|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:1817057..1819288+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001822-T1 ID=CBS51388_001822-T1|Name=CBS51388_001822-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2232bp|location=Sequence derived from alignment at An02:1817057..1819288+ (Aspergillus niger CBS 513.88)
ATGTATCGCCTAAGCCGAGCCTTCCATCAAAGAACCCCCCTACCAAATCC
CTTCCAAACGCGGCCTTTTCTCAAGCGACACCGCCCATTCTCCACTCTTC
CCCGGCACTCATCTCCGGGACCATCTGTATCTGAAGCCCCGCTATTCGAC
CACTACTACGAGTGAGTAACCAGCCCGCACACCTCACCCCAGAAGTACAT
TGACTGACAGATTAATTCCATAAAGTGCCATCGTAATAGGAGCCGGCGGC
GCCGGCCTCCGCGCCGCAGTCGGTCTGACCGAGTCAGGGTTCCGCACCGC
ATGCATCACGAAACTGGTAGCATACCCTATACCCATTCCCTTCACATATA
TAACCCCCGAACAATCTCACAAAAGAGAGAAGTGACAATGAAATTAAGTT
TGAACATGATAGTTCCCCACACGCTCCCACACCGTCGCAGCCCAAGGCGG
CATCAACGCCGCGCTAGGTAACATGACGAAAGACGATTACCGTTGGCACA
TGTACGACACAGTCAAGGGCTCAGACTGGCTAGGAGACCAAGATGCAATC
CACTATATGACAAGAGAAGCGCCGAAGGCTATATACGAGCTGGAGAACTA
CGGCATGGCGTTTTCCAGAACAGAAGATGGTCGCATATACCAGCGGGCTC
TTGGGGGACAGAGTCTCGATTATGGGAAAGGAGGGCAGGCGTATCGGACC
GCTTGTGCGGCGGATCGGACGGGCCATGCCATGTTGCATGCTCTGTATGG
GGAGGCGTTGAAGGTATATCAGGCCATCATAATATACTGTAGAAATGATG
AACCTTGGTTCAATATAGTACTCTGGCAGAGACTGACTGACTGACGGATG
TGTTTAAACTCCAGCACGATACCCAATTCTTCGTTGAATTCTTCGCCCTT
GATCTTCTCATGGTCGACGGTGCCTGCGTTGGGGTCATCTGCCTCTCTCT
TGAAGACGGCACGCTGCATCGCTTTTTTGCGCGAAACACTGTCCTCGCGA
CGGGCGGTTACGGCCGGGCTTACTTCTCCTGCACGTCTGCACATACTTCT
ACCGGAGATGGTAATGCCATAGTTGCCCGCGCGGGTCTTCCTAACCAGGA
TATGGAGTTCGTGCAGTTCCACCCTTCTGGGATCCATGGCGCCGGGGTGC
TCATCACGGAAGGTGCTCGCGGGGAGGGCGGATATCTCCTCAATGCGCAC
GGCGAACGCTTCATGGAGCGGTATGCCCCGACAGCTAAAGACCTGGCTAG
TCGGGATGTAGTAGCAAGAGCCATGAATCTTGAGATCCGCGAGGGCCGGG
GCTGTGGCCCGGATAAGGATCATATCCATCTCCAGCTGTCTCATTTACCT
GCCGAGCTCATTCGTTCACGACTCCCTGGGATTCTTGAGACGGCGTCAAT
TTTCGCGGGGATTGACATTACTCGGGATCCTATTCCTGTTGTTCCTACGG
TTCATTACTGCATGGGCGGGATACCGACGAACTATAAAGGCCAGGTGCTT
ACTAGTAGTAGCCACACTTCCTCGGGGACAAACATCCCAGATGCAGAGGT
AGAACCCGTCCCAGGCCTCTACGCAGCCGGCGAATGTGCCAGTGTCAGCG
TGCACGGCGCCAACCGACTCGGCGCAAACTCGCTCCTGGACATAGTTGTC
TTCGGCCGGGCGTGTGCACTCCACATCGCCGAGACCAACGAACCCAACAT
GCCGCTTCACAATATCCCACACGATGATACTCCTCCGTCAAGCCTAGGCC
AAGACTCTCTATCAAGCCTATCCACGACCCTCCACGCAACAGGCGACCTC
CCGTCTTCATCACTACGTCACAACCTCCAACGAGCCATGCAAACGGACCT
CGCTGTGTTCCGCACGCACGAATCCCTTACCACAGGACTAAGTAAAGTGA
TCCAAGTGCAGAATGATTTCTCCACGCGACTCAGAACAAGCGATAGAAGT
CTAATCTGGAATTCAGACCTAGTAGAGACACTGGAGTTGAGGAATCTGCT
GACGTGCGCGGCGCAGACGGCTATGGCGGCGTTGTGTAGGACGGAGAGTC
GGGGGAGTCATGCAAGGGAGGATTTCCCGGAGAGGGACGATGAGGGATGG
TTGAAGCATAGTTGGACGTGGCAGAAAGACGAGAAAGAGGAGGGGGTTCG
GGTGGGGTATCGGGGGGTGATTATGAAGACGTTGGATGAGGGGGATTGTA
AGAGTGTGCCGCCGGTGAAGAGGAGCTACTGA back to topCoding sequence (CDS) from alignment at An02:1817057..1819288+ >CBS51388_001822-T1 ID=CBS51388_001822-T1|Name=CBS51388_001822-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7884bp|location=Sequence derived from alignment at An02:1817057..1819288+ (Aspergillus niger CBS 513.88)
ATGTATCGCCTAAGCCGAGCCTTCCATCAAAGAACCCCCCTACCAAATCC
CTTCCAAACGCGGCCTTTTCTCAAGCGACACCGCCCATTCTCCACTCTTC
CCCGGCACTCATCTCCGGGACCATCTGTATCTGAAGCCCCGCTATTCGAC
CACTACTACGATGCCATCGTAATAGGAGCCGGCGGCGCCGGCCTCCGCGC
CGCAGTCGGTCTGACCGAGTCAGGGTTCCGCACCGCATGCATCACGAAAC
TGTTCCCCACACGCTCCCACACCGTCGCAGCCCAAGGCGGCATCAACGCC
GCGCTAGGTAACATGACGAAAGACGATTACCGTTGGCACATGTACGACAC
AGTCAAGGGCTCAGACTGGCTAGGAGACCAAGATGCAATCCACTATATGA
CAAGAGAAGCGCCGAAGGCTATATACGAGCTGGAGAACTACGGCATGGCG
TTTTCCAGAACAGAAGATGGTCGCATATACCAGCGGGCTCTTGGGGGACA
GAGTCTCGATTATGGGAAAGGAGGGCAGGCGTATCGGACCGCTTGTGCGG
CGGATCGGACGGGCCATGCCATGTTGCATGCTCTGTATGGGGAGGCGTTG
AAGCACGATACCCAATTCTTCGTTGAATTCTTCGCCCTTGATCTTCTCAT
GGTCGACGGTGCCTGCGTTGGGGTCATCTGCCTCTCTCTTGAAGACGGCA
CGCTGCATCGCTTTTTTGCGCGAAACACTGTCCTCGCGACGGGCGGTTAC
GGCCGGGCTTACTTCTCCTGCACGTCTGCACATACTTCTACCGGAGATGG
TAATGCCATAGTTGCCCGCGCGGGTCTTCCTAACCAGGATATGGAGTTCG
TGCAGTTCCACCCTTCTGGGATCCATGGCGCCGGGGTGCTCATCACGGAA
GGTGCTCGCGGGGAGGGCGGATATCTCCTCAATGCGCACGGCGAACGCTT
CATGGAGCGGTATGCCCCGACAGCTAAAGACCTGGCTAGTCGGGATGTAG
TAGCAAGAGCCATGAATCTTGAGATCCGCGAGGGCCGGGGCTGTGGCCCG
GATAAGGATCATATCCATCTCCAGCTGTCTCATTTACCTGCCGAGCTCAT
TCGTTCACGACTCCCTGGGATTCTTGAGACGGCGTCAATTTTCGCGGGGA
TTGACATTACTCGGGATCCTATTCCTGTTGTTCCTACGGTTCATTACTGC
ATGGGCGGGATACCGACGAACTATAAAGGCCAGGTGCTTACTAGTAGTAG
CCACACTTCCTCGGGGACAAACATCCCAGATGCAGAGGTAGAACCCGTCC
CAGGCCTCTACGCAGCCGGCGAATGTGCCAGTGTCAGCGTGCACGGCGCC
AACCGACTCGGCGCAAACTCGCTCCTGGACATAGTTGTCTTCGGCCGGGC
GTGTGCACTCCACATCGCCGAGACCAACGAACCCAACATGCCGCTTCACA
ATATCCCACACGATGATACTCCTCCGTCAAGCCTAGGCCAAGACTCTCTA
TCAAGCCTATCCACGACCCTCCACGCAACAGGCGACCTCCCGTCTTCATC
ACTACGTCACAACCTCCAACGAGCCATGCAAACGGACCTCGCTGTGTTCC
GCACGCACGAATCCCTTACCACAGGACTAAGTAAAGTGATCCAAGTGCAG
AATGATTTCTCCACGCGACTCAGAACAAGCGATAGAAGTCTAATCTGGAA
TTCAGACCTAGTAGAGACACTGGAGTTGAGGAATCTGCTGACGTGCGCGG
CGCAGACGGCTATGGCGGCGTTGTGTAGGACGGAGAGTCGGGGGAGTCAT
GCAAGGGAGGATTTCCCGGAGAGGGACGATGAGGGATGGTTGAAGCATAG
TTGGACGTGGCAGAAAGACGAGAAAGAGGAGGGGGTTCGGGTGGGGTATC
GGGGGGTGATTATGAAGACGTTGGATGAGGGGGATTGTAAGAGTGTGCCG
CCGGTGAAGAGGAGCTACTGAATGTATCGCCTAAGCCGAGCCTTCCATCA
AAGAACCCCCCTACCAAATCCCTTCCAAACGCGGCCTTTTCTCAAGCGAC
ACCGCCCATTCTCCACTCTTCCCCGGCACTCATCTCCGGGACCATCTGTA
TCTGAAGCCCCGCTATTCGACCACTACTACGATGCCATCGTAATAGGAGC
CGGCGGCGCCGGCCTCCGCGCCGCAGTCGGTCTGACCGAGTCAGGGTTCC
GCACCGCATGCATCACGAAACTGTTCCCCACACGCTCCCACACCGTCGCA
GCCCAAGGCGGCATCAACGCCGCGCTAGGTAACATGACGAAAGACGATTA
CCGTTGGCACATGTACGACACAGTCAAGGGCTCAGACTGGCTAGGAGACC
AAGATGCAATCCACTATATGACAAGAGAAGCGCCGAAGGCTATATACGAG
CTGGAGAACTACGGCATGGCGTTTTCCAGAACAGAAGATGGTCGCATATA
CCAGCGGGCTCTTGGGGGACAGAGTCTCGATTATGGGAAAGGAGGGCAGG
CGTATCGGACCGCTTGTGCGGCGGATCGGACGGGCCATGCCATGTTGCAT
GCTCTGTATGGGGAGGCGTTGAAGCACGATACCCAATTCTTCGTTGAATT
CTTCGCCCTTGATCTTCTCATGGTCGACGGTGCCTGCGTTGGGGTCATCT
GCCTCTCTCTTGAAGACGGCACGCTGCATCGCTTTTTTGCGCGAAACACT
GTCCTCGCGACGGGCGGTTACGGCCGGGCTTACTTCTCCTGCACGTCTGC
ACATACTTCTACCGGAGATGGTAATGCCATAGTTGCCCGCGCGGGTCTTC
CTAACCAGGATATGGAGTTCGTGCAGTTCCACCCTTCTGGGATCCATGGC
GCCGGGGTGCTCATCACGGAAGGTGCTCGCGGGGAGGGCGGATATCTCCT
CAATGCGCACGGCGAACGCTTCATGGAGCGGTATGCCCCGACAGCTAAAG
ACCTGGCTAGTCGGGATGTAGTAGCAAGAGCCATGAATCTTGAGATCCGC
GAGGGCCGGGGCTGTGGCCCGGATAAGGATCATATCCATCTCCAGCTGTC
TCATTTACCTGCCGAGCTCATTCGTTCACGACTCCCTGGGATTCTTGAGA
CGGCGTCAATTTTCGCGGGGATTGACATTACTCGGGATCCTATTCCTGTT
GTTCCTACGGTTCATTACTGCATGGGCGGGATACCGACGAACTATAAAGG
CCAGGTGCTTACTAGTAGTAGCCACACTTCCTCGGGGACAAACATCCCAG
ATGCAGAGGTAGAACCCGTCCCAGGCCTCTACGCAGCCGGCGAATGTGCC
AGTGTCAGCGTGCACGGCGCCAACCGACTCGGCGCAAACTCGCTCCTGGA
CATAGTTGTCTTCGGCCGGGCGTGTGCACTCCACATCGCCGAGACCAACG
AACCCAACATGCCGCTTCACAATATCCCACACGATGATACTCCTCCGTCA
AGCCTAGGCCAAGACTCTCTATCAAGCCTATCCACGACCCTCCACGCAAC
AGGCGACCTCCCGTCTTCATCACTACGTCACAACCTCCAACGAGCCATGC
AAACGGACCTCGCTGTGTTCCGCACGCACGAATCCCTTACCACAGGACTA
AGTAAAGTGATCCAAGTGCAGAATGATTTCTCCACGCGACTCAGAACAAG
CGATAGAAGTCTAATCTGGAATTCAGACCTAGTAGAGACACTGGAGTTGA
GGAATCTGCTGACGTGCGCGGCGCAGACGGCTATGGCGGCGTTGTGTAGG
ACGGAGAGTCGGGGGAGTCATGCAAGGGAGGATTTCCCGGAGAGGGACGA
TGAGGGATGGTTGAAGCATAGTTGGACGTGGCAGAAAGACGAGAAAGAGG
AGGGGGTTCGGGTGGGGTATCGGGGGGTGATTATGAAGACGTTGGATGAG
GGGGATTGTAAGAGTGTGCCGCCGGTGAAGAGGAGCTACTGAATGTATCG
CCTAAGCCGAGCCTTCCATCAAAGAACCCCCCTACCAAATCCCTTCCAAA
CGCGGCCTTTTCTCAAGCGACACCGCCCATTCTCCACTCTTCCCCGGCAC
TCATCTCCGGGACCATCTGTATCTGAAGCCCCGCTATTCGACCACTACTA
CGATGCCATCGTAATAGGAGCCGGCGGCGCCGGCCTCCGCGCCGCAGTCG
GTCTGACCGAGTCAGGGTTCCGCACCGCATGCATCACGAAACTGTTCCCC
ACACGCTCCCACACCGTCGCAGCCCAAGGCGGCATCAACGCCGCGCTAGG
TAACATGACGAAAGACGATTACCGTTGGCACATGTACGACACAGTCAAGG
GCTCAGACTGGCTAGGAGACCAAGATGCAATCCACTATATGACAAGAGAA
GCGCCGAAGGCTATATACGAGCTGGAGAACTACGGCATGGCGTTTTCCAG
AACAGAAGATGGTCGCATATACCAGCGGGCTCTTGGGGGACAGAGTCTCG
ATTATGGGAAAGGAGGGCAGGCGTATCGGACCGCTTGTGCGGCGGATCGG
ACGGGCCATGCCATGTTGCATGCTCTGTATGGGGAGGCGTTGAAGCACGA
TACCCAATTCTTCGTTGAATTCTTCGCCCTTGATCTTCTCATGGTCGACG
GTGCCTGCGTTGGGGTCATCTGCCTCTCTCTTGAAGACGGCACGCTGCAT
CGCTTTTTTGCGCGAAACACTGTCCTCGCGACGGGCGGTTACGGCCGGGC
TTACTTCTCCTGCACGTCTGCACATACTTCTACCGGAGATGGTAATGCCA
TAGTTGCCCGCGCGGGTCTTCCTAACCAGGATATGGAGTTCGTGCAGTTC
CACCCTTCTGGGATCCATGGCGCCGGGGTGCTCATCACGGAAGGTGCTCG
CGGGGAGGGCGGATATCTCCTCAATGCGCACGGCGAACGCTTCATGGAGC
GGTATGCCCCGACAGCTAAAGACCTGGCTAGTCGGGATGTAGTAGCAAGA
GCCATGAATCTTGAGATCCGCGAGGGCCGGGGCTGTGGCCCGGATAAGGA
TCATATCCATCTCCAGCTGTCTCATTTACCTGCCGAGCTCATTCGTTCAC
GACTCCCTGGGATTCTTGAGACGGCGTCAATTTTCGCGGGGATTGACATT
ACTCGGGATCCTATTCCTGTTGTTCCTACGGTTCATTACTGCATGGGCGG
GATACCGACGAACTATAAAGGCCAGGTGCTTACTAGTAGTAGCCACACTT
CCTCGGGGACAAACATCCCAGATGCAGAGGTAGAACCCGTCCCAGGCCTC
TACGCAGCCGGCGAATGTGCCAGTGTCAGCGTGCACGGCGCCAACCGACT
CGGCGCAAACTCGCTCCTGGACATAGTTGTCTTCGGCCGGGCGTGTGCAC
TCCACATCGCCGAGACCAACGAACCCAACATGCCGCTTCACAATATCCCA
CACGATGATACTCCTCCGTCAAGCCTAGGCCAAGACTCTCTATCAAGCCT
ATCCACGACCCTCCACGCAACAGGCGACCTCCCGTCTTCATCACTACGTC
ACAACCTCCAACGAGCCATGCAAACGGACCTCGCTGTGTTCCGCACGCAC
GAATCCCTTACCACAGGACTAAGTAAAGTGATCCAAGTGCAGAATGATTT
CTCCACGCGACTCAGAACAAGCGATAGAAGTCTAATCTGGAATTCAGACC
TAGTAGAGACACTGGAGTTGAGGAATCTGCTGACGTGCGCGGCGCAGACG
GCTATGGCGGCGTTGTGTAGGACGGAGAGTCGGGGGAGTCATGCAAGGGA
GGATTTCCCGGAGAGGGACGATGAGGGATGGTTGAAGCATAGTTGGACGT
GGCAGAAAGACGAGAAAGAGGAGGGGGTTCGGGTGGGGTATCGGGGGGTG
ATTATGAAGACGTTGGATGAGGGGGATTGTAAGAGTGTGCCGCCGGTGAA
GAGGAGCTACTGAATGTATCGCCTAAGCCGAGCCTTCCATCAAAGAACCC
CCCTACCAAATCCCTTCCAAACGCGGCCTTTTCTCAAGCGACACCGCCCA
TTCTCCACTCTTCCCCGGCACTCATCTCCGGGACCATCTGTATCTGAAGC
CCCGCTATTCGACCACTACTACGATGCCATCGTAATAGGAGCCGGCGGCG
CCGGCCTCCGCGCCGCAGTCGGTCTGACCGAGTCAGGGTTCCGCACCGCA
TGCATCACGAAACTGTTCCCCACACGCTCCCACACCGTCGCAGCCCAAGG
CGGCATCAACGCCGCGCTAGGTAACATGACGAAAGACGATTACCGTTGGC
ACATGTACGACACAGTCAAGGGCTCAGACTGGCTAGGAGACCAAGATGCA
ATCCACTATATGACAAGAGAAGCGCCGAAGGCTATATACGAGCTGGAGAA
CTACGGCATGGCGTTTTCCAGAACAGAAGATGGTCGCATATACCAGCGGG
CTCTTGGGGGACAGAGTCTCGATTATGGGAAAGGAGGGCAGGCGTATCGG
ACCGCTTGTGCGGCGGATCGGACGGGCCATGCCATGTTGCATGCTCTGTA
TGGGGAGGCGTTGAAGCACGATACCCAATTCTTCGTTGAATTCTTCGCCC
TTGATCTTCTCATGGTCGACGGTGCCTGCGTTGGGGTCATCTGCCTCTCT
CTTGAAGACGGCACGCTGCATCGCTTTTTTGCGCGAAACACTGTCCTCGC
GACGGGCGGTTACGGCCGGGCTTACTTCTCCTGCACGTCTGCACATACTT
CTACCGGAGATGGTAATGCCATAGTTGCCCGCGCGGGTCTTCCTAACCAG
GATATGGAGTTCGTGCAGTTCCACCCTTCTGGGATCCATGGCGCCGGGGT
GCTCATCACGGAAGGTGCTCGCGGGGAGGGCGGATATCTCCTCAATGCGC
ACGGCGAACGCTTCATGGAGCGGTATGCCCCGACAGCTAAAGACCTGGCT
AGTCGGGATGTAGTAGCAAGAGCCATGAATCTTGAGATCCGCGAGGGCCG
GGGCTGTGGCCCGGATAAGGATCATATCCATCTCCAGCTGTCTCATTTAC
CTGCCGAGCTCATTCGTTCACGACTCCCTGGGATTCTTGAGACGGCGTCA
ATTTTCGCGGGGATTGACATTACTCGGGATCCTATTCCTGTTGTTCCTAC
GGTTCATTACTGCATGGGCGGGATACCGACGAACTATAAAGGCCAGGTGC
TTACTAGTAGTAGCCACACTTCCTCGGGGACAAACATCCCAGATGCAGAG
GTAGAACCCGTCCCAGGCCTCTACGCAGCCGGCGAATGTGCCAGTGTCAG
CGTGCACGGCGCCAACCGACTCGGCGCAAACTCGCTCCTGGACATAGTTG
TCTTCGGCCGGGCGTGTGCACTCCACATCGCCGAGACCAACGAACCCAAC
ATGCCGCTTCACAATATCCCACACGATGATACTCCTCCGTCAAGCCTAGG
CCAAGACTCTCTATCAAGCCTATCCACGACCCTCCACGCAACAGGCGACC
TCCCGTCTTCATCACTACGTCACAACCTCCAACGAGCCATGCAAACGGAC
CTCGCTGTGTTCCGCACGCACGAATCCCTTACCACAGGACTAAGTAAAGT
GATCCAAGTGCAGAATGATTTCTCCACGCGACTCAGAACAAGCGATAGAA
GTCTAATCTGGAATTCAGACCTAGTAGAGACACTGGAGTTGAGGAATCTG
CTGACGTGCGCGGCGCAGACGGCTATGGCGGCGTTGTGTAGGACGGAGAG
TCGGGGGAGTCATGCAAGGGAGGATTTCCCGGAGAGGGACGATGAGGGAT
GGTTGAAGCATAGTTGGACGTGGCAGAAAGACGAGAAAGAGGAGGGGGTT
CGGGTGGGGTATCGGGGGGTGATTATGAAGACGTTGGATGAGGGGGATTG
TAAGAGTGTGCCGCCGGTGAAGAGGAGCTACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0022900 | electron transport chain |
| GO:0055114 | oxidation-reduction process |
| GO:0006099 | tricarboxylic acid cycle |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
| GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR037099 |
| DBxref | InterPro:IPR003952 |
| DBxref | InterPro:IPR014006 |
| DBxref | InterPro:IPR027477 |
| DBxref | InterPro:IPR015939 |
| DBxref | InterPro:IPR036188 |
| DBxref | InterPro:IPR011281 |
| DBxref | InterPro:IPR003953 |
| DBxref | PFAM:PF02910 |
| DBxref | PFAM:PF00890 |
| Product | succinate dehydrogenase flavoprotein subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:1817057..1819288 + |
|
