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CBS51388_001971-T1, CBS51388_001971-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001971-T1
Unique NameCBS51388_001971-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:2295068..2296037-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001971-T1 ID=CBS51388_001971-T1|Name=CBS51388_001971-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=970bp|location=Sequence derived from alignment at An02:2295068..2296037- (Aspergillus niger CBS 513.88)
ATGCCTCCCCGCATTCTACTCCAGCCTTCATTGAGGGCCCTCACAGGTAA
ATACTATCTTGTTGCTCCTCCCTCCTGATTCGCGCCTAGTAACTCACCGG
GTTGTCGTTATCCCAGGCCCTTCCTCCGTGCAGCTCCCATTTGCAGCATT
GTCGCTCAACCCGGCGAAAACCTCCGTAAGAGCTGGGTCTACAGAGTCTC
GAGAGCGCAGACGCCATGACCCTTTCCTTATGGCGCAATCTCGCCAACGC
AAGGCCGCCAACATCTCTCGCCAGAAAGCCCTCACCAAAGAGCGCGAAGG
GTCTGTCGGAGACCCCGTCCAAAGCGAACCTACACCCTTTATCCAGGAAC
TCAGAAAGACCCAAGCGACTTTGCAGGACACAGACCTCAATTACTTCGTC
ACACCGGATGGTCTCAATGAGGCGATGGAGTACTCGAAGAACCTGACATC
ACCGATTCGGAACCCGGACCGCGACACTGCTGATCCTCAGCTCGAGAAAG
AAGCGGCTGAGAAGCATCTTCAAGAACATCGGAATGCACAGGAAGCCATC
CGTCGTATTGTCAGTGTCGCCAACGGAAACACAAAGGACCACATGCGGCT
TCACATCCAGAAATGCATTGAGACCTTTGGCCGGCATAAGACCGACAGCG
TATTGCCGCCCAAGCCATCTGGCGTATCGCATGACTCTGCGACTGTTCAT
CTTGAGAAAACTCCCCGCGTTGGTCCGGATACTGGCTCTCCGGAAGTACA
GGTTGCCATTCTCACTGCAAAGATCATGAACTTGTCTAGACATCTCCAGA
CGACGAAAAAGGACCGACACAACAAGCGCAACTTGCGTCTACTTGTTCAC
AAGAGACAGAAGTTGCTTCGTTACTTGCGGAGGAAGGAAAGAGGTGGTCC
CCGGTGGCAGAATCTGATGGAGAAGCTGGGTCTCTCGGAAGCTGCTTGGA
AGGGTGAGATCTCCATGTAA
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Coding sequence (CDS) from alignment at An02:2295068..2296037-

>CBS51388_001971-T1 ID=CBS51388_001971-T1|Name=CBS51388_001971-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1800bp|location=Sequence derived from alignment at An02:2295068..2296037- (Aspergillus niger CBS 513.88)
GCCCTTCCTCCGTGCAGCTCCCATTTGCAGCATTGTCGCTCAACCCGGCG
AAAACCTCCGTAAGAGCTGGGTCTACAGAGTCTCGAGAGCGCAGACGCCA
TGACCCTTTCCTTATGGCGCAATCTCGCCAACGCAAGGCCGCCAACATCT
CTCGCCAGAAAGCCCTCACCAAAGAGCGCGAAGGGTCTGTCGGAGACCCC
GTCCAAAGCGAACCTACACCCTTTATCCAGGAACTCAGAAAGACCCAAGC
GACTTTGCAGGACACAGACCTCAATTACTTCGTCACACCGGATGGTCTCA
ATGAGGCGATGGAGTACTCGAAGAACCTGACATCACCGATTCGGAACCCG
GACCGCGACACTGCTGATCCTCAGCTCGAGAAAGAAGCGGCTGAGAAGCA
TCTTCAAGAACATCGGAATGCACAGGAAGCCATCCGTCGTATTGTCAGTG
TCGCCAACGGAAACACAAAGGACCACATGCGGCTTCACATCCAGAAATGC
ATTGAGACCTTTGGCCGGCATAAGACCGACAGCGTATTGCCGCCCAAGCC
ATCTGGCGTATCGCATGACTCTGCGACTGTTCATCTTGAGAAAACTCCCC
GCGTTGGTCCGGATACTGGCTCTCCGGAAGTACAGGTTGCCATTCTCACT
GCAAAGATCATGAACTTGTCTAGACATCTCCAGACGACGAAAAAGGACCG
ACACAACAAGCGCAACTTGCGTCTACTTGTTCACAAGAGACAGAAGTTGC
TTCGTTACTTGCGGAGGAAGGAAAGAGGTGGTCCCCGGTGGCAGAATCTG
ATGGAGAAGCTGGGTCTCTCGGAAGCTGCTTGGAAGGGTGAGATCTCCAT
GTAAATGCCTCCCCGCATTCTACTCCAGCCTTCATTGAGGGCCCTCACAG
GCCCTTCCTCCGTGCAGCTCCCATTTGCAGCATTGTCGCTCAACCCGGCG
AAAACCTCCGTAAGAGCTGGGTCTACAGAGTCTCGAGAGCGCAGACGCCA
TGACCCTTTCCTTATGGCGCAATCTCGCCAACGCAAGGCCGCCAACATCT
CTCGCCAGAAAGCCCTCACCAAAGAGCGCGAAGGGTCTGTCGGAGACCCC
GTCCAAAGCGAACCTACACCCTTTATCCAGGAACTCAGAAAGACCCAAGC
GACTTTGCAGGACACAGACCTCAATTACTTCGTCACACCGGATGGTCTCA
ATGAGGCGATGGAGTACTCGAAGAACCTGACATCACCGATTCGGAACCCG
GACCGCGACACTGCTGATCCTCAGCTCGAGAAAGAAGCGGCTGAGAAGCA
TCTTCAAGAACATCGGAATGCACAGGAAGCCATCCGTCGTATTGTCAGTG
TCGCCAACGGAAACACAAAGGACCACATGCGGCTTCACATCCAGAAATGC
ATTGAGACCTTTGGCCGGCATAAGACCGACAGCGTATTGCCGCCCAAGCC
ATCTGGCGTATCGCATGACTCTGCGACTGTTCATCTTGAGAAAACTCCCC
GCGTTGGTCCGGATACTGGCTCTCCGGAAGTACAGGTTGCCATTCTCACT
GCAAAGATCATGAACTTGTCTAGACATCTCCAGACGACGAAAAAGGACCG
ACACAACAAGCGCAACTTGCGTCTACTTGTTCACAAGAGACAGAAGTTGC
TTCGTTACTTGCGGAGGAAGGAAAGAGGTGGTCCCCGGTGGCAGAATCTG
ATGGAGAAGCTGGGTCTCTCGGAAGCTGCTTGGAAGGGTGAGATCTCCAT
GTAAATGCCTCCCCGCATTCTACTCCAGCCTTCATTGAGGGCCCTCACAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_001971CBS51388_001971Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001971-T1CBS51388_001971-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001971-T1.cdsCBS51388_001971-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001971-T1.exon2CBS51388_001971-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001971-T1.exon1CBS51388_001971-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG092643JW
DBxrefInterPro:IPR009068
DBxrefInterPro:IPR005290
DBxrefInterPro:IPR000589
DBxrefPFAM:PF00312
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:2295068..2296037 -
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