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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:1961128..1961802- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001870-T1 ID=CBS51388_001870-T1|Name=CBS51388_001870-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=675bp|location=Sequence derived from alignment at An02:1961128..1961802- (Aspergillus niger CBS 513.88)
ATGGCCCCCGTTGCTGTACGTTTCCTTCCTTGAGACTGCTTTGCTGTTCT
CCCCGAATGGGTCCATGTCCATGAAGATGTTTTCTCTGCGTTGAAAAATG
AGAGAATACACTTTTCATGGGAAGAAACCCCGGGGTTCCGACATTATGGA
ACAGTAGGCTAATCATTTATTTTCGGACTATAGACTCGTGGTCGCAAGGC
CCAGAAGGTCACCAAGAAGGTATGTGCTTATCGCAATCGCAATCGCAGGC
GCAAGTAAAATTCGTGGGTACTAATTGTTTATCTTATAGTTCGTCATCAA
CGCTTCTCAGCCCGTGAGCGACAAGATCTTCGACCTCTCTGCTTTCGAGA
AGTTCCTCCACGACCGCATCAAGGTCGAGGGCCGTGTCGGCAACCTCGGT
GACAAGGTCGTCATCTCCCAGGCTGGTGACGGCAAGGTCGAGGTTGTTGC
TCACATCCCCTTCTCTGGCCGCTACCTCAAGTACCTGTATGTTCCTCCTT
CCATTGATTTAATACAAGTTGGCAAGATGCTAATTGTTCCTCCAATAGCA
CCAAGAAGTACCTCAAGAAGCAGCAGCTCCGTGACTGGCTCCGTGTCGTC
TCCACCTCCAAGGGTGTCTACGAGCTCCGCTTCTACAACGTCGTCAACGA
CGAGGGCGAGGAGGATGAGGAGTAA back to topCoding sequence (CDS) from alignment at An02:1961128..1961802- >CBS51388_001870-T1 ID=CBS51388_001870-T1|Name=CBS51388_001870-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1500bp|location=Sequence derived from alignment at An02:1961128..1961802- (Aspergillus niger CBS 513.88)
CACCAAGAAGTACCTCAAGAAGCAGCAGCTCCGTGACTGGCTCCGTGTCG
TCTCCACCTCCAAGGGTGTCTACGAGCTCCGCTTCTACAACGTCGTCAAC
GACGAGGGCGAGGAGGATGAGGAGTAATTCGTCATCAACGCTTCTCAGCC
CGTGAGCGACAAGATCTTCGACCTCTCTGCTTTCGAGAAGTTCCTCCACG
ACCGCATCAAGGTCGAGGGCCGTGTCGGCAACCTCGGTGACAAGGTCGTC
ATCTCCCAGGCTGGTGACGGCAAGGTCGAGGTTGTTGCTCACATCCCCTT
CTCTGGCCGCTACCTCAAGTACCTACTCGTGGTCGCAAGGCCCAGAAGGT
CACCAAGAAGATGGCCCCCGTTGCTCACCAAGAAGTACCTCAAGAAGCAG
CAGCTCCGTGACTGGCTCCGTGTCGTCTCCACCTCCAAGGGTGTCTACGA
GCTCCGCTTCTACAACGTCGTCAACGACGAGGGCGAGGAGGATGAGGAGT
AATTCGTCATCAACGCTTCTCAGCCCGTGAGCGACAAGATCTTCGACCTC
TCTGCTTTCGAGAAGTTCCTCCACGACCGCATCAAGGTCGAGGGCCGTGT
CGGCAACCTCGGTGACAAGGTCGTCATCTCCCAGGCTGGTGACGGCAAGG
TCGAGGTTGTTGCTCACATCCCCTTCTCTGGCCGCTACCTCAAGTACCTA
CTCGTGGTCGCAAGGCCCAGAAGGTCACCAAGAAGATGGCCCCCGTTGCT
CACCAAGAAGTACCTCAAGAAGCAGCAGCTCCGTGACTGGCTCCGTGTCG
TCTCCACCTCCAAGGGTGTCTACGAGCTCCGCTTCTACAACGTCGTCAAC
GACGAGGGCGAGGAGGATGAGGAGTAATTCGTCATCAACGCTTCTCAGCC
CGTGAGCGACAAGATCTTCGACCTCTCTGCTTTCGAGAAGTTCCTCCACG
ACCGCATCAAGGTCGAGGGCCGTGTCGGCAACCTCGGTGACAAGGTCGTC
ATCTCCCAGGCTGGTGACGGCAAGGTCGAGGTTGTTGCTCACATCCCCTT
CTCTGGCCGCTACCTCAAGTACCTACTCGTGGTCGCAAGGCCCAGAAGGT
CACCAAGAAGATGGCCCCCGTTGCTCACCAAGAAGTACCTCAAGAAGCAG
CAGCTCCGTGACTGGCTCCGTGTCGTCTCCACCTCCAAGGGTGTCTACGA
GCTCCGCTTCTACAACGTCGTCAACGACGAGGGCGAGGAGGATGAGGAGT
AATTCGTCATCAACGCTTCTCAGCCCGTGAGCGACAAGATCTTCGACCTC
TCTGCTTTCGAGAAGTTCCTCCACGACCGCATCAAGGTCGAGGGCCGTGT
CGGCAACCTCGGTGACAAGGTCGTCATCTCCCAGGCTGGTGACGGCAAGG
TCGAGGTTGTTGCTCACATCCCCTTCTCTGGCCGCTACCTCAAGTACCTA
CTCGTGGTCGCAAGGCCCAGAAGGTCACCAAGAAGATGGCCCCCGTTGCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002671 |
| DBxref | InterPro:IPR038526 |
| DBxref | PFAM:PF01776 |
| Product | 60S ribosomal protein L22 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:1961128..1961802 - |
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