CBS51388_001851-T1, CBS51388_001851-T1 (mRNA) Aspergillus niger CBS 513.88

Overview


Name	CBS51388_001851-T1
Unique Name	CBS51388_001851-T1
Type	mRNA
Organism	Aspergillus niger CBS 513.88

Sequences

The following sequences are available for this feature:

mRNA from alignment at An02:1894109..1895890+
coding sequence from alignment at An02:1894109..1895890+

mRNA from alignment at An02:1894109..1895890+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>CBS51388_001851-T1 ID=CBS51388_001851-T1|Name=CBS51388_001851-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1782bp|location=Sequence derived from alignment at An02:1894109..1895890+ (Aspergillus niger CBS 513.88)
ATGGGTGGAATTCTTCACCTCGTTGAGGATCGTCCGACTCCCAAAAATGT
CTACAATTGGCGAGTCTATGTGCTCGCCCTCATTGCCTCATGTGGTTCCA
ACATGATTGGGTATACCAGTGGGTTCATCGGGACGACAATCACTCTGCCT
TCCTTCGAACGCGAGTTTGGGTTGGATAAGATGACCAGTTCTCACGTGGA
TCTGATTAGTGAAAATATTGTCTCTTTGTTCATTGCTGGTGCCTTCTTTG
GAGCTCTGCTCACTTATGGAATTTCTCACGTTTTTGGACGTAAATGGAGT
TTGACTATCTCCTCGGCTGTCTTCATTCTCGGTGCCGGGTTGCAGATGGG
AGCCAACGGCTCTCGTGGGCTCGGCATCTTGTACGCTGGCCGTGTCCTTT
CCGGTCTCGGCACGGGTGTGGCTTCCAACGTCGTCCCGATTTACCTGTCC
GAACTGGCTCCTCCGGCCATCAGAGGCCGACTGGTCGGTTTCTATGAACT
TGGCTGGCAGGTTGGTGGTATGGTTGGTTTTTGGATTAACGTAAGTGGCT
TTCCTTTTATTTCTTGCTAAATTTCTCAAATCCCTTCATTTCATCCCAAT
GTTGCCATTTTTCGTCACGTGCATTGCTGATAACCTTCTCTATAGTATGG
TGTCGAACAAACTATGCCATCGGACCACCAGCAATGGGTTATCCCCTTTG
CTGTTCAATTGATCCCATCGGGCATGCTCTTCCTCGGCTCCCTGTGGATG
AGAGAATCCCCTCGTTGGCTATTCCTCAAGGGTCGTCGCGAGCAAGCCAT
GAAGAACCTCTGCTGGATTCGTCAACTCGATGAAACTGATATTTACATCA
CCGAGGAGGTGGCTACTGTTGACCAAGCCATCGAGGAGCAGGTTGCTACT
GTTGGTCTGGGCTTCTGGAAGCCCTTCAAGGCTGTCTTCCAGGCGCCTAG
CTTGCAGTACCGCCTCTTCCTGGGTTGCATGCTGTTCTTCTGGCAGAACG
CGTCCGGTATCAACGCCATCAACTACTACAGCCCGACTATCTTCGCCAGT
CTTGGTGTTACTGGCAACACTAAGGGTATTCTCAATGGTATCTTTGGTGT
CGTCAAGGCTGTCTTCACCGTTATCTGGCTGCTCTTTTTGGTTGATCAAT
TCGGACGTCGTAAGCTCCTCCTCTGTGGTGCCGTCTGCGGATCCGCCTGC
ATGTATGCTATTGGTGCCTACATCTACATTGTCCGTCCGACAGAACACCC
CCAGGACCACTTGAATGGTGGAGGTATTGCTGCCATCTTCTTCTTCTACC
TGTGGACTGCTGTCTATACCCCCACTTGGAACGGTACCCCGTGGGTCATC
AACTCGGTAAGTTCCCCTTTGCTCCAACGAAGCAGGCCTCCTATGAAAAT
CTTGCTAACTGTTTGTGAATAGGAGTTCTTCGATCCCAACATCCGTCCGC
TGTCCCAGGCCTGCACCACGGCCAGCAACTGGCTCTTCAACTTCCTTGTC
TCTCGTTTCACCGAGCAGATGTTCGCCGCGATGAGCTACGGCGTGTACTT
CTTCTTCGCGTCGTTGTCCTTCTTCGCCTGGTTCTTCGCCTTCTTCCTCA
TCCCCGAGACCAGTGGTATCCCATTAGAGGCGGTCGACCAGCTCTTCAGA
ATCAAGCCGATCTGGAGGGCGAACGAGAAACTCAAGGAGCAGCTGAGAGA
AGAAGAGGAACGTTTCCGTCACGAAATGAAGGATGGGGCGTTCGAGAAGA
ACGACCCTCAGGAGCATGTCGAGAGCGCTTAA

Coding sequence (CDS) from alignment at An02:1894109..1895890+

>CBS51388_001851-T1 ID=CBS51388_001851-T1|Name=CBS51388_001851-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4833bp|location=Sequence derived from alignment at An02:1894109..1895890+ (Aspergillus niger CBS 513.88)
ATGGGTGGAATTCTTCACCTCGTTGAGGATCGTCCGACTCCCAAAAATGT
CTACAATTGGCGAGTCTATGTGCTCGCCCTCATTGCCTCATGTGGTTCCA
ACATGATTGGGTATACCAGTGGGTTCATCGGGACGACAATCACTCTGCCT
TCCTTCGAACGCGAGTTTGGGTTGGATAAGATGACCAGTTCTCACGTGGA
TCTGATTAGTGAAAATATTGTCTCTTTGTTCATTGCTGGTGCCTTCTTTG
GAGCTCTGCTCACTTATGGAATTTCTCACGTTTTTGGACGTAAATGGAGT
TTGACTATCTCCTCGGCTGTCTTCATTCTCGGTGCCGGGTTGCAGATGGG
AGCCAACGGCTCTCGTGGGCTCGGCATCTTGTACGCTGGCCGTGTCCTTT
CCGGTCTCGGCACGGGTGTGGCTTCCAACGTCGTCCCGATTTACCTGTCC
GAACTGGCTCCTCCGGCCATCAGAGGCCGACTGGTCGGTTTCTATGAACT
TGGCTGGCAGGTTGGTGGTATGGTTGGTTTTTGGATTAACTATGGTGTCG
AACAAACTATGCCATCGGACCACCAGCAATGGGTTATCCCCTTTGCTGTT
CAATTGATCCCATCGGGCATGCTCTTCCTCGGCTCCCTGTGGATGAGAGA
ATCCCCTCGTTGGCTATTCCTCAAGGGTCGTCGCGAGCAAGCCATGAAGA
ACCTCTGCTGGATTCGTCAACTCGATGAAACTGATATTTACATCACCGAG
GAGGTGGCTACTGTTGACCAAGCCATCGAGGAGCAGGTTGCTACTGTTGG
TCTGGGCTTCTGGAAGCCCTTCAAGGCTGTCTTCCAGGCGCCTAGCTTGC
AGTACCGCCTCTTCCTGGGTTGCATGCTGTTCTTCTGGCAGAACGCGTCC
GGTATCAACGCCATCAACTACTACAGCCCGACTATCTTCGCCAGTCTTGG
TGTTACTGGCAACACTAAGGGTATTCTCAATGGTATCTTTGGTGTCGTCA
AGGCTGTCTTCACCGTTATCTGGCTGCTCTTTTTGGTTGATCAATTCGGA
CGTCGTAAGCTCCTCCTCTGTGGTGCCGTCTGCGGATCCGCCTGCATGTA
TGCTATTGGTGCCTACATCTACATTGTCCGTCCGACAGAACACCCCCAGG
ACCACTTGAATGGTGGAGGTATTGCTGCCATCTTCTTCTTCTACCTGTGG
ACTGCTGTCTATACCCCCACTTGGAACGGTACCCCGTGGGTCATCAACTC
GGAGTTCTTCGATCCCAACATCCGTCCGCTGTCCCAGGCCTGCACCACGG
CCAGCAACTGGCTCTTCAACTTCCTTGTCTCTCGTTTCACCGAGCAGATG
TTCGCCGCGATGAGCTACGGCGTGTACTTCTTCTTCGCGTCGTTGTCCTT
CTTCGCCTGGTTCTTCGCCTTCTTCCTCATCCCCGAGACCAGTGGTATCC
CATTAGAGGCGGTCGACCAGCTCTTCAGAATCAAGCCGATCTGGAGGGCG
AACGAGAAACTCAAGGAGCAGCTGAGAGAAGAAGAGGAACGTTTCCGTCA
CGAAATGAAGGATGGGGCGTTCGAGAAGAACGACCCTCAGGAGCATGTCG
AGAGCGCTTAAATGGGTGGAATTCTTCACCTCGTTGAGGATCGTCCGACT
CCCAAAAATGTCTACAATTGGCGAGTCTATGTGCTCGCCCTCATTGCCTC
ATGTGGTTCCAACATGATTGGGTATACCAGTGGGTTCATCGGGACGACAA
TCACTCTGCCTTCCTTCGAACGCGAGTTTGGGTTGGATAAGATGACCAGT
TCTCACGTGGATCTGATTAGTGAAAATATTGTCTCTTTGTTCATTGCTGG
TGCCTTCTTTGGAGCTCTGCTCACTTATGGAATTTCTCACGTTTTTGGAC
GTAAATGGAGTTTGACTATCTCCTCGGCTGTCTTCATTCTCGGTGCCGGG
TTGCAGATGGGAGCCAACGGCTCTCGTGGGCTCGGCATCTTGTACGCTGG
CCGTGTCCTTTCCGGTCTCGGCACGGGTGTGGCTTCCAACGTCGTCCCGA
TTTACCTGTCCGAACTGGCTCCTCCGGCCATCAGAGGCCGACTGGTCGGT
TTCTATGAACTTGGCTGGCAGGTTGGTGGTATGGTTGGTTTTTGGATTAA
CTATGGTGTCGAACAAACTATGCCATCGGACCACCAGCAATGGGTTATCC
CCTTTGCTGTTCAATTGATCCCATCGGGCATGCTCTTCCTCGGCTCCCTG
TGGATGAGAGAATCCCCTCGTTGGCTATTCCTCAAGGGTCGTCGCGAGCA
AGCCATGAAGAACCTCTGCTGGATTCGTCAACTCGATGAAACTGATATTT
ACATCACCGAGGAGGTGGCTACTGTTGACCAAGCCATCGAGGAGCAGGTT
GCTACTGTTGGTCTGGGCTTCTGGAAGCCCTTCAAGGCTGTCTTCCAGGC
GCCTAGCTTGCAGTACCGCCTCTTCCTGGGTTGCATGCTGTTCTTCTGGC
AGAACGCGTCCGGTATCAACGCCATCAACTACTACAGCCCGACTATCTTC
GCCAGTCTTGGTGTTACTGGCAACACTAAGGGTATTCTCAATGGTATCTT
TGGTGTCGTCAAGGCTGTCTTCACCGTTATCTGGCTGCTCTTTTTGGTTG
ATCAATTCGGACGTCGTAAGCTCCTCCTCTGTGGTGCCGTCTGCGGATCC
GCCTGCATGTATGCTATTGGTGCCTACATCTACATTGTCCGTCCGACAGA
ACACCCCCAGGACCACTTGAATGGTGGAGGTATTGCTGCCATCTTCTTCT
TCTACCTGTGGACTGCTGTCTATACCCCCACTTGGAACGGTACCCCGTGG
GTCATCAACTCGGAGTTCTTCGATCCCAACATCCGTCCGCTGTCCCAGGC
CTGCACCACGGCCAGCAACTGGCTCTTCAACTTCCTTGTCTCTCGTTTCA
CCGAGCAGATGTTCGCCGCGATGAGCTACGGCGTGTACTTCTTCTTCGCG
TCGTTGTCCTTCTTCGCCTGGTTCTTCGCCTTCTTCCTCATCCCCGAGAC
CAGTGGTATCCCATTAGAGGCGGTCGACCAGCTCTTCAGAATCAAGCCGA
TCTGGAGGGCGAACGAGAAACTCAAGGAGCAGCTGAGAGAAGAAGAGGAA
CGTTTCCGTCACGAAATGAAGGATGGGGCGTTCGAGAAGAACGACCCTCA
GGAGCATGTCGAGAGCGCTTAAATGGGTGGAATTCTTCACCTCGTTGAGG
ATCGTCCGACTCCCAAAAATGTCTACAATTGGCGAGTCTATGTGCTCGCC
CTCATTGCCTCATGTGGTTCCAACATGATTGGGTATACCAGTGGGTTCAT
CGGGACGACAATCACTCTGCCTTCCTTCGAACGCGAGTTTGGGTTGGATA
AGATGACCAGTTCTCACGTGGATCTGATTAGTGAAAATATTGTCTCTTTG
TTCATTGCTGGTGCCTTCTTTGGAGCTCTGCTCACTTATGGAATTTCTCA
CGTTTTTGGACGTAAATGGAGTTTGACTATCTCCTCGGCTGTCTTCATTC
TCGGTGCCGGGTTGCAGATGGGAGCCAACGGCTCTCGTGGGCTCGGCATC
TTGTACGCTGGCCGTGTCCTTTCCGGTCTCGGCACGGGTGTGGCTTCCAA
CGTCGTCCCGATTTACCTGTCCGAACTGGCTCCTCCGGCCATCAGAGGCC
GACTGGTCGGTTTCTATGAACTTGGCTGGCAGGTTGGTGGTATGGTTGGT
TTTTGGATTAACTATGGTGTCGAACAAACTATGCCATCGGACCACCAGCA
ATGGGTTATCCCCTTTGCTGTTCAATTGATCCCATCGGGCATGCTCTTCC
TCGGCTCCCTGTGGATGAGAGAATCCCCTCGTTGGCTATTCCTCAAGGGT
CGTCGCGAGCAAGCCATGAAGAACCTCTGCTGGATTCGTCAACTCGATGA
AACTGATATTTACATCACCGAGGAGGTGGCTACTGTTGACCAAGCCATCG
AGGAGCAGGTTGCTACTGTTGGTCTGGGCTTCTGGAAGCCCTTCAAGGCT
GTCTTCCAGGCGCCTAGCTTGCAGTACCGCCTCTTCCTGGGTTGCATGCT
GTTCTTCTGGCAGAACGCGTCCGGTATCAACGCCATCAACTACTACAGCC
CGACTATCTTCGCCAGTCTTGGTGTTACTGGCAACACTAAGGGTATTCTC
AATGGTATCTTTGGTGTCGTCAAGGCTGTCTTCACCGTTATCTGGCTGCT
CTTTTTGGTTGATCAATTCGGACGTCGTAAGCTCCTCCTCTGTGGTGCCG
TCTGCGGATCCGCCTGCATGTATGCTATTGGTGCCTACATCTACATTGTC
CGTCCGACAGAACACCCCCAGGACCACTTGAATGGTGGAGGTATTGCTGC
CATCTTCTTCTTCTACCTGTGGACTGCTGTCTATACCCCCACTTGGAACG
GTACCCCGTGGGTCATCAACTCGGAGTTCTTCGATCCCAACATCCGTCCG
CTGTCCCAGGCCTGCACCACGGCCAGCAACTGGCTCTTCAACTTCCTTGT
CTCTCGTTTCACCGAGCAGATGTTCGCCGCGATGAGCTACGGCGTGTACT
TCTTCTTCGCGTCGTTGTCCTTCTTCGCCTGGTTCTTCGCCTTCTTCCTC
ATCCCCGAGACCAGTGGTATCCCATTAGAGGCGGTCGACCAGCTCTTCAG
AATCAAGCCGATCTGGAGGGCGAACGAGAAACTCAAGGAGCAGCTGAGAG
AAGAAGAGGAACGTTTCCGTCACGAAATGAAGGATGGGGCGTTCGAGAAG
AACGACCCTCAGGAGCATGTCGAGAGCGCTTAA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0022857	transmembrane transporter activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
CBS51388_001851	CBS51388_001851	Aspergillus niger CBS 513.88	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_001851-T1.exon1	CBS51388_001851-T1.exon1	Aspergillus niger CBS 513.88	exon
CBS51388_001851-T1.exon2	CBS51388_001851-T1.exon2	Aspergillus niger CBS 513.88	exon
CBS51388_001851-T1.exon3	CBS51388_001851-T1.exon3	Aspergillus niger CBS 513.88	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_001851-T1.cds	CBS51388_001851-T1.cds	Aspergillus niger CBS 513.88	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_001851-T1	CBS51388_001851-T1-protein	Aspergillus niger CBS 513.88	polypeptide

Properties


Property Name	Value
DBxref	InterPro:IPR036259
DBxref	InterPro:IPR020846
DBxref	InterPro:IPR005829
DBxref	InterPro:IPR005828
DBxref	InterPro:IPR003663
DBxref	PFAM:PF00083
DBxref	PFAM:PF07690
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger CBS 513.88 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
An02	supercontig	An02:1894109..1895890 +

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CBS51388_001851-T1, CBS51388_001851-T1 (mRNA) Aspergillus niger CBS 513.88