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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:2282647..2285404+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001967-T1 ID=CBS51388_001967-T1|Name=CBS51388_001967-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2758bp|location=Sequence derived from alignment at An02:2282647..2285404+ (Aspergillus niger CBS 513.88)
ATGGGGATTCCGGGGTAAGTCAGCCAGTTTTGTAGGTGCTGTTTGTGGAA
CTTTGTCTTGAGGGAGAAATATATTATCCCCTTCCAGTGCGCAAACAGCA
CTTGTTCAATTAGTAGTTCAACAGCTAACCCACTAACCACAAAGGCTTAT
TCATGCCATTGGCGCTGGTGAACGTATCTCCTTGTCTAGATTGGCCATAA
CTCATTTGGAGCGCACAGCAAGGCCTATTCGTATTGCTGTGGACATCTCG
ATATGGTTGTTCCAAGTGCAAGCTGGCCGGGGTGGTCGAAATCCGGAGCT
ACGGACACTATTCTACAGGCTATTGAAGATTCTGGCGCTTCCAATCCATC
CTCTTTTTGTATATGATGGCAAGAACAAGCCGCCTTTCAAGAGAGGCAAA
GCCGTGTCAAGTCGCAGTTACGGGAATGCACCAATCATTCGGCTCTCCAA
GATCCTAGTTGATCTGTTCAAATTTCCGCGCCATGAGGCGCCAGGAGAAG
CAGAAGCAGAGTGTGCAAGGCTGCAAAGAGCAGGAGTTGTTGATGCAGTT
ATGACCAATGACGTTGACGCTCTAATGTTTGGCTCAACATTCACCGTCAT
GGGGTTTTCGAAGGAAAGCGGTAGTAGTACTGGGGCTGCAACACATGTTA
CCTGCTACCGCATGAACACCGCTGGTGATCCTTCAAGTGTGAAGCTTAAT
CGTGCAGGCATGATCTTGTTTGCCATGTTAAGTGGCGGTGATTACTTACC
GTCGGGAGTCCCTAAATGCGGTAGCAAGCTCGCTGGCGAGATTGCCAAAG
CTGGCTTTGGCGCAGATCTTCTGGAAATCCTGGAGTCAGACGGTGCCGAG
CTCGATACGAGACTAAGTGATTGGAGAGAACGACTCCAGTATGAGTTGGA
AGAAAACGAAAGTGGTTACTTCCAGACCAAGCACAAGGTTGTCCGAATTC
CGGATACTTTTCCCGACCGGACAATTTTGTCATATTATGCTAATCCTGTG
GTTTCATCGACCGGCGATATCAAAGCCCTTCAACAATACCTGTCAAATGC
CTGGGACAAGGACATAGACGTTGTCGAGCTGAGGAGATTTGCTGCCGACG
CCTTTGAGTGGAATTACCGCTCTGGGGCTAGGAAAGTGACCAGATTACTT
TCTGAGCCGCTTCTGTCTTACCGACTACGCCTTGGAAGACAAGCATCGGC
CTTTCCCGCGAACCGCCCTAGGTTATCAAACTGCGATGTGCCAATGCTGC
AGAAAATCTATAAGAGCAGGTCCAGCTATAGCACCGATGGCTTAACGGAG
TATCAACTGGATATGGTTCCCGTCGACGTTGTTGGCTTGGATATTCTTGC
TGATGAGCCAAACCCTCCAATCCCCTCTCAAGAGTCGACAGTCTCAGGTG
ACGAGGAAGAGGAATTGGAGGATAACGTGGTATCGGTGCCTCAATCTCCG
GTCAAAAAACGTGTCATAAAGCGCTATGACCCTTATGTCTCAGAGAAGGT
GTGGGTATTCGAAGCCCTGGCCACTATAGGACTCCCGGAAGTCGTGGAGA
ATTGGAAACGAGAGCAAGCTGAGAAGTCGGCACCGAAGAAGACAACGACA
CGAAAGACAGGACCTCGGAAAAAGGGGCCTATAGACCCGAATATGAAGCG
AGGCAGCATTTTGAAATATGGAACCCTCACGAAGGAGCGAACTGAAATAT
CCCGCCACAAAAGCGCGCAGCTCTTAGAGGCCGCAGTCTCTGCTAAAGCA
ACTGCTGTACCCAGTCTGTCGAGTTCCCGTCAGTCTCTAGATTCTCCTAA
TCCTTCAAGGAAGCCACCAGCGTCTGACATATCTATACAGCAGCAGCCAT
TGACTGACCTAAGTGACGATTCGCCGAGCCTTCATGACCTAATCGACCAA
TTTACCTCATTGAGTCATGGTTCGCTCAACGCAGATGCCAAACAGCAGCA
GCCCAGAACCACCCGAGCACGCGGCACAAGTGGACGAAAGGTTGCTTCTG
CAGATGTCACTGCATCGGAGACAAAGAAAGTTTCTGATGCAGAGAGTCTC
CCCACTCATTCGTCGAGTAAAGGGAATGCTCGAACAAGCTCGAAGCGCCG
TACGCAGAAGCAAGATGTGACAGACGACAAGAAGCATGCACTTCGTTCGA
CAACGCCTAACCGCGCAGACCGCCAGGATGCATCAAAACTCCAGCGCAAC
AGGGACAAACTCAAGTCTTCTTACGAGGTTGAGGAACTAGAAGAAGCCGT
ATCTTCCATAACATTGGATGACGCGCAAATTCGCAAAACGGGCACAGAAC
CCATATGTCTAAACGATGCTGGGCCCGTGCCTCGAAGAAGCTCGCGCCAG
GAGAAGATGTGTAACAGCGAGTCTGGCCTTTCTAGGGCTGCTGAATGTAC
GGCCGGTTCTTCGCCTCCTGCCAAGAAGAACAAGCCTGTTTTAGACATAG
AAGAAAACAATGTTGCACATCCAAGAACGCCTCGAGACGGAGAGAAACCC
TCGGGACGAACACAACCATCGTCCTCAGTGAGCGAGCCCAAAGTGCTGAA
GCCTCGGAATGGCAAAAATTCTGAGGAATCGAACGACTGTTCATCGACAG
TCTCCCACATTGAATCTGTCATTGTACACGATGGGTTCTGGACGACAGAT
ACTAGCTCGAAATCGAAATCGACAGAGGCTACAAAGGTGACTGACACTGG
GGGCAGTCGCAGTAAGAAAAAGCGAATCGCCCGTGTGAGCATCTTGGACT
TGACCTAA back to topCoding sequence (CDS) from alignment at An02:2282647..2285404+ >CBS51388_001967-T1 ID=CBS51388_001967-T1|Name=CBS51388_001967-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5256bp|location=Sequence derived from alignment at An02:2282647..2285404+ (Aspergillus niger CBS 513.88)
ATGGGGATTCCGGGGCTTATTCATGCCATTGGCGCTGGTGAACGTATCTC
CTTGTCTAGATTGGCCATAACTCATTTGGAGCGCACAGCAAGGCCTATTC
GTATTGCTGTGGACATCTCGATATGGTTGTTCCAAGTGCAAGCTGGCCGG
GGTGGTCGAAATCCGGAGCTACGGACACTATTCTACAGGCTATTGAAGAT
TCTGGCGCTTCCAATCCATCCTCTTTTTGTATATGATGGCAAGAACAAGC
CGCCTTTCAAGAGAGGCAAAGCCGTGTCAAGTCGCAGTTACGGGAATGCA
CCAATCATTCGGCTCTCCAAGATCCTAGTTGATCTGTTCAAATTTCCGCG
CCATGAGGCGCCAGGAGAAGCAGAAGCAGAGTGTGCAAGGCTGCAAAGAG
CAGGAGTTGTTGATGCAGTTATGACCAATGACGTTGACGCTCTAATGTTT
GGCTCAACATTCACCGTCATGGGGTTTTCGAAGGAAAGCGGTAGTAGTAC
TGGGGCTGCAACACATGTTACCTGCTACCGCATGAACACCGCTGGTGATC
CTTCAAGTGTGAAGCTTAATCGTGCAGGCATGATCTTGTTTGCCATGTTA
AGTGGCGGTGATTACTTACCGTCGGGAGTCCCTAAATGCGGTAGCAAGCT
CGCTGGCGAGATTGCCAAAGCTGGCTTTGGCGCAGATCTTCTGGAAATCC
TGGAGTCAGACGGTGCCGAGCTCGATACGAGACTAAGTGATTGGAGAGAA
CGACTCCAGTATGAGTTGGAAGAAAACGAAAGTGGTTACTTCCAGACCAA
GCACAAGGTTGTCCGAATTCCGGATACTTTTCCCGACCGGACAATTTTGT
CATATTATGCTAATCCTGTGGTTTCATCGACCGGCGATATCAAAGCCCTT
CAACAATACCTGTCAAATGCCTGGGACAAGGACATAGACGTTGTCGAGCT
GAGGAGATTTGCTGCCGACGCCTTTGAGTGGAATTACCGCTCTGGGGCTA
GGAAAGTGACCAGATTACTTTCTGAGCCGCTTCTGTCTTACCGACTACGC
CTTGGAAGACAAGCATCGGCCTTTCCCGCGAACCGCCCTAGGTTATCAAA
CTGCGATGTGCCAATGCTGCAGAAAATCTATAAGAGCAGGTCCAGCTATA
GCACCGATGGCTTAACGGAGTATCAACTGGATATGGTTCCCGTCGACGTT
GTTGGCTTGGATATTCTTGCTGATGAGCCAAACCCTCCAATCCCCTCTCA
AGAGTCGACAGTCTCAGGTGACGAGGAAGAGGAATTGGAGGATAACGTGG
TATCGGTGCCTCAATCTCCGGTCAAAAAACGTGTCATAAAGCGCTATGAC
CCTTATGTCTCAGAGAAGGTGTGGGTATTCGAAGCCCTGGCCACTATAGG
ACTCCCGGAAGTCGTGGAGAATTGGAAACGAGAGCAAGCTGAGAAGTCGG
CACCGAAGAAGACAACGACACGAAAGACAGGACCTCGGAAAAAGGGGCCT
ATAGACCCGAATATGAAGCGAGGCAGCATTTTGAAATATGGAACCCTCAC
GAAGGAGCGAACTGAAATATCCCGCCACAAAAGCGCGCAGCTCTTAGAGG
CCGCAGTCTCTGCTAAAGCAACTGCTGTACCCAGTCTGTCGAGTTCCCGT
CAGTCTCTAGATTCTCCTAATCCTTCAAGGAAGCCACCAGCGTCTGACAT
ATCTATACAGCAGCAGCCATTGACTGACCTAAGTGACGATTCGCCGAGCC
TTCATGACCTAATCGACCAATTTACCTCATTGAGTCATGGTTCGCTCAAC
GCAGATGCCAAACAGCAGCAGCCCAGAACCACCCGAGCACGCGGCACAAG
TGGACGAAAGGTTGCTTCTGCAGATGTCACTGCATCGGAGACAAAGAAAG
TTTCTGATGCAGAGAGTCTCCCCACTCATTCGTCGAGTAAAGGGAATGCT
CGAACAAGCTCGAAGCGCCGTACGCAGAAGCAAGATGTGACAGACGACAA
GAAGCATGCACTTCGTTCGACAACGCCTAACCGCGCAGACCGCCAGGATG
CATCAAAACTCCAGCGCAACAGGGACAAACTCAAGTCTTCTTACGAGGTT
GAGGAACTAGAAGAAGCCGTATCTTCCATAACATTGGATGACGCGCAAAT
TCGCAAAACGGGCACAGAACCCATATGTCTAAACGATGCTGGGCCCGTGC
CTCGAAGAAGCTCGCGCCAGGAGAAGATGTGTAACAGCGAGTCTGGCCTT
TCTAGGGCTGCTGAATGTACGGCCGGTTCTTCGCCTCCTGCCAAGAAGAA
CAAGCCTGTTTTAGACATAGAAGAAAACAATGTTGCACATCCAAGAACGC
CTCGAGACGGAGAGAAACCCTCGGGACGAACACAACCATCGTCCTCAGTG
AGCGAGCCCAAAGTGCTGAAGCCTCGGAATGGCAAAAATTCTGAGGAATC
GAACGACTGTTCATCGACAGTCTCCCACATTGAATCTGTCATTGTACACG
ATGGGTTCTGGACGACAGATACTAGCTCGAAATCGAAATCGACAGAGGCT
ACAAAGGTGACTGACACTGGGGGCAGTCGCAGTAAGAAAAAGCGAATCGC
CCGTGTGAGCATCTTGGACTTGACCTAAATGGGGATTCCGGGGCTTATTC
ATGCCATTGGCGCTGGTGAACGTATCTCCTTGTCTAGATTGGCCATAACT
CATTTGGAGCGCACAGCAAGGCCTATTCGTATTGCTGTGGACATCTCGAT
ATGGTTGTTCCAAGTGCAAGCTGGCCGGGGTGGTCGAAATCCGGAGCTAC
GGACACTATTCTACAGGCTATTGAAGATTCTGGCGCTTCCAATCCATCCT
CTTTTTGTATATGATGGCAAGAACAAGCCGCCTTTCAAGAGAGGCAAAGC
CGTGTCAAGTCGCAGTTACGGGAATGCACCAATCATTCGGCTCTCCAAGA
TCCTAGTTGATCTGTTCAAATTTCCGCGCCATGAGGCGCCAGGAGAAGCA
GAAGCAGAGTGTGCAAGGCTGCAAAGAGCAGGAGTTGTTGATGCAGTTAT
GACCAATGACGTTGACGCTCTAATGTTTGGCTCAACATTCACCGTCATGG
GGTTTTCGAAGGAAAGCGGTAGTAGTACTGGGGCTGCAACACATGTTACC
TGCTACCGCATGAACACCGCTGGTGATCCTTCAAGTGTGAAGCTTAATCG
TGCAGGCATGATCTTGTTTGCCATGTTAAGTGGCGGTGATTACTTACCGT
CGGGAGTCCCTAAATGCGGTAGCAAGCTCGCTGGCGAGATTGCCAAAGCT
GGCTTTGGCGCAGATCTTCTGGAAATCCTGGAGTCAGACGGTGCCGAGCT
CGATACGAGACTAAGTGATTGGAGAGAACGACTCCAGTATGAGTTGGAAG
AAAACGAAAGTGGTTACTTCCAGACCAAGCACAAGGTTGTCCGAATTCCG
GATACTTTTCCCGACCGGACAATTTTGTCATATTATGCTAATCCTGTGGT
TTCATCGACCGGCGATATCAAAGCCCTTCAACAATACCTGTCAAATGCCT
GGGACAAGGACATAGACGTTGTCGAGCTGAGGAGATTTGCTGCCGACGCC
TTTGAGTGGAATTACCGCTCTGGGGCTAGGAAAGTGACCAGATTACTTTC
TGAGCCGCTTCTGTCTTACCGACTACGCCTTGGAAGACAAGCATCGGCCT
TTCCCGCGAACCGCCCTAGGTTATCAAACTGCGATGTGCCAATGCTGCAG
AAAATCTATAAGAGCAGGTCCAGCTATAGCACCGATGGCTTAACGGAGTA
TCAACTGGATATGGTTCCCGTCGACGTTGTTGGCTTGGATATTCTTGCTG
ATGAGCCAAACCCTCCAATCCCCTCTCAAGAGTCGACAGTCTCAGGTGAC
GAGGAAGAGGAATTGGAGGATAACGTGGTATCGGTGCCTCAATCTCCGGT
CAAAAAACGTGTCATAAAGCGCTATGACCCTTATGTCTCAGAGAAGGTGT
GGGTATTCGAAGCCCTGGCCACTATAGGACTCCCGGAAGTCGTGGAGAAT
TGGAAACGAGAGCAAGCTGAGAAGTCGGCACCGAAGAAGACAACGACACG
AAAGACAGGACCTCGGAAAAAGGGGCCTATAGACCCGAATATGAAGCGAG
GCAGCATTTTGAAATATGGAACCCTCACGAAGGAGCGAACTGAAATATCC
CGCCACAAAAGCGCGCAGCTCTTAGAGGCCGCAGTCTCTGCTAAAGCAAC
TGCTGTACCCAGTCTGTCGAGTTCCCGTCAGTCTCTAGATTCTCCTAATC
CTTCAAGGAAGCCACCAGCGTCTGACATATCTATACAGCAGCAGCCATTG
ACTGACCTAAGTGACGATTCGCCGAGCCTTCATGACCTAATCGACCAATT
TACCTCATTGAGTCATGGTTCGCTCAACGCAGATGCCAAACAGCAGCAGC
CCAGAACCACCCGAGCACGCGGCACAAGTGGACGAAAGGTTGCTTCTGCA
GATGTCACTGCATCGGAGACAAAGAAAGTTTCTGATGCAGAGAGTCTCCC
CACTCATTCGTCGAGTAAAGGGAATGCTCGAACAAGCTCGAAGCGCCGTA
CGCAGAAGCAAGATGTGACAGACGACAAGAAGCATGCACTTCGTTCGACA
ACGCCTAACCGCGCAGACCGCCAGGATGCATCAAAACTCCAGCGCAACAG
GGACAAACTCAAGTCTTCTTACGAGGTTGAGGAACTAGAAGAAGCCGTAT
CTTCCATAACATTGGATGACGCGCAAATTCGCAAAACGGGCACAGAACCC
ATATGTCTAAACGATGCTGGGCCCGTGCCTCGAAGAAGCTCGCGCCAGGA
GAAGATGTGTAACAGCGAGTCTGGCCTTTCTAGGGCTGCTGAATGTACGG
CCGGTTCTTCGCCTCCTGCCAAGAAGAACAAGCCTGTTTTAGACATAGAA
GAAAACAATGTTGCACATCCAAGAACGCCTCGAGACGGAGAGAAACCCTC
GGGACGAACACAACCATCGTCCTCAGTGAGCGAGCCCAAAGTGCTGAAGC
CTCGGAATGGCAAAAATTCTGAGGAATCGAACGACTGTTCATCGACAGTC
TCCCACATTGAATCTGTCATTGTACACGATGGGTTCTGGACGACAGATAC
TAGCTCGAAATCGAAATCGACAGAGGCTACAAAGGTGACTGACACTGGGG
GCAGTCGCAGTAAGAAAAAGCGAATCGCCCGTGTGAGCATCTTGGACTTG
ACCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008821 | crossover junction endodeoxyribonuclease activity |
| GO:0004518 | nuclease activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029060 |
| DBxref | InterPro:IPR036279 |
| DBxref | InterPro:IPR037316 |
| DBxref | InterPro:IPR041177 |
| DBxref | InterPro:IPR006085 |
| DBxref | InterPro:IPR006086 |
| DBxref | InterPro:IPR006084 |
| DBxref | PFAM:PF00752 |
| DBxref | PFAM:PF00867 |
| DBxref | PFAM:PF18380 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:2282647..2285404 + |
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