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CBS51388_001872-T1, CBS51388_001872-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001872-T1
Unique NameCBS51388_001872-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:1963875..1965080+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001872-T1 ID=CBS51388_001872-T1|Name=CBS51388_001872-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1206bp|location=Sequence derived from alignment at An02:1963875..1965080+ (Aspergillus niger CBS 513.88)
ATGATCGATCACAACATCTTCGAAGACCTGCAGGCCAAGATTGACGAGGA
GGCCGCGGTCCGCGATGTAAGTTGACCCGTGCCCGCGCCAAGCGCAGAGA
CAAAACCGAAAGCAAAGCGCCGTTGTGTTAACAAGATGTACAGGAGCTTC
ACGATATTGTGCAGACGCTTGCTAGAAAGGGTACTTACCTACTTACCTAT
CCCTATATGAATTCTCAGAATTGGGATTATCTCGATTTGAGATTCGTCGA
CTGACTATTAGGATCGGATTATAGGAAGATCTACCCAGGCTATTCTTTCG
CGAGCTCATTCTACTCCCACTGATCAGTGTATGATTGACTCCTCTCTTCA
TATCCTGATGACTGCTTAGGCGAAACAGCTAATATGGACAGTGAAACCCG
TTCTCGATGACGCAACCAAGGAGATCATCGCCCAGAGGGATGAAGTATCT
CGGTTGAAGACTGTGGCGGACAAGCACCCGTTTTACAAGTACAATGGGGT
GTGGACGCGCGAGTTGCAGAACCTTGTGCGTGCCCCTTCTGTTACTGGGG
TTTGTTTATTGCAGACGAGAGCTAATCAGCCAATCAACAGGTCTCGTCGA
TCGAGCTCTGCGCTTGGCTAGGCGGACTGGAAGAGTACAAGACGAACAGC
TCCTCTTCGTTTCTGACGATAGAAGAGGTTGGAAATTTCCTGGGTGGTAG
GTTCTCACTTCCTTGTATTCATTAACAGTTTCGAATTGTGTAGTGGATTC
GATTCTAATGATGATGATATCTAGTCCCCGTGAATCTCAAAGAACAGGAT
GCCTTCCATCTCACTATTGAGGAGTATTTGCTTGCGCTGATTTCCATGGT
CGAGGAGCTGGTCAGTTTCTCCGTGCCCCATATTGATTTGTTATTGGACT
ACTATTTGCTGATAGAAGATGTGGCAGGCCCGTCTGGCTGTCAACTCGGT
CACTCTGGGTGACTATACCCGGCCGGTGCAAATTGGCAACTTCATCAAGG
ATTTGTTTGCGGGCTTCCAGTTGCTGAACCTGAAGAATGATATTTTGCGG
AAGAGGAGTGATGGAATTAAATACAGTGTAAGTTTCTATCTGTGAGGTTG
TAGATTATGGGATGCTAATGCGCTGGTACAGGTTAAGAAGGTGGAGGATG
TCGTTTACGATCTCTCTTTGCGCAATTTGATTCCCAAGGGTAGCGCTGCG
GCGTAA
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Coding sequence (CDS) from alignment at An02:1963875..1965080+

>CBS51388_001872-T1 ID=CBS51388_001872-T1|Name=CBS51388_001872-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4788bp|location=Sequence derived from alignment at An02:1963875..1965080+ (Aspergillus niger CBS 513.88)
ATGATCGATCACAACATCTTCGAAGACCTGCAGGCCAAGATTGACGAGGA
GGCCGCGGTCCGCGATGAAGATCTACCCAGGCTATTCTTTCGCGAGCTCA
TTCTACTCCCACTGATCAGTCTAATATGGACAGTGAAACCCGTTCTCGAT
GACGCAACCAAGGAGATCATCGCCCAGAGGGATGAAGTATCTCGGTTGAA
GACTGTGGCGGACAAGCACCCGTTTTACAAGTACAATGGGGTGTGGACGC
GCGAGTTGCAGAACCTTGTCTCGTCGATCGAGCTCTGCGCTTGGCTAGGC
GGACTGGAAGAGTACAAGACGAACAGCTCCTCTTCGTTTCTGACGATAGA
AGAGGTTGGAAATTTCCTGGGTGTCCCCGTGAATCTCAAAGAACAGGATG
CCTTCCATCTCACTATTGAGGAGTATTTGCTTGCGCTGATTTCCATGGTC
GAGGAGCTGGCCCGTCTGGCTGTCAACTCGGTCACTCTGGGTGACTATAC
CCGGCCGGTGCAAATTGGCAACTTCATCAAGGATTTGTTTGCGGGCTTCC
AGTTGCTGAACCTGAAGAATGATATTTTGCGGAAGAGGAGTGATGGAATT
AAATACAGTGTTAAGAAGGTGGAGGATGTCGTTTACGATCTCTCTTTGCG
CAATTTGATTCCCAAGGGTAGCGCTGCGGCGTAAATGATCGATCACAACA
TCTTCGAAGACCTGCAGGCCAAGATTGACGAGGAGGCCGCGGTCCGCGAT
GAAGATCTACCCAGGCTATTCTTTCGCGAGCTCATTCTACTCCCACTGAT
CAGTCTAATATGGACAGTGAAACCCGTTCTCGATGACGCAACCAAGGAGA
TCATCGCCCAGAGGGATGAAGTATCTCGGTTGAAGACTGTGGCGGACAAG
CACCCGTTTTACAAGTACAATGGGGTGTGGACGCGCGAGTTGCAGAACCT
TGTCTCGTCGATCGAGCTCTGCGCTTGGCTAGGCGGACTGGAAGAGTACA
AGACGAACAGCTCCTCTTCGTTTCTGACGATAGAAGAGGTTGGAAATTTC
CTGGGTGTCCCCGTGAATCTCAAAGAACAGGATGCCTTCCATCTCACTAT
TGAGGAGTATTTGCTTGCGCTGATTTCCATGGTCGAGGAGCTGGCCCGTC
TGGCTGTCAACTCGGTCACTCTGGGTGACTATACCCGGCCGGTGCAAATT
GGCAACTTCATCAAGGATTTGTTTGCGGGCTTCCAGTTGCTGAACCTGAA
GAATGATATTTTGCGGAAGAGGAGTGATGGAATTAAATACAGTGTTAAGA
AGGTGGAGGATGTCGTTTACGATCTCTCTTTGCGCAATTTGATTCCCAAG
GGTAGCGCTGCGGCGTAAATGATCGATCACAACATCTTCGAAGACCTGCA
GGCCAAGATTGACGAGGAGGCCGCGGTCCGCGATGAAGATCTACCCAGGC
TATTCTTTCGCGAGCTCATTCTACTCCCACTGATCAGTCTAATATGGACA
GTGAAACCCGTTCTCGATGACGCAACCAAGGAGATCATCGCCCAGAGGGA
TGAAGTATCTCGGTTGAAGACTGTGGCGGACAAGCACCCGTTTTACAAGT
ACAATGGGGTGTGGACGCGCGAGTTGCAGAACCTTGTCTCGTCGATCGAG
CTCTGCGCTTGGCTAGGCGGACTGGAAGAGTACAAGACGAACAGCTCCTC
TTCGTTTCTGACGATAGAAGAGGTTGGAAATTTCCTGGGTGTCCCCGTGA
ATCTCAAAGAACAGGATGCCTTCCATCTCACTATTGAGGAGTATTTGCTT
GCGCTGATTTCCATGGTCGAGGAGCTGGCCCGTCTGGCTGTCAACTCGGT
CACTCTGGGTGACTATACCCGGCCGGTGCAAATTGGCAACTTCATCAAGG
ATTTGTTTGCGGGCTTCCAGTTGCTGAACCTGAAGAATGATATTTTGCGG
AAGAGGAGTGATGGAATTAAATACAGTGTTAAGAAGGTGGAGGATGTCGT
TTACGATCTCTCTTTGCGCAATTTGATTCCCAAGGGTAGCGCTGCGGCGT
AAATGATCGATCACAACATCTTCGAAGACCTGCAGGCCAAGATTGACGAG
GAGGCCGCGGTCCGCGATGAAGATCTACCCAGGCTATTCTTTCGCGAGCT
CATTCTACTCCCACTGATCAGTCTAATATGGACAGTGAAACCCGTTCTCG
ATGACGCAACCAAGGAGATCATCGCCCAGAGGGATGAAGTATCTCGGTTG
AAGACTGTGGCGGACAAGCACCCGTTTTACAAGTACAATGGGGTGTGGAC
GCGCGAGTTGCAGAACCTTGTCTCGTCGATCGAGCTCTGCGCTTGGCTAG
GCGGACTGGAAGAGTACAAGACGAACAGCTCCTCTTCGTTTCTGACGATA
GAAGAGGTTGGAAATTTCCTGGGTGTCCCCGTGAATCTCAAAGAACAGGA
TGCCTTCCATCTCACTATTGAGGAGTATTTGCTTGCGCTGATTTCCATGG
TCGAGGAGCTGGCCCGTCTGGCTGTCAACTCGGTCACTCTGGGTGACTAT
ACCCGGCCGGTGCAAATTGGCAACTTCATCAAGGATTTGTTTGCGGGCTT
CCAGTTGCTGAACCTGAAGAATGATATTTTGCGGAAGAGGAGTGATGGAA
TTAAATACAGTGTTAAGAAGGTGGAGGATGTCGTTTACGATCTCTCTTTG
CGCAATTTGATTCCCAAGGGTAGCGCTGCGGCGTAAATGATCGATCACAA
CATCTTCGAAGACCTGCAGGCCAAGATTGACGAGGAGGCCGCGGTCCGCG
ATGAAGATCTACCCAGGCTATTCTTTCGCGAGCTCATTCTACTCCCACTG
ATCAGTCTAATATGGACAGTGAAACCCGTTCTCGATGACGCAACCAAGGA
GATCATCGCCCAGAGGGATGAAGTATCTCGGTTGAAGACTGTGGCGGACA
AGCACCCGTTTTACAAGTACAATGGGGTGTGGACGCGCGAGTTGCAGAAC
CTTGTCTCGTCGATCGAGCTCTGCGCTTGGCTAGGCGGACTGGAAGAGTA
CAAGACGAACAGCTCCTCTTCGTTTCTGACGATAGAAGAGGTTGGAAATT
TCCTGGGTGTCCCCGTGAATCTCAAAGAACAGGATGCCTTCCATCTCACT
ATTGAGGAGTATTTGCTTGCGCTGATTTCCATGGTCGAGGAGCTGGCCCG
TCTGGCTGTCAACTCGGTCACTCTGGGTGACTATACCCGGCCGGTGCAAA
TTGGCAACTTCATCAAGGATTTGTTTGCGGGCTTCCAGTTGCTGAACCTG
AAGAATGATATTTTGCGGAAGAGGAGTGATGGAATTAAATACAGTGTTAA
GAAGGTGGAGGATGTCGTTTACGATCTCTCTTTGCGCAATTTGATTCCCA
AGGGTAGCGCTGCGGCGTAAATGATCGATCACAACATCTTCGAAGACCTG
CAGGCCAAGATTGACGAGGAGGCCGCGGTCCGCGATGAAGATCTACCCAG
GCTATTCTTTCGCGAGCTCATTCTACTCCCACTGATCAGTCTAATATGGA
CAGTGAAACCCGTTCTCGATGACGCAACCAAGGAGATCATCGCCCAGAGG
GATGAAGTATCTCGGTTGAAGACTGTGGCGGACAAGCACCCGTTTTACAA
GTACAATGGGGTGTGGACGCGCGAGTTGCAGAACCTTGTCTCGTCGATCG
AGCTCTGCGCTTGGCTAGGCGGACTGGAAGAGTACAAGACGAACAGCTCC
TCTTCGTTTCTGACGATAGAAGAGGTTGGAAATTTCCTGGGTGTCCCCGT
GAATCTCAAAGAACAGGATGCCTTCCATCTCACTATTGAGGAGTATTTGC
TTGCGCTGATTTCCATGGTCGAGGAGCTGGCCCGTCTGGCTGTCAACTCG
GTCACTCTGGGTGACTATACCCGGCCGGTGCAAATTGGCAACTTCATCAA
GGATTTGTTTGCGGGCTTCCAGTTGCTGAACCTGAAGAATGATATTTTGC
GGAAGAGGAGTGATGGAATTAAATACAGTGTTAAGAAGGTGGAGGATGTC
GTTTACGATCTCTCTTTGCGCAATTTGATTCCCAAGGGTAGCGCTGCGGC
GTAAATGATCGATCACAACATCTTCGAAGACCTGCAGGCCAAGATTGACG
AGGAGGCCGCGGTCCGCGATGAAGATCTACCCAGGCTATTCTTTCGCGAG
CTCATTCTACTCCCACTGATCAGTCTAATATGGACAGTGAAACCCGTTCT
CGATGACGCAACCAAGGAGATCATCGCCCAGAGGGATGAAGTATCTCGGT
TGAAGACTGTGGCGGACAAGCACCCGTTTTACAAGTACAATGGGGTGTGG
ACGCGCGAGTTGCAGAACCTTGTCTCGTCGATCGAGCTCTGCGCTTGGCT
AGGCGGACTGGAAGAGTACAAGACGAACAGCTCCTCTTCGTTTCTGACGA
TAGAAGAGGTTGGAAATTTCCTGGGTGTCCCCGTGAATCTCAAAGAACAG
GATGCCTTCCATCTCACTATTGAGGAGTATTTGCTTGCGCTGATTTCCAT
GGTCGAGGAGCTGGCCCGTCTGGCTGTCAACTCGGTCACTCTGGGTGACT
ATACCCGGCCGGTGCAAATTGGCAACTTCATCAAGGATTTGTTTGCGGGC
TTCCAGTTGCTGAACCTGAAGAATGATATTTTGCGGAAGAGGAGTGATGG
AATTAAATACAGTGTTAAGAAGGTGGAGGATGTCGTTTACGATCTCTCTT
TGCGCAATTTGATTCCCAAGGGTAGCGCTGCGGCGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016070RNA metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003697single-stranded DNA binding
GO:0003723RNA binding
GO:0043565sequence-specific DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_001872CBS51388_001872Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001872-T1CBS51388_001872-T1-proteinAspergillus niger CBS 513.88polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001872-T1.exon1CBS51388_001872-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_001872-T1.exon2CBS51388_001872-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001872-T1.exon3CBS51388_001872-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_001872-T1.exon4CBS51388_001872-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_001872-T1.exon5CBS51388_001872-T1.exon5Aspergillus niger CBS 513.88exon
CBS51388_001872-T1.exon6CBS51388_001872-T1.exon6Aspergillus niger CBS 513.88exon
CBS51388_001872-T1.exon7CBS51388_001872-T1.exon7Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001872-T1.cdsCBS51388_001872-T1.cdsAspergillus niger CBS 513.88CDS


Properties
Property NameValue
DBxrefInterPro:IPR036081
DBxrefInterPro:IPR033956
DBxrefInterPro:IPR002848
DBxrefInterPro:IPR016068
DBxrefInterPro:IPR016069
DBxrefPFAM:PF01997
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:1963875..1965080 +
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