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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:1978379..1980281+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001880-T1 ID=CBS51388_001880-T1|Name=CBS51388_001880-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1903bp|location=Sequence derived from alignment at An02:1978379..1980281+ (Aspergillus niger CBS 513.88)
ATGGCTGTATCGACCAATTGCTCCGCGACCGAACAGGTTGAAATCACCAC
GAAGTATAGCCATCAGGTAGAAATAACAAAGCAAGATGACACCGAAGCTA
TCGAAGACGGTGAGTCGGTGGCCTCGTCGGGCGTTTTGAACGTTGTCGTC
TCGGGACTGGGGCTGTTCAGTGATGGCTATAATGCTCAGATCAGTGAGTG
CACCTTTGGGCGAAACTTGTTATTCTCAGCCTGCCTAAGAAGTATCACTA
ATCTCAGTATCCGTGATGAAGTTGGCTACATGGAGCCCCTATTTTCTGTC
TTGTTCGTCCTCACCAAAAACCCATGGTTTCGGACTCTCTAATAACGACA
TTATTGCACATTCAGGTACAAGAATACCATGTCCTCAAGCATCAAAACCA
GATTATCAAACTCCTTTCTCATCGGTGAGATTTTTGGCATGCTGTTCTTC
GGTGCTCTGATCGATCGAGTCGGAAGAAGAACAGGAGTGGTGGCTACTAC
ATCGTTCTTGGTGCTTGGTATCATATTGTCTGCTGCAGCACATGGCACTT
CAGAGTTGGGGTGAGGCTCGCTTCCACCGAATGAGTTATATCCTGGGAAT
ACTGACTCGATGTTTAGGATGTTTTGGATGATGATTGTAGCTCGCGGCAT
CGCTGGCTTCGGCGCTGGCGGCGAATATCCCGTCTGCGCAACCGGTGCAA
CTGAAGCGGCTGATGAAACCGCCAATCTCCGAAAGAAGAGAGGATTTCTG
GTCGCGTCAACCACGGATTTTGCGGTGGACATGGTACGTGTCCGGATACT
ATTAGGACTGAGCTCCACCTCACTAAACTGACCCATGCCTAGGGCTTTGT
GGCTGCCGGTATCGTGGCCCTCATTGTTCTTGCTTGTTTCCACCAGGACA
TCAAGAGTGGTGTTTGGAGAGTTTGCTTTGGACTTGGCTTTGTGGTATGC
TCTAAGACCCCTCAACACGAAGCGGTGTACTAAAATCGTGACAGATTCCG
GTTTTCATGTGTTTCTTTCGGATACGTATGATCAACTCGAAGCAATATCG
TAAGTACGCCATCAAGTCGCGATATCCATACTGGCTTGTCCTTTGTAGAT
ATTGGAAACCGATCCTGGGAACCTGTAAGTGGTAGACCTGAGTATATTCT
CTTTCCAGCAGAAGCCCTGATATCCCAGCTCTCGCTTGGTTCTGCTACGA
CTTTGTCACGTATCCGTTCGGACTCTTCACTTCGACCATCATCGCCCAAC
TAAGCCCGAACAATACGACAGTGGAGAATATTGGTTACGGTGTACGTGAA
ATAAGCAGCCGAATGTCATGATGTGGAGATGCTGATATGGTCCACCAGAC
TGTCATAAACTGCTTCTATCTTCCTGGCTGCCTGCTGGGAGGGCTCCTGA
TGGATAAGATTGGAAGAAAGCAGAACATGACCCTCGGCTTTGTGCTCTGG
GGTGTATGGGGCTTCATCCTGGGCGGTGCTCTTCGTCCGATACAGTCGGT
ATTCCCGTTGTTCGTCGTCATGTACGGCATTTTCAACGCCCTGGGAGAGA
TGGGCCCCGGAGTGTCGACCTTCCTGTGTGCTGCAGAGTCATTTCCCACC
CCTCTTCGTGGCCACTTTCTCGGTCTGGCCGCCGCAGTTGGAAAGGCGGG
TGCATCAATCGGGACCGAGGTATTTACGCCCATCCAGAATTCGTTCTCGT
CTACCGAAAAAGGTCAACAAGCTGTCTTTCTGATCGGGTCGGCTTTCTGT
ATGGTTGGTGCGTTGATAGCGTGGTTCTTGATTCCGGATATGTCGCGGGA
GTTGGAAACAGAGGACGCCAGATTCAAGGCATATTTGGAAGAAATTGGGT
ACGATATCAGTTCATATGGGGAAGCACTTTGTGTCGAGCGGAAGGATAGC
TAG back to topCoding sequence (CDS) from alignment at An02:1978379..1980281+ >CBS51388_001880-T1 ID=CBS51388_001880-T1|Name=CBS51388_001880-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7416bp|location=Sequence derived from alignment at An02:1978379..1980281+ (Aspergillus niger CBS 513.88)
ATGGCTGTATCGACCAATTGCTCCGCGACCGAACAGGTTGAAATCACCAC
GAAGTATAGCCATCAGGTAGAAATAACAAAGCAAGATGACACCGAAGCTA
TCGAAGACGGTGAGTCGGTGGCCTCGTCGGGCGTTTTGAACGTTGTCGTC
TCGGGACTGGGGCTGTTCAGTGATGGCTATAATGCTCAGATCACTCGCGG
CATCGCTGGCTTCGGCGCTGGCGGCGAATATCCCGTCTGCGCAACCGGTG
CAACTGAAGCGGCTGATGAAACCGCCAATCTCCGAAAGAAGAGAGGATTT
CTGGTCGCGTCAACCACGGATTTTGCGGTGGACATGGGCTTTGTGGCTGC
CGGTATCGTGGCCCTCATTGTTCTTGCTTGTTTCCACCAGGACATCAAGA
GTGGTGTTTGGAGAGTTTGCTTTGGACTTGGCTTTGTGATTCCGGTTTTC
ATGTGTTTCTTTCGGATACGTATGATCAACTCGAAGCAATATCGTAAGTA
CGCCATCAAGTCGCGATATCCATACTGGCTTGTCCTTTGTAGATATTGGA
AACCGATCCTGGGAACCTCTCTCGCTTGGTTCTGCTACGACTTTGTCACG
TATCCGTTCGGACTCTTCACTTCGACCATCATCGCCCAACTAAGCCCGAA
CAATACGACAGTGGAGAATATTGGTTACGGTACTGTCATAAACTGCTTCT
ATCTTCCTGGCTGCCTGCTGGGAGGGCTCCTGATGGATAAGATTGGAAGA
AAGCAGAACATGACCCTCGGCTTTGTGCTCTGGGGTGTATGGGGCTTCAT
CCTGGGCGGTGCTCTTCGTCCGATACAGTCGGTATTCCCGTTGTTCGTCG
TCATGTACGGCATTTTCAACGCCCTGGGAGAGATGGGCCCCGGAGTGTCG
ACCTTCCTGTGTGCTGCAGAGTCATTTCCCACCCCTCTTCGTGGCCACTT
TCTCGGTCTGGCCGCCGCAGTTGGAAAGGCGGGTGCATCAATCGGGACCG
AGGTATTTACGCCCATCCAGAATTCGTTCTCGTCTACCGAAAAAGGTCAA
CAAGCTGTCTTTCTGATCGGGTCGGCTTTCTGTATGGTTGGTGCGTTGAT
AGCGTGGTTCTTGATTCCGGATATGTCGCGGGAGTTGGAAACAGAGGACG
CCAGATTCAAGGCATATTTGGAAGAAATTGGGTACGATATCAGTTCATAT
GGGGAAGCACTTTGTGTCGAGCGGAAGGATAGCTAGATGGCTGTATCGAC
CAATTGCTCCGCGACCGAACAGGTTGAAATCACCACGAAGTATAGCCATC
AGGTAGAAATAACAAAGCAAGATGACACCGAAGCTATCGAAGACGGTGAG
TCGGTGGCCTCGTCGGGCGTTTTGAACGTTGTCGTCTCGGGACTGGGGCT
GTTCAGTGATGGCTATAATGCTCAGATCACTCGCGGCATCGCTGGCTTCG
GCGCTGGCGGCGAATATCCCGTCTGCGCAACCGGTGCAACTGAAGCGGCT
GATGAAACCGCCAATCTCCGAAAGAAGAGAGGATTTCTGGTCGCGTCAAC
CACGGATTTTGCGGTGGACATGGGCTTTGTGGCTGCCGGTATCGTGGCCC
TCATTGTTCTTGCTTGTTTCCACCAGGACATCAAGAGTGGTGTTTGGAGA
GTTTGCTTTGGACTTGGCTTTGTGATTCCGGTTTTCATGTGTTTCTTTCG
GATACGTATGATCAACTCGAAGCAATATCGTAAGTACGCCATCAAGTCGC
GATATCCATACTGGCTTGTCCTTTGTAGATATTGGAAACCGATCCTGGGA
ACCTCTCTCGCTTGGTTCTGCTACGACTTTGTCACGTATCCGTTCGGACT
CTTCACTTCGACCATCATCGCCCAACTAAGCCCGAACAATACGACAGTGG
AGAATATTGGTTACGGTACTGTCATAAACTGCTTCTATCTTCCTGGCTGC
CTGCTGGGAGGGCTCCTGATGGATAAGATTGGAAGAAAGCAGAACATGAC
CCTCGGCTTTGTGCTCTGGGGTGTATGGGGCTTCATCCTGGGCGGTGCTC
TTCGTCCGATACAGTCGGTATTCCCGTTGTTCGTCGTCATGTACGGCATT
TTCAACGCCCTGGGAGAGATGGGCCCCGGAGTGTCGACCTTCCTGTGTGC
TGCAGAGTCATTTCCCACCCCTCTTCGTGGCCACTTTCTCGGTCTGGCCG
CCGCAGTTGGAAAGGCGGGTGCATCAATCGGGACCGAGGTATTTACGCCC
ATCCAGAATTCGTTCTCGTCTACCGAAAAAGGTCAACAAGCTGTCTTTCT
GATCGGGTCGGCTTTCTGTATGGTTGGTGCGTTGATAGCGTGGTTCTTGA
TTCCGGATATGTCGCGGGAGTTGGAAACAGAGGACGCCAGATTCAAGGCA
TATTTGGAAGAAATTGGGTACGATATCAGTTCATATGGGGAAGCACTTTG
TGTCGAGCGGAAGGATAGCTAGATGGCTGTATCGACCAATTGCTCCGCGA
CCGAACAGGTTGAAATCACCACGAAGTATAGCCATCAGGTAGAAATAACA
AAGCAAGATGACACCGAAGCTATCGAAGACGGTGAGTCGGTGGCCTCGTC
GGGCGTTTTGAACGTTGTCGTCTCGGGACTGGGGCTGTTCAGTGATGGCT
ATAATGCTCAGATCACTCGCGGCATCGCTGGCTTCGGCGCTGGCGGCGAA
TATCCCGTCTGCGCAACCGGTGCAACTGAAGCGGCTGATGAAACCGCCAA
TCTCCGAAAGAAGAGAGGATTTCTGGTCGCGTCAACCACGGATTTTGCGG
TGGACATGGGCTTTGTGGCTGCCGGTATCGTGGCCCTCATTGTTCTTGCT
TGTTTCCACCAGGACATCAAGAGTGGTGTTTGGAGAGTTTGCTTTGGACT
TGGCTTTGTGATTCCGGTTTTCATGTGTTTCTTTCGGATACGTATGATCA
ACTCGAAGCAATATCGTAAGTACGCCATCAAGTCGCGATATCCATACTGG
CTTGTCCTTTGTAGATATTGGAAACCGATCCTGGGAACCTCTCTCGCTTG
GTTCTGCTACGACTTTGTCACGTATCCGTTCGGACTCTTCACTTCGACCA
TCATCGCCCAACTAAGCCCGAACAATACGACAGTGGAGAATATTGGTTAC
GGTACTGTCATAAACTGCTTCTATCTTCCTGGCTGCCTGCTGGGAGGGCT
CCTGATGGATAAGATTGGAAGAAAGCAGAACATGACCCTCGGCTTTGTGC
TCTGGGGTGTATGGGGCTTCATCCTGGGCGGTGCTCTTCGTCCGATACAG
TCGGTATTCCCGTTGTTCGTCGTCATGTACGGCATTTTCAACGCCCTGGG
AGAGATGGGCCCCGGAGTGTCGACCTTCCTGTGTGCTGCAGAGTCATTTC
CCACCCCTCTTCGTGGCCACTTTCTCGGTCTGGCCGCCGCAGTTGGAAAG
GCGGGTGCATCAATCGGGACCGAGGTATTTACGCCCATCCAGAATTCGTT
CTCGTCTACCGAAAAAGGTCAACAAGCTGTCTTTCTGATCGGGTCGGCTT
TCTGTATGGTTGGTGCGTTGATAGCGTGGTTCTTGATTCCGGATATGTCG
CGGGAGTTGGAAACAGAGGACGCCAGATTCAAGGCATATTTGGAAGAAAT
TGGGTACGATATCAGTTCATATGGGGAAGCACTTTGTGTCGAGCGGAAGG
ATAGCTAGATGGCTGTATCGACCAATTGCTCCGCGACCGAACAGGTTGAA
ATCACCACGAAGTATAGCCATCAGGTAGAAATAACAAAGCAAGATGACAC
CGAAGCTATCGAAGACGGTGAGTCGGTGGCCTCGTCGGGCGTTTTGAACG
TTGTCGTCTCGGGACTGGGGCTGTTCAGTGATGGCTATAATGCTCAGATC
ACTCGCGGCATCGCTGGCTTCGGCGCTGGCGGCGAATATCCCGTCTGCGC
AACCGGTGCAACTGAAGCGGCTGATGAAACCGCCAATCTCCGAAAGAAGA
GAGGATTTCTGGTCGCGTCAACCACGGATTTTGCGGTGGACATGGGCTTT
GTGGCTGCCGGTATCGTGGCCCTCATTGTTCTTGCTTGTTTCCACCAGGA
CATCAAGAGTGGTGTTTGGAGAGTTTGCTTTGGACTTGGCTTTGTGATTC
CGGTTTTCATGTGTTTCTTTCGGATACGTATGATCAACTCGAAGCAATAT
CGTAAGTACGCCATCAAGTCGCGATATCCATACTGGCTTGTCCTTTGTAG
ATATTGGAAACCGATCCTGGGAACCTCTCTCGCTTGGTTCTGCTACGACT
TTGTCACGTATCCGTTCGGACTCTTCACTTCGACCATCATCGCCCAACTA
AGCCCGAACAATACGACAGTGGAGAATATTGGTTACGGTACTGTCATAAA
CTGCTTCTATCTTCCTGGCTGCCTGCTGGGAGGGCTCCTGATGGATAAGA
TTGGAAGAAAGCAGAACATGACCCTCGGCTTTGTGCTCTGGGGTGTATGG
GGCTTCATCCTGGGCGGTGCTCTTCGTCCGATACAGTCGGTATTCCCGTT
GTTCGTCGTCATGTACGGCATTTTCAACGCCCTGGGAGAGATGGGCCCCG
GAGTGTCGACCTTCCTGTGTGCTGCAGAGTCATTTCCCACCCCTCTTCGT
GGCCACTTTCTCGGTCTGGCCGCCGCAGTTGGAAAGGCGGGTGCATCAAT
CGGGACCGAGGTATTTACGCCCATCCAGAATTCGTTCTCGTCTACCGAAA
AAGGTCAACAAGCTGTCTTTCTGATCGGGTCGGCTTTCTGTATGGTTGGT
GCGTTGATAGCGTGGTTCTTGATTCCGGATATGTCGCGGGAGTTGGAAAC
AGAGGACGCCAGATTCAAGGCATATTTGGAAGAAATTGGGTACGATATCA
GTTCATATGGGGAAGCACTTTGTGTCGAGCGGAAGGATAGCTAGATGGCT
GTATCGACCAATTGCTCCGCGACCGAACAGGTTGAAATCACCACGAAGTA
TAGCCATCAGGTAGAAATAACAAAGCAAGATGACACCGAAGCTATCGAAG
ACGGTGAGTCGGTGGCCTCGTCGGGCGTTTTGAACGTTGTCGTCTCGGGA
CTGGGGCTGTTCAGTGATGGCTATAATGCTCAGATCACTCGCGGCATCGC
TGGCTTCGGCGCTGGCGGCGAATATCCCGTCTGCGCAACCGGTGCAACTG
AAGCGGCTGATGAAACCGCCAATCTCCGAAAGAAGAGAGGATTTCTGGTC
GCGTCAACCACGGATTTTGCGGTGGACATGGGCTTTGTGGCTGCCGGTAT
CGTGGCCCTCATTGTTCTTGCTTGTTTCCACCAGGACATCAAGAGTGGTG
TTTGGAGAGTTTGCTTTGGACTTGGCTTTGTGATTCCGGTTTTCATGTGT
TTCTTTCGGATACGTATGATCAACTCGAAGCAATATCGTAAGTACGCCAT
CAAGTCGCGATATCCATACTGGCTTGTCCTTTGTAGATATTGGAAACCGA
TCCTGGGAACCTCTCTCGCTTGGTTCTGCTACGACTTTGTCACGTATCCG
TTCGGACTCTTCACTTCGACCATCATCGCCCAACTAAGCCCGAACAATAC
GACAGTGGAGAATATTGGTTACGGTACTGTCATAAACTGCTTCTATCTTC
CTGGCTGCCTGCTGGGAGGGCTCCTGATGGATAAGATTGGAAGAAAGCAG
AACATGACCCTCGGCTTTGTGCTCTGGGGTGTATGGGGCTTCATCCTGGG
CGGTGCTCTTCGTCCGATACAGTCGGTATTCCCGTTGTTCGTCGTCATGT
ACGGCATTTTCAACGCCCTGGGAGAGATGGGCCCCGGAGTGTCGACCTTC
CTGTGTGCTGCAGAGTCATTTCCCACCCCTCTTCGTGGCCACTTTCTCGG
TCTGGCCGCCGCAGTTGGAAAGGCGGGTGCATCAATCGGGACCGAGGTAT
TTACGCCCATCCAGAATTCGTTCTCGTCTACCGAAAAAGGTCAACAAGCT
GTCTTTCTGATCGGGTCGGCTTTCTGTATGGTTGGTGCGTTGATAGCGTG
GTTCTTGATTCCGGATATGTCGCGGGAGTTGGAAACAGAGGACGCCAGAT
TCAAGGCATATTTGGAAGAAATTGGGTACGATATCAGTTCATATGGGGAA
GCACTTTGTGTCGAGCGGAAGGATAGCTAGATGGCTGTATCGACCAATTG
CTCCGCGACCGAACAGGTTGAAATCACCACGAAGTATAGCCATCAGGTAG
AAATAACAAAGCAAGATGACACCGAAGCTATCGAAGACGGTGAGTCGGTG
GCCTCGTCGGGCGTTTTGAACGTTGTCGTCTCGGGACTGGGGCTGTTCAG
TGATGGCTATAATGCTCAGATCACTCGCGGCATCGCTGGCTTCGGCGCTG
GCGGCGAATATCCCGTCTGCGCAACCGGTGCAACTGAAGCGGCTGATGAA
ACCGCCAATCTCCGAAAGAAGAGAGGATTTCTGGTCGCGTCAACCACGGA
TTTTGCGGTGGACATGGGCTTTGTGGCTGCCGGTATCGTGGCCCTCATTG
TTCTTGCTTGTTTCCACCAGGACATCAAGAGTGGTGTTTGGAGAGTTTGC
TTTGGACTTGGCTTTGTGATTCCGGTTTTCATGTGTTTCTTTCGGATACG
TATGATCAACTCGAAGCAATATCGTAAGTACGCCATCAAGTCGCGATATC
CATACTGGCTTGTCCTTTGTAGATATTGGAAACCGATCCTGGGAACCTCT
CTCGCTTGGTTCTGCTACGACTTTGTCACGTATCCGTTCGGACTCTTCAC
TTCGACCATCATCGCCCAACTAAGCCCGAACAATACGACAGTGGAGAATA
TTGGTTACGGTACTGTCATAAACTGCTTCTATCTTCCTGGCTGCCTGCTG
GGAGGGCTCCTGATGGATAAGATTGGAAGAAAGCAGAACATGACCCTCGG
CTTTGTGCTCTGGGGTGTATGGGGCTTCATCCTGGGCGGTGCTCTTCGTC
CGATACAGTCGGTATTCCCGTTGTTCGTCGTCATGTACGGCATTTTCAAC
GCCCTGGGAGAGATGGGCCCCGGAGTGTCGACCTTCCTGTGTGCTGCAGA
GTCATTTCCCACCCCTCTTCGTGGCCACTTTCTCGGTCTGGCCGCCGCAG
TTGGAAAGGCGGGTGCATCAATCGGGACCGAGGTATTTACGCCCATCCAG
AATTCGTTCTCGTCTACCGAAAAAGGTCAACAAGCTGTCTTTCTGATCGG
GTCGGCTTTCTGTATGGTTGGTGCGTTGATAGCGTGGTTCTTGATTCCGG
ATATGTCGCGGGAGTTGGAAACAGAGGACGCCAGATTCAAGGCATATTTG
GAAGAAATTGGGTACGATATCAGTTCATATGGGGAAGCACTTTGTGTCGA
GCGGAAGGATAGCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005829 |
| DBxref | InterPro:IPR005828 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:1978379..1980281 + |
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