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CBS51388_001865-T1, CBS51388_001865-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001865-T1
Unique NameCBS51388_001865-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:1948353..1948754+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001865-T1 ID=CBS51388_001865-T1|Name=CBS51388_001865-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=402bp|location=Sequence derived from alignment at An02:1948353..1948754+ (Aspergillus niger CBS 513.88)
ATGCCTTTCACTGCCTCGTAAGTCTTGCAACCCCTCGCGACGTCATCTTT
TGGCGATTTCCTATCCAGTCGCGCGCATACCTGGACCTTGACGAGCTGGA
GCTGTCTTGGGATAGCTTGCGATCCCAATAATCTGAATGACGAGAGCATA
GTGTCGTGGGTATGCTAACGCCGTTGGGACCATAGGGATATCTGCAAGAT
CATCTTTGCGATCATCTTGCCGCCACTGGGTGTTTTCCTGGAGCGAGGAT
GCGGTGCTGATTTCCTGATCAACATCTGTTTGACAATCCTGGGTTGGCTC
CCTGGTGTCATTCATGCCTTGTACGTGGCCCGCCAAGTGATGGATTTCCG
GAGATTCCGAGGCTAACTCGTTTCGTTCAGCTATATCATATTCAAATACT
AG
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Coding sequence (CDS) from alignment at An02:1948353..1948754+

>CBS51388_001865-T1 ID=CBS51388_001865-T1|Name=CBS51388_001865-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=522bp|location=Sequence derived from alignment at An02:1948353..1948754+ (Aspergillus niger CBS 513.88)
ATGCCTTTCACTGCCTCGGATATCTGCAAGATCATCTTTGCGATCATCTT
GCCGCCACTGGGTGTTTTCCTGGAGCGAGGATGCGGTGCTGATTTCCTGA
TCAACATCTGTTTGACAATCCTGGGTTGGCTCCCTGGTGTCATTCATGCC
TTCTATATCATATTCAAATACTAGATGCCTTTCACTGCCTCGGATATCTG
CAAGATCATCTTTGCGATCATCTTGCCGCCACTGGGTGTTTTCCTGGAGC
GAGGATGCGGTGCTGATTTCCTGATCAACATCTGTTTGACAATCCTGGGT
TGGCTCCCTGGTGTCATTCATGCCTTCTATATCATATTCAAATACTAGAT
GCCTTTCACTGCCTCGGATATCTGCAAGATCATCTTTGCGATCATCTTGC
CGCCACTGGGTGTTTTCCTGGAGCGAGGATGCGGTGCTGATTTCCTGATC
AACATCTGTTTGACAATCCTGGGTTGGCTCCCTGGTGTCATTCATGCCTT
CTATATCATATTCAAATACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PMP3CBS51388_001865Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001865-T1.exon1CBS51388_001865-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_001865-T1.exon2CBS51388_001865-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001865-T1.exon3CBS51388_001865-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001865-T1.cdsCBS51388_001865-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001865-T1CBS51388_001865-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR000612
DBxrefPFAM:PF01679
Productplasma membrane proteolipid Pmp3
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:1948353..1948754 +
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