAAGGACTCGATCGAGACCCG
TCTCTTCAACAACCCTCTGGGTCAGCTCCAGAACCGCTCCTGGTTGATCC
ACTGGTCTCTCTTCCCCTTCTTCAACTACGACCCTGCTCGCGATGTCCTG
ACCGACCTTTTCTTCTCCCCCGCCTACATCAACACCATCCAGACTAGCTG
CCCCTGGATCCTGCGCTACCTCGCCGCCGCCGTCATCACCAACCGCAACC
GTGCCCACAAGAACAGCAACGTCTACCAGAAGCAGTTGAAGGACCTGATC
CGCGTCGTTCGCCAGGAGGGCTACGAATACTCCGACCCCATCACCGACTT
CGTTAAGGCGCTGTACGTTGACTTCGACTTTGAGGAGGCCCAGAAGAAGT
TGGGTGAGGCCGAGGATGTGTTGCGGAGCGACTTCTTCCTCGTTTCGGCT
GCCGATGCCTTCGTTGAGGCTGCCCGTCACCTGATCTCCGAGAGCTACTG
CAAGATCCACCAGCGGATCGACATCAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005852eukaryotic translation initiation factor 3 complex
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
INT6CBS51388_001783Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001783-T1CBS51388_001783-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001783-T1.cdsCBS51388_001783-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001783-T1.exon3CBS51388_001783-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_001783-T1.exon2CBS51388_001783-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001783-T1.exon1CBS51388_001783-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR016650
DBxrefInterPro:IPR000717
DBxrefInterPro:IPR019010
DBxrefPFAM:PF01399
DBxrefPFAM:PF09440
Producteukaryotic translation initiation factor 3 subunit E
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:1702533..1704018 -
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