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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:2165159..2167398+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001930-T1 ID=CBS51388_001930-T1|Name=CBS51388_001930-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2240bp|location=Sequence derived from alignment at An02:2165159..2167398+ (Aspergillus niger CBS 513.88)
ATGAAGCGCTCTTCGCAAGATGCCGACTTAGAGGCCCCACGGCCACATGA
ACGTCGACCATCCCTCGTTCCTGACGGACGGCCTGCGCCACCCAAGATCT
CCAAGGCCCGCGCTTGTGAGTACTCATAGGCCGAACTGCAACCGAGGCCC
CAGCGATCAGCTCCAAGGTGTGCTTGGGCTTGATGAAACTAGAAGTATGA
AGCTAATGCTTTGGGTATATAGGCGCGGAGTGTAAGCGTCATAAAATACG
CTGCGAGTTCAAGTCAGGCGAGGCGAGTTGCACAAAATGCATTCGCAGCG
GGATCAAATGTGTAGTCAATGACTTCTCGCAGAAGTTTGTCGACGATGAT
GTAATGTGAGTCCTGGATATGCCTATGGCTTGCTCCAGAGAACTGTGAAC
TATAAGAGCTGATTGGATTCTCCTGCGCTGGGTACAGGTGGAAATCACAA
GCATCGGCTACCATACAACAGCTTCAAGCGGCAGTCTCGCATCTTCTACA
TCAAGGAGGTCTTCCAGATCTATCGACCTTCATCTCTGGTGACACCCAGA
ACGGCCCCAGTCCTGTGGCATCTCAGTCAGAGCGTCGTTTCTCATCCGAG
GCCTCACCCACCGATGTCAAACCCAGGGAGCCGGGTATTGTTATGGATGT
GACCCGAGAGCCTTCCCAGGAACCAGACCTACAAGACCGAGAGCTAGTAC
CAGCACCAATGCGCAGTCTATACGAGGTCACGAAGCTCCGCAACTTGCGG
AACAACCCCATCGAACAACCGAAGCTGACACTTCTGGAGGAGGACTTCAT
CTCCAGAGGGCTGATTTCGCTTCATGAAGCCGAAGAGCTGTTTGCCTACT
TCAGCAGGACTATGAATCAGCTTCTCTGGGGAGGGATAGTCTTGGTGCAT
CGTGATCTCACGTCTGTCCGACGAGCATCGACGCTACTGTCAGCGGCTGT
TCTAACCGTCGCTGCCCTCCATATACCGAATCGAACCGAGACACTCAACC
GATGCTACAATGAGTATGTATCGCTTGTGTCGAGCATGTCTTTGACGAGA
GCTCATACCCTCGATGATATTCGCGCTCTTTGTGTCGGAGCTTTCTGGCT
ATCCGAATTAAGTTGGAAACTTTCTGGGCACGCTGTTCGAATAGCCACAG
AGTTGGGTCTTCACCAAAGCTATCATAAGCTAATGCGTGGTCATAACGAT
CAGTATGAACGCGCTCAGCTCTGGTATCTTTTGTATGTGTGTGACCACCA
TTTTAGCATCGCCTATGGACGTCCACCAGTCATTCATGAGGATGCAGCGA
TCAAGAACTACGAATCTTTTCTCCAGTCACCAATGGTAGTACCCGGGGAT
ATCCGGCTACTAGCACAAGTGGCCTTGTTTATGATTCTGACCGAAGCATA
TCGGACATTTGGTACCGACACAGAACAAGCCCTCACAGAAGAAGACTTTG
GGCAGTTACGGGTCTACAATGTAGCTATAGACCAATGGCGGCTACTGTGG
CAACCCCGATCTGGTATGCGCCCTCAAGATTTGGCATTGACCTGAGATTA
TTTTGATAAACTGACCGTCGTGGCGCTTGGACTGCAGCCGATAGCCCCTA
TGTCCGAACGTATCCCTCGAAAGGGGTTGTCCTTCACTATCACTTCGCCA
AATTTCAACTCAACTCCCTCTCTCTGCGGGCTTTGTCTCCGACAAATACC
CCGGTGTTTTCTATGGACCGCAAAGAGTCGGCTAATATTGCCATCTCATC
CGCTATGGCTTGTTTGAATATGGTGTTGGAGGAGCCGGACATTCGCGATG
CCATTGTTGGCGTTCCGATTTTTACCCACACGATGGTCACATTCTCCGCC
GTGTTTCTCTTGAAAGTCGCGATAAACTGGAACTCTGCATATCTTAGCCT
CGACGGCCGCCAGGTGCGACGCCTGGTAGAGCGGGTGATTGAGCTGCTGA
ACTGTGTTTCTGCAGGGGAGAGACATCTGACGAGACATATTGCCCGAGGC
CTTGGTAAGATGTTGGAGCGTTTCGACTCTTGGGACGCATGGCAAGCAGG
AGGGCCACCTGTTGTAGCATCCGGGGGTGTTGAGCGACCAGGAAGCGATG
TTCCTGGGGGTGCCAATGCCATGGCCCAGGGGTTTCCCCCGCCGGATTTA
ATCTATGATATGGTTGGTACATACGGGTTTGGGTTAGATGAAAATCTCCT
AGACCCTAGCATGGCTAGTTTTGAATTCTTAGCACAATGA back to topCoding sequence (CDS) from alignment at An02:2165159..2167398+ >CBS51388_001930-T1 ID=CBS51388_001930-T1|Name=CBS51388_001930-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7908bp|location=Sequence derived from alignment at An02:2165159..2167398+ (Aspergillus niger CBS 513.88)
ATGAAGCGCTCTTCGCAAGATGCCGACTTAGAGGCCCCACGGCCACATGA
ACGTCGACCATCCCTCGTTCCTGACGGACGGCCTGCGCCACCCAAGATCT
CCAAGGCCCGCGCTTGCGCGGAGTGTAAGCGTCATAAAATACGCTGCGAG
TTCAAGTCAGGCGAGGCGAGTTGCACAAAATGCATTCGCAGCGGGATCAA
ATGTGTAGTCAATGACTTCTCGCAGAAGTTTGTCGACGATGATGTAATGT
GGAAATCACAAGCATCGGCTACCATACAACAGCTTCAAGCGGCAGTCTCG
CATCTTCTACATCAAGGAGGTCTTCCAGATCTATCGACCTTCATCTCTGG
TGACACCCAGAACGGCCCCAGTCCTGTGGCATCTCAGTCAGAGCGTCGTT
TCTCATCCGAGGCCTCACCCACCGATGTCAAACCCAGGGAGCCGGGTATT
GTTATGGATGTGACCCGAGAGCCTTCCCAGGAACCAGACCTACAAGACCG
AGAGCTAGTACCAGCACCAATGCGCAGTCTATACGAGGTCACGAAGCTCC
GCAACTTGCGGAACAACCCCATCGAACAACCGAAGCTGACACTTCTGGAG
GAGGACTTCATCTCCAGAGGGCTGATTTCGCTTCATGAAGCCGAAGAGCT
GTTTGCCTACTTCAGCAGGACTATGAATCAGCTTCTCTGGGGAGGGATAG
TCTTGGTGCATCGTGATCTCACGTCTGTCCGACGAGCATCGACGCTACTG
TCAGCGGCTGTTCTAACCGTCGCTGCCCTCCATATACCGAATCGAACCGA
GACACTCAACCGATGCTACAATGAGTATGTATCGCTTGTGTCGAGCATGT
CTTTGACGAGAGCTCATACCCTCGATGATATTCGCGCTCTTTGTGTCGGA
GCTTTCTGGCTATCCGAATTAAGTTGGAAACTTTCTGGGCACGCTGTTCG
AATAGCCACAGAGTTGGGTCTTCACCAAAGCTATCATAAGCTAATGCGTG
GTCATAACGATCAGTATGAACGCGCTCAGCTCTGGTATCTTTTGTATGTG
TGTGACCACCATTTTAGCATCGCCTATGGACGTCCACCAGTCATTCATGA
GGATGCAGCGATCAAGAACTACGAATCTTTTCTCCAGTCACCAATGGTAG
TACCCGGGGATATCCGGCTACTAGCACAAGTGGCCTTGTTTATGATTCTG
ACCGAAGCATATCGGACATTTGGTACCGACACAGAACAAGCCCTCACAGA
AGAAGACTTTGGGCAGTTACGGGTCTACAATGTAGCTATAGACCAATGGC
GGCTACTGTGGCAACCCCGATCTGCCGATAGCCCCTATGTCCGAACGTAT
CCCTCGAAAGGGGTTGTCCTTCACTATCACTTCGCCAAATTTCAACTCAA
CTCCCTCTCTCTGCGGGCTTTGTCTCCGACAAATACCCCGGTGTTTTCTA
TGGACCGCAAAGAGTCGGCTAATATTGCCATCTCATCCGCTATGGCTTGT
TTGAATATGGTGTTGGAGGAGCCGGACATTCGCGATGCCATTGTTGGCGT
TCCGATTTTTACCCACACGATGGTCACATTCTCCGCCGTGTTTCTCTTGA
AAGTCGCGATAAACTGGAACTCTGCATATCTTAGCCTCGACGGCCGCCAG
GTGCGACGCCTGGTAGAGCGGGTGATTGAGCTGCTGAACTGTGTTTCTGC
AGGGGAGAGACATCTGACGAGACATATTGCCCGAGGCCTTGGTAAGATGT
TGGAGCGTTTCGACTCTTGGGACGCATGGCAAGCAGGAGGGCCACCTGTT
GTAGCATCCGGGGGTGTTGAGCGACCAGGAAGCGATGTTCCTGGGGGTGC
CAATGCCATGGCCCAGGGGTTTCCCCCGCCGGATTTAATCTATGATATGG
TTGGTACATACGGGTTTGGGTTAGATGAAAATCTCCTAGACCCTAGCATG
GCTAGTTTTGAATTCTTAGCACAATGAATGAAGCGCTCTTCGCAAGATGC
CGACTTAGAGGCCCCACGGCCACATGAACGTCGACCATCCCTCGTTCCTG
ACGGACGGCCTGCGCCACCCAAGATCTCCAAGGCCCGCGCTTGCGCGGAG
TGTAAGCGTCATAAAATACGCTGCGAGTTCAAGTCAGGCGAGGCGAGTTG
CACAAAATGCATTCGCAGCGGGATCAAATGTGTAGTCAATGACTTCTCGC
AGAAGTTTGTCGACGATGATGTAATGTGGAAATCACAAGCATCGGCTACC
ATACAACAGCTTCAAGCGGCAGTCTCGCATCTTCTACATCAAGGAGGTCT
TCCAGATCTATCGACCTTCATCTCTGGTGACACCCAGAACGGCCCCAGTC
CTGTGGCATCTCAGTCAGAGCGTCGTTTCTCATCCGAGGCCTCACCCACC
GATGTCAAACCCAGGGAGCCGGGTATTGTTATGGATGTGACCCGAGAGCC
TTCCCAGGAACCAGACCTACAAGACCGAGAGCTAGTACCAGCACCAATGC
GCAGTCTATACGAGGTCACGAAGCTCCGCAACTTGCGGAACAACCCCATC
GAACAACCGAAGCTGACACTTCTGGAGGAGGACTTCATCTCCAGAGGGCT
GATTTCGCTTCATGAAGCCGAAGAGCTGTTTGCCTACTTCAGCAGGACTA
TGAATCAGCTTCTCTGGGGAGGGATAGTCTTGGTGCATCGTGATCTCACG
TCTGTCCGACGAGCATCGACGCTACTGTCAGCGGCTGTTCTAACCGTCGC
TGCCCTCCATATACCGAATCGAACCGAGACACTCAACCGATGCTACAATG
AGTATGTATCGCTTGTGTCGAGCATGTCTTTGACGAGAGCTCATACCCTC
GATGATATTCGCGCTCTTTGTGTCGGAGCTTTCTGGCTATCCGAATTAAG
TTGGAAACTTTCTGGGCACGCTGTTCGAATAGCCACAGAGTTGGGTCTTC
ACCAAAGCTATCATAAGCTAATGCGTGGTCATAACGATCAGTATGAACGC
GCTCAGCTCTGGTATCTTTTGTATGTGTGTGACCACCATTTTAGCATCGC
CTATGGACGTCCACCAGTCATTCATGAGGATGCAGCGATCAAGAACTACG
AATCTTTTCTCCAGTCACCAATGGTAGTACCCGGGGATATCCGGCTACTA
GCACAAGTGGCCTTGTTTATGATTCTGACCGAAGCATATCGGACATTTGG
TACCGACACAGAACAAGCCCTCACAGAAGAAGACTTTGGGCAGTTACGGG
TCTACAATGTAGCTATAGACCAATGGCGGCTACTGTGGCAACCCCGATCT
GCCGATAGCCCCTATGTCCGAACGTATCCCTCGAAAGGGGTTGTCCTTCA
CTATCACTTCGCCAAATTTCAACTCAACTCCCTCTCTCTGCGGGCTTTGT
CTCCGACAAATACCCCGGTGTTTTCTATGGACCGCAAAGAGTCGGCTAAT
ATTGCCATCTCATCCGCTATGGCTTGTTTGAATATGGTGTTGGAGGAGCC
GGACATTCGCGATGCCATTGTTGGCGTTCCGATTTTTACCCACACGATGG
TCACATTCTCCGCCGTGTTTCTCTTGAAAGTCGCGATAAACTGGAACTCT
GCATATCTTAGCCTCGACGGCCGCCAGGTGCGACGCCTGGTAGAGCGGGT
GATTGAGCTGCTGAACTGTGTTTCTGCAGGGGAGAGACATCTGACGAGAC
ATATTGCCCGAGGCCTTGGTAAGATGTTGGAGCGTTTCGACTCTTGGGAC
GCATGGCAAGCAGGAGGGCCACCTGTTGTAGCATCCGGGGGTGTTGAGCG
ACCAGGAAGCGATGTTCCTGGGGGTGCCAATGCCATGGCCCAGGGGTTTC
CCCCGCCGGATTTAATCTATGATATGGTTGGTACATACGGGTTTGGGTTA
GATGAAAATCTCCTAGACCCTAGCATGGCTAGTTTTGAATTCTTAGCACA
ATGAATGAAGCGCTCTTCGCAAGATGCCGACTTAGAGGCCCCACGGCCAC
ATGAACGTCGACCATCCCTCGTTCCTGACGGACGGCCTGCGCCACCCAAG
ATCTCCAAGGCCCGCGCTTGCGCGGAGTGTAAGCGTCATAAAATACGCTG
CGAGTTCAAGTCAGGCGAGGCGAGTTGCACAAAATGCATTCGCAGCGGGA
TCAAATGTGTAGTCAATGACTTCTCGCAGAAGTTTGTCGACGATGATGTA
ATGTGGAAATCACAAGCATCGGCTACCATACAACAGCTTCAAGCGGCAGT
CTCGCATCTTCTACATCAAGGAGGTCTTCCAGATCTATCGACCTTCATCT
CTGGTGACACCCAGAACGGCCCCAGTCCTGTGGCATCTCAGTCAGAGCGT
CGTTTCTCATCCGAGGCCTCACCCACCGATGTCAAACCCAGGGAGCCGGG
TATTGTTATGGATGTGACCCGAGAGCCTTCCCAGGAACCAGACCTACAAG
ACCGAGAGCTAGTACCAGCACCAATGCGCAGTCTATACGAGGTCACGAAG
CTCCGCAACTTGCGGAACAACCCCATCGAACAACCGAAGCTGACACTTCT
GGAGGAGGACTTCATCTCCAGAGGGCTGATTTCGCTTCATGAAGCCGAAG
AGCTGTTTGCCTACTTCAGCAGGACTATGAATCAGCTTCTCTGGGGAGGG
ATAGTCTTGGTGCATCGTGATCTCACGTCTGTCCGACGAGCATCGACGCT
ACTGTCAGCGGCTGTTCTAACCGTCGCTGCCCTCCATATACCGAATCGAA
CCGAGACACTCAACCGATGCTACAATGAGTATGTATCGCTTGTGTCGAGC
ATGTCTTTGACGAGAGCTCATACCCTCGATGATATTCGCGCTCTTTGTGT
CGGAGCTTTCTGGCTATCCGAATTAAGTTGGAAACTTTCTGGGCACGCTG
TTCGAATAGCCACAGAGTTGGGTCTTCACCAAAGCTATCATAAGCTAATG
CGTGGTCATAACGATCAGTATGAACGCGCTCAGCTCTGGTATCTTTTGTA
TGTGTGTGACCACCATTTTAGCATCGCCTATGGACGTCCACCAGTCATTC
ATGAGGATGCAGCGATCAAGAACTACGAATCTTTTCTCCAGTCACCAATG
GTAGTACCCGGGGATATCCGGCTACTAGCACAAGTGGCCTTGTTTATGAT
TCTGACCGAAGCATATCGGACATTTGGTACCGACACAGAACAAGCCCTCA
CAGAAGAAGACTTTGGGCAGTTACGGGTCTACAATGTAGCTATAGACCAA
TGGCGGCTACTGTGGCAACCCCGATCTGCCGATAGCCCCTATGTCCGAAC
GTATCCCTCGAAAGGGGTTGTCCTTCACTATCACTTCGCCAAATTTCAAC
TCAACTCCCTCTCTCTGCGGGCTTTGTCTCCGACAAATACCCCGGTGTTT
TCTATGGACCGCAAAGAGTCGGCTAATATTGCCATCTCATCCGCTATGGC
TTGTTTGAATATGGTGTTGGAGGAGCCGGACATTCGCGATGCCATTGTTG
GCGTTCCGATTTTTACCCACACGATGGTCACATTCTCCGCCGTGTTTCTC
TTGAAAGTCGCGATAAACTGGAACTCTGCATATCTTAGCCTCGACGGCCG
CCAGGTGCGACGCCTGGTAGAGCGGGTGATTGAGCTGCTGAACTGTGTTT
CTGCAGGGGAGAGACATCTGACGAGACATATTGCCCGAGGCCTTGGTAAG
ATGTTGGAGCGTTTCGACTCTTGGGACGCATGGCAAGCAGGAGGGCCACC
TGTTGTAGCATCCGGGGGTGTTGAGCGACCAGGAAGCGATGTTCCTGGGG
GTGCCAATGCCATGGCCCAGGGGTTTCCCCCGCCGGATTTAATCTATGAT
ATGGTTGGTACATACGGGTTTGGGTTAGATGAAAATCTCCTAGACCCTAG
CATGGCTAGTTTTGAATTCTTAGCACAATGAATGAAGCGCTCTTCGCAAG
ATGCCGACTTAGAGGCCCCACGGCCACATGAACGTCGACCATCCCTCGTT
CCTGACGGACGGCCTGCGCCACCCAAGATCTCCAAGGCCCGCGCTTGCGC
GGAGTGTAAGCGTCATAAAATACGCTGCGAGTTCAAGTCAGGCGAGGCGA
GTTGCACAAAATGCATTCGCAGCGGGATCAAATGTGTAGTCAATGACTTC
TCGCAGAAGTTTGTCGACGATGATGTAATGTGGAAATCACAAGCATCGGC
TACCATACAACAGCTTCAAGCGGCAGTCTCGCATCTTCTACATCAAGGAG
GTCTTCCAGATCTATCGACCTTCATCTCTGGTGACACCCAGAACGGCCCC
AGTCCTGTGGCATCTCAGTCAGAGCGTCGTTTCTCATCCGAGGCCTCACC
CACCGATGTCAAACCCAGGGAGCCGGGTATTGTTATGGATGTGACCCGAG
AGCCTTCCCAGGAACCAGACCTACAAGACCGAGAGCTAGTACCAGCACCA
ATGCGCAGTCTATACGAGGTCACGAAGCTCCGCAACTTGCGGAACAACCC
CATCGAACAACCGAAGCTGACACTTCTGGAGGAGGACTTCATCTCCAGAG
GGCTGATTTCGCTTCATGAAGCCGAAGAGCTGTTTGCCTACTTCAGCAGG
ACTATGAATCAGCTTCTCTGGGGAGGGATAGTCTTGGTGCATCGTGATCT
CACGTCTGTCCGACGAGCATCGACGCTACTGTCAGCGGCTGTTCTAACCG
TCGCTGCCCTCCATATACCGAATCGAACCGAGACACTCAACCGATGCTAC
AATGAGTATGTATCGCTTGTGTCGAGCATGTCTTTGACGAGAGCTCATAC
CCTCGATGATATTCGCGCTCTTTGTGTCGGAGCTTTCTGGCTATCCGAAT
TAAGTTGGAAACTTTCTGGGCACGCTGTTCGAATAGCCACAGAGTTGGGT
CTTCACCAAAGCTATCATAAGCTAATGCGTGGTCATAACGATCAGTATGA
ACGCGCTCAGCTCTGGTATCTTTTGTATGTGTGTGACCACCATTTTAGCA
TCGCCTATGGACGTCCACCAGTCATTCATGAGGATGCAGCGATCAAGAAC
TACGAATCTTTTCTCCAGTCACCAATGGTAGTACCCGGGGATATCCGGCT
ACTAGCACAAGTGGCCTTGTTTATGATTCTGACCGAAGCATATCGGACAT
TTGGTACCGACACAGAACAAGCCCTCACAGAAGAAGACTTTGGGCAGTTA
CGGGTCTACAATGTAGCTATAGACCAATGGCGGCTACTGTGGCAACCCCG
ATCTGCCGATAGCCCCTATGTCCGAACGTATCCCTCGAAAGGGGTTGTCC
TTCACTATCACTTCGCCAAATTTCAACTCAACTCCCTCTCTCTGCGGGCT
TTGTCTCCGACAAATACCCCGGTGTTTTCTATGGACCGCAAAGAGTCGGC
TAATATTGCCATCTCATCCGCTATGGCTTGTTTGAATATGGTGTTGGAGG
AGCCGGACATTCGCGATGCCATTGTTGGCGTTCCGATTTTTACCCACACG
ATGGTCACATTCTCCGCCGTGTTTCTCTTGAAAGTCGCGATAAACTGGAA
CTCTGCATATCTTAGCCTCGACGGCCGCCAGGTGCGACGCCTGGTAGAGC
GGGTGATTGAGCTGCTGAACTGTGTTTCTGCAGGGGAGAGACATCTGACG
AGACATATTGCCCGAGGCCTTGGTAAGATGTTGGAGCGTTTCGACTCTTG
GGACGCATGGCAAGCAGGAGGGCCACCTGTTGTAGCATCCGGGGGTGTTG
AGCGACCAGGAAGCGATGTTCCTGGGGGTGCCAATGCCATGGCCCAGGGG
TTTCCCCCGCCGGATTTAATCTATGATATGGTTGGTACATACGGGTTTGG
GTTAGATGAAAATCTCCTAGACCCTAGCATGGCTAGTTTTGAATTCTTAG
CACAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR007219 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:2165159..2167398 + |
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