You are here

CBS51388_001960-T1, CBS51388_001960-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001960-T1
Unique NameCBS51388_001960-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:2255618..2256600-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001960-T1 ID=CBS51388_001960-T1|Name=CBS51388_001960-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=983bp|location=Sequence derived from alignment at An02:2255618..2256600- (Aspergillus niger CBS 513.88)
ATGTCCACCACCAGCACTTATTCCCCGTTTCGCATCTCTCCCCGCGATCG CGCCAATTTGGATCGCAATGAGGCTTTCAGGCTTGTGAGGGAGCATCTGA GGCGCCAGGAACTGGGCATGAAAGCTCCTAGGTACGTGTTTTCTTGCCCA TCAAAAGAACCCAGGGTCAATTATCAGTAGCTAACCAGATCGGCTATAGC TTTTGTGCCGAGCATCGCCATGATACCCCCAGTCAAGAACAAGAAACCTT CCGGCTCCATCGCGATATCATCCACACCATCCTTCTCCCTCTCTTTCTGC TCCACCACCAAGCCTCGCGTATCGCAACCAATGTGCTGCCACGCTACAAA GGCGCAGAATGCGAACGGGCGTTCCGTGGTGAGGCGCGTGGTGCTTATGC TTGGCTGCATTCCATTTTGAGCGAAGAGCATGATTGGTATTTGACCGAAC GCTGTCCCGCCTGTATCGTTCTGCACGTTATGAACTCGGAGCCGACCATT CGATTTGTCGCCGTGGCGTGTCTCCTGTCAGACCACTTGCAGGGTCTGGA CCTCCCGAGCGCCAAGAGACGGCTGCCTAACTTCGACTTCTGGTACGAAT CACTCGAGAATGCCGTTCGCCAGGATACGTTTTGGGGCGATGGCTTCTGG CCGGACATTGAATATCGCGCCTGTGCCTTGACCGATGGCGTGAAGCAGCT GGTGCTGCAGTGCTTGGAGCTGCAGGCTGCTCTGGACCGACATGACCTGC AGCCTGAGTCGTCGTACCGACCGACTCAGCGCTCTCGGAATGACTCGTCA CGGCCGTCCGTTACGGTGAAGCAGTCCAGCTGCACGCAGCTCCCTGTCAT CGACGAAGAAGACCAGAAGCTCTTTGCCAAGGCCGGCGCCAATCGCGGCA TGCATCCCTGCCGCAATGAGCGGCCGCAGAGATTTCACGCTCGCCGCCAT GGTGACCCTCGCAGAAGATCGGTGACATCTTGA
back to top

Coding sequence (CDS) from alignment at An02:2255618..2256600-

>CBS51388_001960-T1 ID=CBS51388_001960-T1|Name=CBS51388_001960-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1830bp|location=Sequence derived from alignment at An02:2255618..2256600- (Aspergillus niger CBS 513.88)
CTTTTGTGCCGAGCATCGCCATGATACCCCCAGTCAAGAACAAGAAACCT
TCCGGCTCCATCGCGATATCATCCACACCATCCTTCTCCCTCTCTTTCTG
CTCCACCACCAAGCCTCGCGTATCGCAACCAATGTGCTGCCACGCTACAA
AGGCGCAGAATGCGAACGGGCGTTCCGTGGTGAGGCGCGTGGTGCTTATG
CTTGGCTGCATTCCATTTTGAGCGAAGAGCATGATTGGTATTTGACCGAA
CGCTGTCCCGCCTGTATCGTTCTGCACGTTATGAACTCGGAGCCGACCAT
TCGATTTGTCGCCGTGGCGTGTCTCCTGTCAGACCACTTGCAGGGTCTGG
ACCTCCCGAGCGCCAAGAGACGGCTGCCTAACTTCGACTTCTGGTACGAA
TCACTCGAGAATGCCGTTCGCCAGGATACGTTTTGGGGCGATGGCTTCTG
GCCGGACATTGAATATCGCGCCTGTGCCTTGACCGATGGCGTGAAGCAGC
TGGTGCTGCAGTGCTTGGAGCTGCAGGCTGCTCTGGACCGACATGACCTG
CAGCCTGAGTCGTCGTACCGACCGACTCAGCGCTCTCGGAATGACTCGTC
ACGGCCGTCCGTTACGGTGAAGCAGTCCAGCTGCACGCAGCTCCCTGTCA
TCGACGAAGAAGACCAGAAGCTCTTTGCCAAGGCCGGCGCCAATCGCGGC
ATGCATCCCTGCCGCAATGAGCGGCCGCAGAGATTTCACGCTCGCCGCCA
TGGTGACCCTCGCAGAAGATCGGTGACATCTTGAATGTCCACCACCAGCA
CTTATTCCCCGTTTCGCATCTCTCCCCGCGATCGCGCCAATTTGGATCGC
AATGAGGCTTTCAGGCTTGTGAGGGAGCATCTGAGGCGCCAGGAACTGGG
CATGAAAGCTCCTAGCTTTTGTGCCGAGCATCGCCATGATACCCCCAGTC
AAGAACAAGAAACCTTCCGGCTCCATCGCGATATCATCCACACCATCCTT
CTCCCTCTCTTTCTGCTCCACCACCAAGCCTCGCGTATCGCAACCAATGT
GCTGCCACGCTACAAAGGCGCAGAATGCGAACGGGCGTTCCGTGGTGAGG
CGCGTGGTGCTTATGCTTGGCTGCATTCCATTTTGAGCGAAGAGCATGAT
TGGTATTTGACCGAACGCTGTCCCGCCTGTATCGTTCTGCACGTTATGAA
CTCGGAGCCGACCATTCGATTTGTCGCCGTGGCGTGTCTCCTGTCAGACC
ACTTGCAGGGTCTGGACCTCCCGAGCGCCAAGAGACGGCTGCCTAACTTC
GACTTCTGGTACGAATCACTCGAGAATGCCGTTCGCCAGGATACGTTTTG
GGGCGATGGCTTCTGGCCGGACATTGAATATCGCGCCTGTGCCTTGACCG
ATGGCGTGAAGCAGCTGGTGCTGCAGTGCTTGGAGCTGCAGGCTGCTCTG
GACCGACATGACCTGCAGCCTGAGTCGTCGTACCGACCGACTCAGCGCTC
TCGGAATGACTCGTCACGGCCGTCCGTTACGGTGAAGCAGTCCAGCTGCA
CGCAGCTCCCTGTCATCGACGAAGAAGACCAGAAGCTCTTTGCCAAGGCC
GGCGCCAATCGCGGCATGCATCCCTGCCGCAATGAGCGGCCGCAGAGATT
TCACGCTCGCCGCCATGGTGACCCTCGCAGAAGATCGGTGACATCTTGAA
TGTCCACCACCAGCACTTATTCCCCGTTTCGCATCTCTCCCCGCGATCGC
GCCAATTTGGATCGCAATGAGGCTTTCAGGCTTGTGAGGGAGCATCTGAG
GCGCCAGGAACTGGGCATGAAAGCTCCTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_001960CBS51388_001960Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001960-T1CBS51388_001960-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001960-T1.cdsCBS51388_001960-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001960-T1.exon2CBS51388_001960-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001960-T1.exon1CBS51388_001960-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:2255618..2256600 -