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CBS51388_001827-T1, CBS51388_001827-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001827-T1
Unique NameCBS51388_001827-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:1832041..1832559+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001827-T1 ID=CBS51388_001827-T1|Name=CBS51388_001827-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=519bp|location=Sequence derived from alignment at An02:1832041..1832559+ (Aspergillus niger CBS 513.88)
ATGACCGGCCTTGACGCGGACACCGACCAAATCCTCCAAATCTGTTGCTT
CATCACCGACGCCAATCTCAACCTCCTCGAGCCCCAGGGCTTCGAAACCG
TCATCCACCATCCGACCTCAGTCCTAGACAACATGAACGCATGGTGCATC
GAGACCCACGGTCGCACAGGGCTAACGGCGGCCGTGCAGGCCTCGACCAC
CACCGCGGAGGAGGCTGCGACGGCTCTTTTGGCCTATATCCAGAAATACG
TGCCACAACCCCGGCGAGGGTTGCTGGCAGGGAACAGTGTACACGCCGAC
AAGGCGTTTCTGGCTAAGGGACCATACCAAGCGGTGCTAGACTGGCTACA
CTATCGGATCGTGGACGTGAGCGCACTCAAGGAGATGGTACGACGGTGGG
GCTCAGAAGAGCTACTAGAATCCGTGCCAGGGAAGAAGGAGGTTCATCTT
GCGCGGGACGATATTCTGGAAAGCATCGAAGAGATGCGATTCTACCGGGG
GCGATTGTTCGGATTCTAG
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Coding sequence (CDS) from alignment at An02:1832041..1832559+

>CBS51388_001827-T1 ID=CBS51388_001827-T1|Name=CBS51388_001827-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=519bp|location=Sequence derived from alignment at An02:1832041..1832559+ (Aspergillus niger CBS 513.88)
ATGACCGGCCTTGACGCGGACACCGACCAAATCCTCCAAATCTGTTGCTT
CATCACCGACGCCAATCTCAACCTCCTCGAGCCCCAGGGCTTCGAAACCG
TCATCCACCATCCGACCTCAGTCCTAGACAACATGAACGCATGGTGCATC
GAGACCCACGGTCGCACAGGGCTAACGGCGGCCGTGCAGGCCTCGACCAC
CACCGCGGAGGAGGCTGCGACGGCTCTTTTGGCCTATATCCAGAAATACG
TGCCACAACCCCGGCGAGGGTTGCTGGCAGGGAACAGTGTACACGCCGAC
AAGGCGTTTCTGGCTAAGGGACCATACCAAGCGGTGCTAGACTGGCTACA
CTATCGGATCGTGGACGTGAGCGCACTCAAGGAGATGGTACGACGGTGGG
GCTCAGAAGAGCTACTAGAATCCGTGCCAGGGAAGAAGGAGGTTCATCTT
GCGCGGGACGATATTCTGGAAAGCATCGAAGAGATGCGATTCTACCGGGG
GCGATTGTTCGGATTCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:00001753'-5'-exoribonuclease activity
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_001827CBS51388_001827Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001827-T1.exon1CBS51388_001827-T1.exon1Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001827-T1.cdsCBS51388_001827-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001827-T1CBS51388_001827-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264V2U
DBxrefInterPro:IPR012337
DBxrefInterPro:IPR022894
DBxrefInterPro:IPR036397
DBxrefInterPro:IPR013520
DBxrefPFAM:PF00929
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:1832041..1832559 +
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