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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:1994635..1996378+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001886-T1 ID=CBS51388_001886-T1|Name=CBS51388_001886-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1744bp|location=Sequence derived from alignment at An02:1994635..1996378+ (Aspergillus niger CBS 513.88)
ATGTCCTCGACACCTCGGTCTAGTACTGTGCCACCAATGCTTACCTCTTC
GCCGCGATCGGATTCATTCATCCGGGCGAGACAACCAAGTCTTGACTTAG
AACACGATCTTCTCTCCACCCGTGGCCAACGCCTCGGGGGACTAATACGA
CGGCGCTCTCTCAGCGTCCAAAGCGCCGATAATCCTTATGACAGTGAAAG
GCTTGAAGATTCCATTCAAGATCGCGGGGATAGGCCTGTTGCTTTTGAGC
GCGCTAGGCGACTCATCGGCGAGAGCAGGCCTATTTATCGTTGGTATGCC
ATTTCCCCTCGTTTCACAGCTTAGTTAATATGTACTAAAGGGGAAATGCA
GGCAACATTTCTATCAGGACCCTACTACGCTGAAGAAAATGCCAAAGGCC
ATGTACGTCCCCGTCTATGGCTCCAACGCTGTGCGATCTGACACGGCAAC
AGGCGCGAGTATTACGAGCGCAACAACGATCTGATATCGCAATATGTCTT
TATTGACAGATTGCTGGACTCCTCTCTCCCCCATCGTCTGATTGTGGACT
ATCACAGCAACCAGCCAGGAGAGCCCCCAGTCTCAACCAACGGCCGGGCA
TATGACGCAACCTCCTACGGCACAGGAGATACCAAAGCATCCGGTAAAAT
CAAGAGAACTCCCCGAAATCTCTATCGCATTCCCAGCGAGAACGAGACAT
CTCCACTCCTGCCCCCGATGATCGAAGAACGAGTAGCATCACCCCCAGAC
ATCATCCCCACAAACGATGAGTTCGTCGACAGCAGCGACCGTATAGTCAC
TGTAGCAATATACGTCAACTTCATCGCCAACGTCCTCCTCCTAGTCGCAA
AGATTATTGCTATGACCATGACAAACTCTCTATCCGTCCTGGCCAGCTTA
GTCGACGGGGCACTGGACTTCCTCAGCACAGCCATAGTCTGGATCACAAC
CACCTTGATCCGTCGACAAGACCGCTCCCGATACCCGATCAGCCGTCGCC
GACTCGAACCACTCAGCGTATTAGTCTTCGCCGTCGTAATGGTGACATCT
TTCGTCCAAGTCGCACTCACATCCTTCACACGCCTCATTTCTTCCGACCG
CTCCGTCGTCGATCTATCCCTCCCTTCCATCGCTGTCATGGCCAGCACAG
TTATCGTCAAGCTCATCTGCTGGTTCTGGTGTCGACTGATTAAGAACTCG
AGCGTCCAAGCACTAGCACAAGACGCCATGACGGACGTAATCTTCAACTT
GTTCAGTATTCTCTTCCCTCTCAGTAAGTTCTTCCTGCCCTCACCCTAAC
TTCTCTCAACCCAAACCACACCACTAACCAATACAACAAAAAGTCGGCTC
CCTGACCACAACCTGGTACATCGACCCGTTAGGCGGTCTTCTCCTGTCCC
TGTACATAATCTACAACTGGAGCGCCACAGCCAGCGAACACATCGGCCAT
CTAACAGGCGCCGCAGCATCACCCAAAGACCACAGTATTCTGCTGTACAT
GACGATGCGGTTCTCGAAAGCAATTCTCAAGATCCAAGATCTAAAGGCCT
ATTACGCAGGAGATCGGCTCAACGTCGAGGTGGATATTGTCCTGGACCCG
AAGACCAGACTCCAAGATAGTCATGATGTTGGGGAGAGTCTGCAGTATAT
GGTGGAGAGTGTGCCTACGGTGGATAGGGCATTCGTGCATATTGATTACG
ATCCGTGGAATATTCCGAGTCATATGAACCAGATTGAGGGGTGA back to topCoding sequence (CDS) from alignment at An02:1994635..1996378+ >CBS51388_001886-T1 ID=CBS51388_001886-T1|Name=CBS51388_001886-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6264bp|location=Sequence derived from alignment at An02:1994635..1996378+ (Aspergillus niger CBS 513.88)
ATGTCCTCGACACCTCGGTCTAGTACTGTGCCACCAATGCTTACCTCTTC
GCCGCGATCGGATTCATTCATCCGGGCGAGACAACCAAGTCTTGACTTAG
AACACGATCTTCTCTCCACCCGTGGCCAACGCCTCGGGGGACTAATACGA
CGGCGCTCTCTCAGCGTCCAAAGCGCCGATAATCCTTATGACAGTGAAAG
GCTTGAAGATTCCATTCAAGATCGCGGGGATAGGCCTGTTGCTTTTGAGC
GCGCTAGGCGACTCATCGGCGAGAGCAGGCCTATTTATCGTTGGCAACAT
TTCTATCAGGACCCTACTACGCTGAAGAAAATGCCAAAGGCCATGCGCGA
GTATTACGAGCGCAACAACGATCTGATATCGCAATATGTCTTTATTGACA
GATTGCTGGACTCCTCTCTCCCCCATCGTCTGATTGTGGACTATCACAGC
AACCAGCCAGGAGAGCCCCCAGTCTCAACCAACGGCCGGGCATATGACGC
AACCTCCTACGGCACAGGAGATACCAAAGCATCCGGTAAAATCAAGAGAA
CTCCCCGAAATCTCTATCGCATTCCCAGCGAGAACGAGACATCTCCACTC
CTGCCCCCGATGATCGAAGAACGAGTAGCATCACCCCCAGACATCATCCC
CACAAACGATGAGTTCGTCGACAGCAGCGACCGTATAGTCACTGTAGCAA
TATACGTCAACTTCATCGCCAACGTCCTCCTCCTAGTCGCAAAGATTATT
GCTATGACCATGACAAACTCTCTATCCGTCCTGGCCAGCTTAGTCGACGG
GGCACTGGACTTCCTCAGCACAGCCATAGTCTGGATCACAACCACCTTGA
TCCGTCGACAAGACCGCTCCCGATACCCGATCAGCCGTCGCCGACTCGAA
CCACTCAGCGTATTAGTCTTCGCCGTCGTAATGGTGACATCTTTCGTCCA
AGTCGCACTCACATCCTTCACACGCCTCATTTCTTCCGACCGCTCCGTCG
TCGATCTATCCCTCCCTTCCATCGCTGTCATGGCCAGCACAGTTATCGTC
AAGCTCATCTGCTGGTTCTGGTGTCGACTGATTAAGAACTCGAGCGTCCA
AGCACTAGCACAAGACGCCATGACGGACGTAATCTTCAACTTGTTCAGTA
TTCTCTTCCCTCTCATCGGCTCCCTGACCACAACCTGGTACATCGACCCG
TTAGGCGGTCTTCTCCTGTCCCTGTACATAATCTACAACTGGAGCGCCAC
AGCCAGCGAACACATCGGCCATCTAACAGGCGCCGCAGCATCACCCAAAG
ACCACAGTATTCTGCTGTACATGACGATGCGGTTCTCGAAAGCAATTCTC
AAGATCCAAGATCTAAAGGCCTATTACGCAGGAGATCGGCTCAACGTCGA
GGTGGATATTGTCCTGGACCCGAAGACCAGACTCCAAGATAGTCATGATG
TTGGGGAGAGTCTGCAGTATATGGTGGAGAGTGTGCCTACGGTGGATAGG
GCATTCGTGCATATTGATTACGATCCGTGGAATATTCCGAGTCATATGAA
CCAGATTGAGGGGTGAATGTCCTCGACACCTCGGTCTAGTACTGTGCCAC
CAATGCTTACCTCTTCGCCGCGATCGGATTCATTCATCCGGGCGAGACAA
CCAAGTCTTGACTTAGAACACGATCTTCTCTCCACCCGTGGCCAACGCCT
CGGGGGACTAATACGACGGCGCTCTCTCAGCGTCCAAAGCGCCGATAATC
CTTATGACAGTGAAAGGCTTGAAGATTCCATTCAAGATCGCGGGGATAGG
CCTGTTGCTTTTGAGCGCGCTAGGCGACTCATCGGCGAGAGCAGGCCTAT
TTATCGTTGGCAACATTTCTATCAGGACCCTACTACGCTGAAGAAAATGC
CAAAGGCCATGCGCGAGTATTACGAGCGCAACAACGATCTGATATCGCAA
TATGTCTTTATTGACAGATTGCTGGACTCCTCTCTCCCCCATCGTCTGAT
TGTGGACTATCACAGCAACCAGCCAGGAGAGCCCCCAGTCTCAACCAACG
GCCGGGCATATGACGCAACCTCCTACGGCACAGGAGATACCAAAGCATCC
GGTAAAATCAAGAGAACTCCCCGAAATCTCTATCGCATTCCCAGCGAGAA
CGAGACATCTCCACTCCTGCCCCCGATGATCGAAGAACGAGTAGCATCAC
CCCCAGACATCATCCCCACAAACGATGAGTTCGTCGACAGCAGCGACCGT
ATAGTCACTGTAGCAATATACGTCAACTTCATCGCCAACGTCCTCCTCCT
AGTCGCAAAGATTATTGCTATGACCATGACAAACTCTCTATCCGTCCTGG
CCAGCTTAGTCGACGGGGCACTGGACTTCCTCAGCACAGCCATAGTCTGG
ATCACAACCACCTTGATCCGTCGACAAGACCGCTCCCGATACCCGATCAG
CCGTCGCCGACTCGAACCACTCAGCGTATTAGTCTTCGCCGTCGTAATGG
TGACATCTTTCGTCCAAGTCGCACTCACATCCTTCACACGCCTCATTTCT
TCCGACCGCTCCGTCGTCGATCTATCCCTCCCTTCCATCGCTGTCATGGC
CAGCACAGTTATCGTCAAGCTCATCTGCTGGTTCTGGTGTCGACTGATTA
AGAACTCGAGCGTCCAAGCACTAGCACAAGACGCCATGACGGACGTAATC
TTCAACTTGTTCAGTATTCTCTTCCCTCTCATCGGCTCCCTGACCACAAC
CTGGTACATCGACCCGTTAGGCGGTCTTCTCCTGTCCCTGTACATAATCT
ACAACTGGAGCGCCACAGCCAGCGAACACATCGGCCATCTAACAGGCGCC
GCAGCATCACCCAAAGACCACAGTATTCTGCTGTACATGACGATGCGGTT
CTCGAAAGCAATTCTCAAGATCCAAGATCTAAAGGCCTATTACGCAGGAG
ATCGGCTCAACGTCGAGGTGGATATTGTCCTGGACCCGAAGACCAGACTC
CAAGATAGTCATGATGTTGGGGAGAGTCTGCAGTATATGGTGGAGAGTGT
GCCTACGGTGGATAGGGCATTCGTGCATATTGATTACGATCCGTGGAATA
TTCCGAGTCATATGAACCAGATTGAGGGGTGAATGTCCTCGACACCTCGG
TCTAGTACTGTGCCACCAATGCTTACCTCTTCGCCGCGATCGGATTCATT
CATCCGGGCGAGACAACCAAGTCTTGACTTAGAACACGATCTTCTCTCCA
CCCGTGGCCAACGCCTCGGGGGACTAATACGACGGCGCTCTCTCAGCGTC
CAAAGCGCCGATAATCCTTATGACAGTGAAAGGCTTGAAGATTCCATTCA
AGATCGCGGGGATAGGCCTGTTGCTTTTGAGCGCGCTAGGCGACTCATCG
GCGAGAGCAGGCCTATTTATCGTTGGCAACATTTCTATCAGGACCCTACT
ACGCTGAAGAAAATGCCAAAGGCCATGCGCGAGTATTACGAGCGCAACAA
CGATCTGATATCGCAATATGTCTTTATTGACAGATTGCTGGACTCCTCTC
TCCCCCATCGTCTGATTGTGGACTATCACAGCAACCAGCCAGGAGAGCCC
CCAGTCTCAACCAACGGCCGGGCATATGACGCAACCTCCTACGGCACAGG
AGATACCAAAGCATCCGGTAAAATCAAGAGAACTCCCCGAAATCTCTATC
GCATTCCCAGCGAGAACGAGACATCTCCACTCCTGCCCCCGATGATCGAA
GAACGAGTAGCATCACCCCCAGACATCATCCCCACAAACGATGAGTTCGT
CGACAGCAGCGACCGTATAGTCACTGTAGCAATATACGTCAACTTCATCG
CCAACGTCCTCCTCCTAGTCGCAAAGATTATTGCTATGACCATGACAAAC
TCTCTATCCGTCCTGGCCAGCTTAGTCGACGGGGCACTGGACTTCCTCAG
CACAGCCATAGTCTGGATCACAACCACCTTGATCCGTCGACAAGACCGCT
CCCGATACCCGATCAGCCGTCGCCGACTCGAACCACTCAGCGTATTAGTC
TTCGCCGTCGTAATGGTGACATCTTTCGTCCAAGTCGCACTCACATCCTT
CACACGCCTCATTTCTTCCGACCGCTCCGTCGTCGATCTATCCCTCCCTT
CCATCGCTGTCATGGCCAGCACAGTTATCGTCAAGCTCATCTGCTGGTTC
TGGTGTCGACTGATTAAGAACTCGAGCGTCCAAGCACTAGCACAAGACGC
CATGACGGACGTAATCTTCAACTTGTTCAGTATTCTCTTCCCTCTCATCG
GCTCCCTGACCACAACCTGGTACATCGACCCGTTAGGCGGTCTTCTCCTG
TCCCTGTACATAATCTACAACTGGAGCGCCACAGCCAGCGAACACATCGG
CCATCTAACAGGCGCCGCAGCATCACCCAAAGACCACAGTATTCTGCTGT
ACATGACGATGCGGTTCTCGAAAGCAATTCTCAAGATCCAAGATCTAAAG
GCCTATTACGCAGGAGATCGGCTCAACGTCGAGGTGGATATTGTCCTGGA
CCCGAAGACCAGACTCCAAGATAGTCATGATGTTGGGGAGAGTCTGCAGT
ATATGGTGGAGAGTGTGCCTACGGTGGATAGGGCATTCGTGCATATTGAT
TACGATCCGTGGAATATTCCGAGTCATATGAACCAGATTGAGGGGTGAAT
GTCCTCGACACCTCGGTCTAGTACTGTGCCACCAATGCTTACCTCTTCGC
CGCGATCGGATTCATTCATCCGGGCGAGACAACCAAGTCTTGACTTAGAA
CACGATCTTCTCTCCACCCGTGGCCAACGCCTCGGGGGACTAATACGACG
GCGCTCTCTCAGCGTCCAAAGCGCCGATAATCCTTATGACAGTGAAAGGC
TTGAAGATTCCATTCAAGATCGCGGGGATAGGCCTGTTGCTTTTGAGCGC
GCTAGGCGACTCATCGGCGAGAGCAGGCCTATTTATCGTTGGCAACATTT
CTATCAGGACCCTACTACGCTGAAGAAAATGCCAAAGGCCATGCGCGAGT
ATTACGAGCGCAACAACGATCTGATATCGCAATATGTCTTTATTGACAGA
TTGCTGGACTCCTCTCTCCCCCATCGTCTGATTGTGGACTATCACAGCAA
CCAGCCAGGAGAGCCCCCAGTCTCAACCAACGGCCGGGCATATGACGCAA
CCTCCTACGGCACAGGAGATACCAAAGCATCCGGTAAAATCAAGAGAACT
CCCCGAAATCTCTATCGCATTCCCAGCGAGAACGAGACATCTCCACTCCT
GCCCCCGATGATCGAAGAACGAGTAGCATCACCCCCAGACATCATCCCCA
CAAACGATGAGTTCGTCGACAGCAGCGACCGTATAGTCACTGTAGCAATA
TACGTCAACTTCATCGCCAACGTCCTCCTCCTAGTCGCAAAGATTATTGC
TATGACCATGACAAACTCTCTATCCGTCCTGGCCAGCTTAGTCGACGGGG
CACTGGACTTCCTCAGCACAGCCATAGTCTGGATCACAACCACCTTGATC
CGTCGACAAGACCGCTCCCGATACCCGATCAGCCGTCGCCGACTCGAACC
ACTCAGCGTATTAGTCTTCGCCGTCGTAATGGTGACATCTTTCGTCCAAG
TCGCACTCACATCCTTCACACGCCTCATTTCTTCCGACCGCTCCGTCGTC
GATCTATCCCTCCCTTCCATCGCTGTCATGGCCAGCACAGTTATCGTCAA
GCTCATCTGCTGGTTCTGGTGTCGACTGATTAAGAACTCGAGCGTCCAAG
CACTAGCACAAGACGCCATGACGGACGTAATCTTCAACTTGTTCAGTATT
CTCTTCCCTCTCATCGGCTCCCTGACCACAACCTGGTACATCGACCCGTT
AGGCGGTCTTCTCCTGTCCCTGTACATAATCTACAACTGGAGCGCCACAG
CCAGCGAACACATCGGCCATCTAACAGGCGCCGCAGCATCACCCAAAGAC
CACAGTATTCTGCTGTACATGACGATGCGGTTCTCGAAAGCAATTCTCAA
GATCCAAGATCTAAAGGCCTATTACGCAGGAGATCGGCTCAACGTCGAGG
TGGATATTGTCCTGGACCCGAAGACCAGACTCCAAGATAGTCATGATGTT
GGGGAGAGTCTGCAGTATATGGTGGAGAGTGTGCCTACGGTGGATAGGGC
ATTCGTGCATATTGATTACGATCCGTGGAATATTCCGAGTCATATGAACC
AGATTGAGGGGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
| GO:0006812 | cation transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008324 | cation transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_2.5 |
| Note | antiSMASH:Cluster_2.4 |
| DBxref | InterPro:IPR036837 |
| DBxref | InterPro:IPR027470 |
| DBxref | InterPro:IPR027469 |
| DBxref | InterPro:IPR002524 |
| DBxref | PFAM:PF16916 |
| DBxref | PFAM:PF01545 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:1994635..1996378 + |
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