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CBS51388_001927-T1, CBS51388_001927-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001927-T1
Unique NameCBS51388_001927-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:2158115..2160022-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001927-T1 ID=CBS51388_001927-T1|Name=CBS51388_001927-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1908bp|location=Sequence derived from alignment at An02:2158115..2160022- (Aspergillus niger CBS 513.88)
ATGAGTGAAACGTGCGCCAATCCCCTACTACTGGGGTGGATCAAAGAATG
GCTAGACGAGGCTCGAGAACGCAACAGCAAGGGCGCCATAGTGTCAGTAC
TATTTCATGACGCGATACAATGATCGAATTTGATGCTGAATTATGCACAG
ATACAAAAAGGCGTACGAGTCGATGAAAGCTTGTCCCTTAGTTTTCCAAC
ACCCCTCCGAGGCTCAGCAGCTAAATGGACTCGGCCCAAAACTATGTGAT
CGCTTGACCGAAAAGCTAAAGGCTTACTGCGAAGAAAATGCACTTCCAAT
GCCCGAACATCCTCAAAAATGTAAGTCTCGGTAGTACTGTCGTGTCTGAG
CAGGCCCTAAAAATCGTAGCGGCAAGCAGCAAAAGAGCATCCGATGAGGG
CACAGCAGAAAGTCAGCCAGCCAAGAAACCTCGAAAGGCAAGACCTTATG
TCCCGACTTTACGATCTGGCCCGTATGCGTTGATTTTAGCCCTGGCAACC
CTTAATGAGAACTCTTCTCAAGGCCTAACCAAGGCACAACTGATTGACTT
GGCGCAGCCGAATTGCGATAGTTCATTCACGGCACCTGCCGAGTCGTCCA
AATTCCATACTGCCTGGAGCTCAATGAAGACGCTCTTGCAGAAGGAGATT
GTATATGATTTCGGGCGTCCTCTGAAGAAGTACGCACTCACAGAAGAGGG
ATGGGAGGTGGCGAAAAGGATGAAGAAGGTCGCCCTGCCGTCAAATCAAG
GCACTTTGGCGTTTGGGAATCAATCGGTAACAAATCCAATACCTAATATG
CTATGACGATGTCTAACCTGCGTAGGGGCCAAGCACAAGCCATACTGGGG
ACACCCAGTTGCAGGACAACATGGGTGGCAACGGCACAGAGCTAATCGAC
GATGAGGAGACACCCACAGCCCATAACGATACCCAAAGATGGGAACCTGC
TTCTGACGGAACAGTAACTCCCATAACAATCCCTCCCGACAGCTTTACGG
TCCAGCTGGTTCTGGATAACCGCGAAGTTCGATCATCCAAAGACAGAGAT
TACATCACCAACGAACTACACAAGAAGGGAGCCAGTCCCGAGGTGCGCGC
ACTAGAACTAGGCGACGTCATGTGGGTAGCTAAATTCCACAATCCGACGT
TCCTCTCCCAGTACGGCGAGGAAGGCGACGAAGTCATGCTCGACTGGATC
GTTGAGCGCAAAAGAATCGACGATCTCATCAGCTCCATGAAAGACGGACG
GTTCCACGAACAGAAGTTCCGTCTCCGTCGTTCAGGAGTGAAAAACGTCA
TCTACCTCATTGAAGAATTCACCGTCCCCTCAGACCCTAATACCGCCATG
GCCGGCAAGTACAACGAAATGGTAGCGTCCGCCATAGCCTCGACGCAAGT
CGTCAACGGCTACTTTGTTAAGAGAACTAAGAACCTCGACGATACAATTC
AATACCTAGCTAGAATGACCCTCCTGCTTCGCAGAATGTTCAATTCATCT
GCCGGCGGTGTACCATCCTCCACCCTCAGTCTAATCCCTAGTCGCCAGCT
CTCCTCCTCCCAATCATACCTCACGGCCCTGGAACGTCTCCGGGCAGAGA
GCCCCAAGACCACTTACGCCGTCACCTTCTCCACATTTTCCGCTCTAACC
TCCAAATCCGACGTCTTGACCCTCCGAGACGTGTTCCTGAAAATGCTCAT
GTGCATCCGGGGCGTAACGGGCGAAAAGGCACTCGAGATTCAACGGCGGT
GGCCGACTCCGCAGGCATTCATCCGTGCTTTTGAAGAGCTTGATCCTCAG
GACCGGGATAATATGGTTTCAGAACGGATGCAAACGCTCGTTGGACGGAA
GAAGATCGCGAAGGTTCTGAGCAAGAAAATCGCAGAGGTATGGGGTGAGG
ATGGGTGA
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Coding sequence (CDS) from alignment at An02:2158115..2160022-

>CBS51388_001927-T1 ID=CBS51388_001927-T1|Name=CBS51388_001927-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7008bp|location=Sequence derived from alignment at An02:2158115..2160022- (Aspergillus niger CBS 513.88)
GGGCCAAGCACAAGCCATACTGGGGACACCCAGTTGCAGGACAACATGGG
TGGCAACGGCACAGAGCTAATCGACGATGAGGAGACACCCACAGCCCATA
ACGATACCCAAAGATGGGAACCTGCTTCTGACGGAACAGTAACTCCCATA
ACAATCCCTCCCGACAGCTTTACGGTCCAGCTGGTTCTGGATAACCGCGA
AGTTCGATCATCCAAAGACAGAGATTACATCACCAACGAACTACACAAGA
AGGGAGCCAGTCCCGAGGTGCGCGCACTAGAACTAGGCGACGTCATGTGG
GTAGCTAAATTCCACAATCCGACGTTCCTCTCCCAGTACGGCGAGGAAGG
CGACGAAGTCATGCTCGACTGGATCGTTGAGCGCAAAAGAATCGACGATC
TCATCAGCTCCATGAAAGACGGACGGTTCCACGAACAGAAGTTCCGTCTC
CGTCGTTCAGGAGTGAAAAACGTCATCTACCTCATTGAAGAATTCACCGT
CCCCTCAGACCCTAATACCGCCATGGCCGGCAAGTACAACGAAATGGTAG
CGTCCGCCATAGCCTCGACGCAAGTCGTCAACGGCTACTTTGTTAAGAGA
ACTAAGAACCTCGACGATACAATTCAATACCTAGCTAGAATGACCCTCCT
GCTTCGCAGAATGTTCAATTCATCTGCCGGCGGTGTACCATCCTCCACCC
TCAGTCTAATCCCTAGTCGCCAGCTCTCCTCCTCCCAATCATACCTCACG
GCCCTGGAACGTCTCCGGGCAGAGAGCCCCAAGACCACTTACGCCGTCAC
CTTCTCCACATTTTCCGCTCTAACCTCCAAATCCGACGTCTTGACCCTCC
GAGACGTGTTCCTGAAAATGCTCATGTGCATCCGGGGCGTAACGGGCGAA
AAGGCACTCGAGATTCAACGGCGGTGGCCGACTCCGCAGGCATTCATCCG
TGCTTTTGAAGAGCTTGATCCTCAGGACCGGGATAATATGGTTTCAGAAC
GGATGCAAACGCTCGTTGGACGGAAGAAGATCGCGAAGGTTCTGAGCAAG
AAAATCGCAGAGGTATGGGGTGAGGATGGGTGACGGCAAGCAGCAAAAGA
GCATCCGATGAGGGCACAGCAGAAAGTCAGCCAGCCAAGAAACCTCGAAA
GGCAAGACCTTATGTCCCGACTTTACGATCTGGCCCGTATGCGTTGATTT
TAGCCCTGGCAACCCTTAATGAGAACTCTTCTCAAGGCCTAACCAAGGCA
CAACTGATTGACTTGGCGCAGCCGAATTGCGATAGTTCATTCACGGCACC
TGCCGAGTCGTCCAAATTCCATACTGCCTGGAGCTCAATGAAGACGCTCT
TGCAGAAGGAGATTGTATATGATTTCGGGCGTCCTCTGAAGAAGTACGCA
CTCACAGAAGAGGGATGGGAGGTGGCGAAAAGGATGAAGAAGGTCGCCCT
GCCGTCAAATCAAGGCACTTTGGCGTTTGGGAATCAATCGATACAAAAAG
GCGTACGAGTCGATGAAAGCTTGTCCCTTAGTTTTCCAACACCCCTCCGA
GGCTCAGCAGCTAAATGGACTCGGCCCAAAACTATGTGATCGCTTGACCG
AAAAGCTAAAGGCTTACTGCGAAGAAAATGCACTTCCAATGCCCGAACAT
CCTCAAAAATATGAGTGAAACGTGCGCCAATCCCCTACTACTGGGGTGGA
TCAAAGAATGGCTAGACGAGGCTCGAGAACGCAACAGCAAGGGCGCCATA
GTGGGCCAAGCACAAGCCATACTGGGGACACCCAGTTGCAGGACAACATG
GGTGGCAACGGCACAGAGCTAATCGACGATGAGGAGACACCCACAGCCCA
TAACGATACCCAAAGATGGGAACCTGCTTCTGACGGAACAGTAACTCCCA
TAACAATCCCTCCCGACAGCTTTACGGTCCAGCTGGTTCTGGATAACCGC
GAAGTTCGATCATCCAAAGACAGAGATTACATCACCAACGAACTACACAA
GAAGGGAGCCAGTCCCGAGGTGCGCGCACTAGAACTAGGCGACGTCATGT
GGGTAGCTAAATTCCACAATCCGACGTTCCTCTCCCAGTACGGCGAGGAA
GGCGACGAAGTCATGCTCGACTGGATCGTTGAGCGCAAAAGAATCGACGA
TCTCATCAGCTCCATGAAAGACGGACGGTTCCACGAACAGAAGTTCCGTC
TCCGTCGTTCAGGAGTGAAAAACGTCATCTACCTCATTGAAGAATTCACC
GTCCCCTCAGACCCTAATACCGCCATGGCCGGCAAGTACAACGAAATGGT
AGCGTCCGCCATAGCCTCGACGCAAGTCGTCAACGGCTACTTTGTTAAGA
GAACTAAGAACCTCGACGATACAATTCAATACCTAGCTAGAATGACCCTC
CTGCTTCGCAGAATGTTCAATTCATCTGCCGGCGGTGTACCATCCTCCAC
CCTCAGTCTAATCCCTAGTCGCCAGCTCTCCTCCTCCCAATCATACCTCA
CGGCCCTGGAACGTCTCCGGGCAGAGAGCCCCAAGACCACTTACGCCGTC
ACCTTCTCCACATTTTCCGCTCTAACCTCCAAATCCGACGTCTTGACCCT
CCGAGACGTGTTCCTGAAAATGCTCATGTGCATCCGGGGCGTAACGGGCG
AAAAGGCACTCGAGATTCAACGGCGGTGGCCGACTCCGCAGGCATTCATC
CGTGCTTTTGAAGAGCTTGATCCTCAGGACCGGGATAATATGGTTTCAGA
ACGGATGCAAACGCTCGTTGGACGGAAGAAGATCGCGAAGGTTCTGAGCA
AGAAAATCGCAGAGGTATGGGGTGAGGATGGGTGACGGCAAGCAGCAAAA
GAGCATCCGATGAGGGCACAGCAGAAAGTCAGCCAGCCAAGAAACCTCGA
AAGGCAAGACCTTATGTCCCGACTTTACGATCTGGCCCGTATGCGTTGAT
TTTAGCCCTGGCAACCCTTAATGAGAACTCTTCTCAAGGCCTAACCAAGG
CACAACTGATTGACTTGGCGCAGCCGAATTGCGATAGTTCATTCACGGCA
CCTGCCGAGTCGTCCAAATTCCATACTGCCTGGAGCTCAATGAAGACGCT
CTTGCAGAAGGAGATTGTATATGATTTCGGGCGTCCTCTGAAGAAGTACG
CACTCACAGAAGAGGGATGGGAGGTGGCGAAAAGGATGAAGAAGGTCGCC
CTGCCGTCAAATCAAGGCACTTTGGCGTTTGGGAATCAATCGATACAAAA
AGGCGTACGAGTCGATGAAAGCTTGTCCCTTAGTTTTCCAACACCCCTCC
GAGGCTCAGCAGCTAAATGGACTCGGCCCAAAACTATGTGATCGCTTGAC
CGAAAAGCTAAAGGCTTACTGCGAAGAAAATGCACTTCCAATGCCCGAAC
ATCCTCAAAAATATGAGTGAAACGTGCGCCAATCCCCTACTACTGGGGTG
GATCAAAGAATGGCTAGACGAGGCTCGAGAACGCAACAGCAAGGGCGCCA
TAGTGGGCCAAGCACAAGCCATACTGGGGACACCCAGTTGCAGGACAACA
TGGGTGGCAACGGCACAGAGCTAATCGACGATGAGGAGACACCCACAGCC
CATAACGATACCCAAAGATGGGAACCTGCTTCTGACGGAACAGTAACTCC
CATAACAATCCCTCCCGACAGCTTTACGGTCCAGCTGGTTCTGGATAACC
GCGAAGTTCGATCATCCAAAGACAGAGATTACATCACCAACGAACTACAC
AAGAAGGGAGCCAGTCCCGAGGTGCGCGCACTAGAACTAGGCGACGTCAT
GTGGGTAGCTAAATTCCACAATCCGACGTTCCTCTCCCAGTACGGCGAGG
AAGGCGACGAAGTCATGCTCGACTGGATCGTTGAGCGCAAAAGAATCGAC
GATCTCATCAGCTCCATGAAAGACGGACGGTTCCACGAACAGAAGTTCCG
TCTCCGTCGTTCAGGAGTGAAAAACGTCATCTACCTCATTGAAGAATTCA
CCGTCCCCTCAGACCCTAATACCGCCATGGCCGGCAAGTACAACGAAATG
GTAGCGTCCGCCATAGCCTCGACGCAAGTCGTCAACGGCTACTTTGTTAA
GAGAACTAAGAACCTCGACGATACAATTCAATACCTAGCTAGAATGACCC
TCCTGCTTCGCAGAATGTTCAATTCATCTGCCGGCGGTGTACCATCCTCC
ACCCTCAGTCTAATCCCTAGTCGCCAGCTCTCCTCCTCCCAATCATACCT
CACGGCCCTGGAACGTCTCCGGGCAGAGAGCCCCAAGACCACTTACGCCG
TCACCTTCTCCACATTTTCCGCTCTAACCTCCAAATCCGACGTCTTGACC
CTCCGAGACGTGTTCCTGAAAATGCTCATGTGCATCCGGGGCGTAACGGG
CGAAAAGGCACTCGAGATTCAACGGCGGTGGCCGACTCCGCAGGCATTCA
TCCGTGCTTTTGAAGAGCTTGATCCTCAGGACCGGGATAATATGGTTTCA
GAACGGATGCAAACGCTCGTTGGACGGAAGAAGATCGCGAAGGTTCTGAG
CAAGAAAATCGCAGAGGTATGGGGTGAGGATGGGTGACGGCAAGCAGCAA
AAGAGCATCCGATGAGGGCACAGCAGAAAGTCAGCCAGCCAAGAAACCTC
GAAAGGCAAGACCTTATGTCCCGACTTTACGATCTGGCCCGTATGCGTTG
ATTTTAGCCCTGGCAACCCTTAATGAGAACTCTTCTCAAGGCCTAACCAA
GGCACAACTGATTGACTTGGCGCAGCCGAATTGCGATAGTTCATTCACGG
CACCTGCCGAGTCGTCCAAATTCCATACTGCCTGGAGCTCAATGAAGACG
CTCTTGCAGAAGGAGATTGTATATGATTTCGGGCGTCCTCTGAAGAAGTA
CGCACTCACAGAAGAGGGATGGGAGGTGGCGAAAAGGATGAAGAAGGTCG
CCCTGCCGTCAAATCAAGGCACTTTGGCGTTTGGGAATCAATCGATACAA
AAAGGCGTACGAGTCGATGAAAGCTTGTCCCTTAGTTTTCCAACACCCCT
CCGAGGCTCAGCAGCTAAATGGACTCGGCCCAAAACTATGTGATCGCTTG
ACCGAAAAGCTAAAGGCTTACTGCGAAGAAAATGCACTTCCAATGCCCGA
ACATCCTCAAAAATATGAGTGAAACGTGCGCCAATCCCCTACTACTGGGG
TGGATCAAAGAATGGCTAGACGAGGCTCGAGAACGCAACAGCAAGGGCGC
CATAGTGGGCCAAGCACAAGCCATACTGGGGACACCCAGTTGCAGGACAA
CATGGGTGGCAACGGCACAGAGCTAATCGACGATGAGGAGACACCCACAG
CCCATAACGATACCCAAAGATGGGAACCTGCTTCTGACGGAACAGTAACT
CCCATAACAATCCCTCCCGACAGCTTTACGGTCCAGCTGGTTCTGGATAA
CCGCGAAGTTCGATCATCCAAAGACAGAGATTACATCACCAACGAACTAC
ACAAGAAGGGAGCCAGTCCCGAGGTGCGCGCACTAGAACTAGGCGACGTC
ATGTGGGTAGCTAAATTCCACAATCCGACGTTCCTCTCCCAGTACGGCGA
GGAAGGCGACGAAGTCATGCTCGACTGGATCGTTGAGCGCAAAAGAATCG
ACGATCTCATCAGCTCCATGAAAGACGGACGGTTCCACGAACAGAAGTTC
CGTCTCCGTCGTTCAGGAGTGAAAAACGTCATCTACCTCATTGAAGAATT
CACCGTCCCCTCAGACCCTAATACCGCCATGGCCGGCAAGTACAACGAAA
TGGTAGCGTCCGCCATAGCCTCGACGCAAGTCGTCAACGGCTACTTTGTT
AAGAGAACTAAGAACCTCGACGATACAATTCAATACCTAGCTAGAATGAC
CCTCCTGCTTCGCAGAATGTTCAATTCATCTGCCGGCGGTGTACCATCCT
CCACCCTCAGTCTAATCCCTAGTCGCCAGCTCTCCTCCTCCCAATCATAC
CTCACGGCCCTGGAACGTCTCCGGGCAGAGAGCCCCAAGACCACTTACGC
CGTCACCTTCTCCACATTTTCCGCTCTAACCTCCAAATCCGACGTCTTGA
CCCTCCGAGACGTGTTCCTGAAAATGCTCATGTGCATCCGGGGCGTAACG
GGCGAAAAGGCACTCGAGATTCAACGGCGGTGGCCGACTCCGCAGGCATT
CATCCGTGCTTTTGAAGAGCTTGATCCTCAGGACCGGGATAATATGGTTT
CAGAACGGATGCAAACGCTCGTTGGACGGAAGAAGATCGCGAAGGTTCTG
AGCAAGAAAATCGCAGAGGTATGGGGTGAGGATGGGTGACGGCAAGCAGC
AAAAGAGCATCCGATGAGGGCACAGCAGAAAGTCAGCCAGCCAAGAAACC
TCGAAAGGCAAGACCTTATGTCCCGACTTTACGATCTGGCCCGTATGCGT
TGATTTTAGCCCTGGCAACCCTTAATGAGAACTCTTCTCAAGGCCTAACC
AAGGCACAACTGATTGACTTGGCGCAGCCGAATTGCGATAGTTCATTCAC
GGCACCTGCCGAGTCGTCCAAATTCCATACTGCCTGGAGCTCAATGAAGA
CGCTCTTGCAGAAGGAGATTGTATATGATTTCGGGCGTCCTCTGAAGAAG
TACGCACTCACAGAAGAGGGATGGGAGGTGGCGAAAAGGATGAAGAAGGT
CGCCCTGCCGTCAAATCAAGGCACTTTGGCGTTTGGGAATCAATCGATAC
AAAAAGGCGTACGAGTCGATGAAAGCTTGTCCCTTAGTTTTCCAACACCC
CTCCGAGGCTCAGCAGCTAAATGGACTCGGCCCAAAACTATGTGATCGCT
TGACCGAAAAGCTAAAGGCTTACTGCGAAGAAAATGCACTTCCAATGCCC
GAACATCCTCAAAAATATGAGTGAAACGTGCGCCAATCCCCTACTACTGG
GGTGGATCAAAGAATGGCTAGACGAGGCTCGAGAACGCAACAGCAAGGGC
GCCATAGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0004518nuclease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MUS81CBS51388_001927Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001927-T1CBS51388_001927-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001927-T1.cdsCBS51388_001927-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001927-T1.exon4CBS51388_001927-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_001927-T1.exon3CBS51388_001927-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_001927-T1.exon2CBS51388_001927-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001927-T1.exon1CBS51388_001927-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR011335
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR027421
DBxrefInterPro:IPR006166
DBxrefPFAM:PF02732
ProductCrossover junction endonuclease mus81
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:2158115..2160022 -
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