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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:2191281..2192317+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001939-T1 ID=CBS51388_001939-T1|Name=CBS51388_001939-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1037bp|location=Sequence derived from alignment at An02:2191281..2192317+ (Aspergillus niger CBS 513.88)
ATGTTCGCTGTCTCTGGAATGGTACACATCTACCAGTGTTGGTATGTATT
CTCACACAAGTGCTATGCACCATGCAGTTCCTAACGATGATAACAGCCAA
TACAAGTCATGGAAAGTGACTGGACTCCTGCCCTGGTCTGCTCTTCTCTT
CACAGCTGGGTTCATAACGCGTACTATCGGCGCCTTTGGACAGTGGGGGA
ATGTGGGCATCTACATTGCAAGCACCGTTCTCTTGCTGGCTGCACCGTGA
GTGCTTGTTGATGCGAATTGACCATGAATGTCACTGACTAGCGTGCAGAC
CCGTCTATGAGGGCGCCAACTACTTCACTCTGGGCCGCATCCTTTACTAC
ATCCCATATCATTCGCCAATTCATCCTGGGCGCGTTTTCACCACTTTTGT
GGCGGTTGGTGTGGTGATTGAAGCTATCACCGGCAATGGGGCTGCGCTAG
TTGCCAATTCCGAGGCGACTGAAGGTAAAAGGAAGACGGGAGAGGGATTG
CTCAAAGCAGCTTTGATCTTGCAACTTGTGTTGATGGCAGCATTTGTGGC
CTTGGCTGCCAGATTCCACTACAACTGTTCTCGTGGCGGCGTCTTGAACC
ACAAGATCAAGCGGGCCTTGTACGTGCTGTATTGCAGTTGTACCCTCATC
ACTGTGCGCACGATCTATCGAACAGTGGAATATTTTAGCGCTGCGAGCCT
CAATGTCTATAGTGGCAACCAGATCAGCCCGATCCTCAAGGATGAGTGGT
TTTTCTGGGTTTTTGAGGCTGGTGTCATGTACCTCAACACCATCTTGCTG
AATGTCTGCCATCCGATGCAATGGCTTCCACGCTCCAACAAGATATATCT
CGCCACGGATGGCGTTACCGAAATCGAAGGGCCTGGTTACGACGATCACC
GACCAGTCATCCTGACCCTTATTGATCCCTTCGACATAGTTGGCCTGATC
AAGAACAAAGGTAGACAAGAGAAGTATTGGGAAGCCGGGCCAGTCGGCAA
ACTTAACAAGGATACGCCTGGATCGTTTGCCGTGTAG back to topCoding sequence (CDS) from alignment at An02:2191281..2192317+ >CBS51388_001939-T1 ID=CBS51388_001939-T1|Name=CBS51388_001939-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2790bp|location=Sequence derived from alignment at An02:2191281..2192317+ (Aspergillus niger CBS 513.88)
ATGTTCGCTGTCTCTGGAATGGTACACATCTACCAGTGTTGCCAATACAA
GTCATGGAAAGTGACTGGACTCCTGCCCTGGTCTGCTCTTCTCTTCACAG
CTGGGTTCATAACGCGTACTATCGGCGCCTTTGGACAGTGGGGGAATGTG
GGCATCTACATTGCAAGCACCGTTCTCTTGCTGGCTGCACCACCCGTCTA
TGAGGGCGCCAACTACTTCACTCTGGGCCGCATCCTTTACTACATCCCAT
ATCATTCGCCAATTCATCCTGGGCGCGTTTTCACCACTTTTGTGGCGGTT
GGTGTGGTGATTGAAGCTATCACCGGCAATGGGGCTGCGCTAGTTGCCAA
TTCCGAGGCGACTGAAGGTAAAAGGAAGACGGGAGAGGGATTGCTCAAAG
CAGCTTTGATCTTGCAACTTGTGTTGATGGCAGCATTTGTGGCCTTGGCT
GCCAGATTCCACTACAACTGTTCTCGTGGCGGCGTCTTGAACCACAAGAT
CAAGCGGGCCTTGTACGTGCTGTATTGCAGTTGTACCCTCATCACTGTGC
GCACGATCTATCGAACAGTGGAATATTTTAGCGCTGCGAGCCTCAATGTC
TATAGTGGCAACCAGATCAGCCCGATCCTCAAGGATGAGTGGTTTTTCTG
GGTTTTTGAGGCTGGTGTCATGTACCTCAACACCATCTTGCTGAATGTCT
GCCATCCGATGCAATGGCTTCCACGCTCCAACAAGATATATCTCGCCACG
GATGGCGTTACCGAAATCGAAGGGCCTGGTTACGACGATCACCGACCAGT
CATCCTGACCCTTATTGATCCCTTCGACATAGTTGGCCTGATCAAGAACA
AAGGTAGACAAGAGAAGTATTGGGAAGCCGGGCCAGTCGGCAAACTTAAC
AAGGATACGCCTGGATCGTTTGCCGTGTAGATGTTCGCTGTCTCTGGAAT
GGTACACATCTACCAGTGTTGCCAATACAAGTCATGGAAAGTGACTGGAC
TCCTGCCCTGGTCTGCTCTTCTCTTCACAGCTGGGTTCATAACGCGTACT
ATCGGCGCCTTTGGACAGTGGGGGAATGTGGGCATCTACATTGCAAGCAC
CGTTCTCTTGCTGGCTGCACCACCCGTCTATGAGGGCGCCAACTACTTCA
CTCTGGGCCGCATCCTTTACTACATCCCATATCATTCGCCAATTCATCCT
GGGCGCGTTTTCACCACTTTTGTGGCGGTTGGTGTGGTGATTGAAGCTAT
CACCGGCAATGGGGCTGCGCTAGTTGCCAATTCCGAGGCGACTGAAGGTA
AAAGGAAGACGGGAGAGGGATTGCTCAAAGCAGCTTTGATCTTGCAACTT
GTGTTGATGGCAGCATTTGTGGCCTTGGCTGCCAGATTCCACTACAACTG
TTCTCGTGGCGGCGTCTTGAACCACAAGATCAAGCGGGCCTTGTACGTGC
TGTATTGCAGTTGTACCCTCATCACTGTGCGCACGATCTATCGAACAGTG
GAATATTTTAGCGCTGCGAGCCTCAATGTCTATAGTGGCAACCAGATCAG
CCCGATCCTCAAGGATGAGTGGTTTTTCTGGGTTTTTGAGGCTGGTGTCA
TGTACCTCAACACCATCTTGCTGAATGTCTGCCATCCGATGCAATGGCTT
CCACGCTCCAACAAGATATATCTCGCCACGGATGGCGTTACCGAAATCGA
AGGGCCTGGTTACGACGATCACCGACCAGTCATCCTGACCCTTATTGATC
CCTTCGACATAGTTGGCCTGATCAAGAACAAAGGTAGACAAGAGAAGTAT
TGGGAAGCCGGGCCAGTCGGCAAACTTAACAAGGATACGCCTGGATCGTT
TGCCGTGTAGATGTTCGCTGTCTCTGGAATGGTACACATCTACCAGTGTT
GCCAATACAAGTCATGGAAAGTGACTGGACTCCTGCCCTGGTCTGCTCTT
CTCTTCACAGCTGGGTTCATAACGCGTACTATCGGCGCCTTTGGACAGTG
GGGGAATGTGGGCATCTACATTGCAAGCACCGTTCTCTTGCTGGCTGCAC
CACCCGTCTATGAGGGCGCCAACTACTTCACTCTGGGCCGCATCCTTTAC
TACATCCCATATCATTCGCCAATTCATCCTGGGCGCGTTTTCACCACTTT
TGTGGCGGTTGGTGTGGTGATTGAAGCTATCACCGGCAATGGGGCTGCGC
TAGTTGCCAATTCCGAGGCGACTGAAGGTAAAAGGAAGACGGGAGAGGGA
TTGCTCAAAGCAGCTTTGATCTTGCAACTTGTGTTGATGGCAGCATTTGT
GGCCTTGGCTGCCAGATTCCACTACAACTGTTCTCGTGGCGGCGTCTTGA
ACCACAAGATCAAGCGGGCCTTGTACGTGCTGTATTGCAGTTGTACCCTC
ATCACTGTGCGCACGATCTATCGAACAGTGGAATATTTTAGCGCTGCGAG
CCTCAATGTCTATAGTGGCAACCAGATCAGCCCGATCCTCAAGGATGAGT
GGTTTTTCTGGGTTTTTGAGGCTGGTGTCATGTACCTCAACACCATCTTG
CTGAATGTCTGCCATCCGATGCAATGGCTTCCACGCTCCAACAAGATATA
TCTCGCCACGGATGGCGTTACCGAAATCGAAGGGCCTGGTTACGACGATC
ACCGACCAGTCATCCTGACCCTTATTGATCCCTTCGACATAGTTGGCCTG
ATCAAGAACAAAGGTAGACAAGAGAAGTATTGGGAAGCCGGGCCAGTCGG
CAAACTTAACAAGGATACGCCTGGATCGTTTGCCGTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007568 |
| DBxref | PFAM:PF04479 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:2191281..2192317 + |
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