You are here

Home

CBS51388_001973-T1, CBS51388_001973-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001973-T1
Unique NameCBS51388_001973-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:2298086..2298923-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001973-T1 ID=CBS51388_001973-T1|Name=CBS51388_001973-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=838bp|location=Sequence derived from alignment at An02:2298086..2298923- (Aspergillus niger CBS 513.88)
ATGGCGGGAAACCACCTTGCGCAAGATGAACAGATAGTGACCATTCTGCT
CCTCGGAGACCCAGGATGTGGAAAAACGACATTCCTATCGTAAGTGCAAC
AGCTCTTAAGCACGTATTGCCTTATATGACATATTCCGTATCACGTAACT
AGTGTTATTCATTAACAACCAACTAGGAGCTTGAAATCCAATCTTCGTAG
ATACCAAGGTCAGGGACACAGTCAAGGGAATCTTGATCGAGAAACCCTCC
TACGAGACAGTGATCAGCCATTTATCTACGAGATCCGTTTCTCCAAAAGG
TCATTCACACTTGAAGTATATGACACCGCGAGTCCCAACCAACATTGGTC
TACCTTGCAGCCCGACGTTATACTTCTGGCATTTGATATTTCGAACAGAG
ATACCTTGAACAATCTTCGAAATGTAGGACATGTTCCTCTGTTGTGGCGG
CTGTGAATACTGACTTCCATGCCATAGTGGCGAAATGATATCACCAGATA
CTTCCAGAATGGATATGGCGAACGCATTCCCATTATGTTGATTGGGTTGA
AGAGAGACCTGAGGGTGGAAGGTGATGGTATCATATATCCTCAAGAGGTG
AGTAGACCATTTCTATGACCATGGAAAGTCTATCTGTGGCACACGCAGGC
TTAGAGCTAACTGATATTATATAAAGTCGTATCGGATTGCGCAGGAACTT
CGATGTGATCGGTATGCGGAGTGCTCTGCTGTCACTGAGGAACTCTTACC
AGAGACGTTTGAAGATATTGCCCGGCTTGCTGGAATGACGACCACGGCGG
CTGGGGGCCAGACTGCTGGAGCTTGTGTTATTCTTTAG
back to top

Coding sequence (CDS) from alignment at An02:2298086..2298923-

>CBS51388_001973-T1 ID=CBS51388_001973-T1|Name=CBS51388_001973-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2376bp|location=Sequence derived from alignment at An02:2298086..2298923- (Aspergillus niger CBS 513.88)
TCGTATCGGATTGCGCAGGAACTTCGATGTGATCGGTATGCGGAGTGCTC
TGCTGTCACTGAGGAACTCTTACCAGAGACGTTTGAAGATATTGCCCGGC
TTGCTGGAATGACGACCACGGCGGCTGGGGGCCAGACTGCTGGAGCTTGT
GTTATTCTTTAGTGGCGAAATGATATCACCAGATACTTCCAGAATGGATA
TGGCGAACGCATTCCCATTATGTTGATTGGGTTGAAGAGAGACCTGAGGG
TGGAAGGTGATGGTATCATATATCCTCAAGAGATACCAAGGTCAGGGACA
CAGTCAAGGGAATCTTGATCGAGAAACCCTCCTACGAGACAGTGATCAGC
CATTTATCTACGAGATCCGTTTCTCCAAAAGGTCATTCACACTTGAAGTA
TATGACACCGCGAGTCCCAACCAACATTGGTCTACCTTGCAGCCCGACGT
TATACTTCTGGCATTTGATATTTCGAACAGAGATACCTTGAACAATCTTC
GAAATATGGCGGGAAACCACCTTGCGCAAGATGAACAGATAGTGACCATT
CTGCTCCTCGGAGACCCAGGATGTGGAAAAACGACATTCCTATCTCGTAT
CGGATTGCGCAGGAACTTCGATGTGATCGGTATGCGGAGTGCTCTGCTGT
CACTGAGGAACTCTTACCAGAGACGTTTGAAGATATTGCCCGGCTTGCTG
GAATGACGACCACGGCGGCTGGGGGCCAGACTGCTGGAGCTTGTGTTATT
CTTTAGTGGCGAAATGATATCACCAGATACTTCCAGAATGGATATGGCGA
ACGCATTCCCATTATGTTGATTGGGTTGAAGAGAGACCTGAGGGTGGAAG
GTGATGGTATCATATATCCTCAAGAGATACCAAGGTCAGGGACACAGTCA
AGGGAATCTTGATCGAGAAACCCTCCTACGAGACAGTGATCAGCCATTTA
TCTACGAGATCCGTTTCTCCAAAAGGTCATTCACACTTGAAGTATATGAC
ACCGCGAGTCCCAACCAACATTGGTCTACCTTGCAGCCCGACGTTATACT
TCTGGCATTTGATATTTCGAACAGAGATACCTTGAACAATCTTCGAAATA
TGGCGGGAAACCACCTTGCGCAAGATGAACAGATAGTGACCATTCTGCTC
CTCGGAGACCCAGGATGTGGAAAAACGACATTCCTATCTCGTATCGGATT
GCGCAGGAACTTCGATGTGATCGGTATGCGGAGTGCTCTGCTGTCACTGA
GGAACTCTTACCAGAGACGTTTGAAGATATTGCCCGGCTTGCTGGAATGA
CGACCACGGCGGCTGGGGGCCAGACTGCTGGAGCTTGTGTTATTCTTTAG
TGGCGAAATGATATCACCAGATACTTCCAGAATGGATATGGCGAACGCAT
TCCCATTATGTTGATTGGGTTGAAGAGAGACCTGAGGGTGGAAGGTGATG
GTATCATATATCCTCAAGAGATACCAAGGTCAGGGACACAGTCAAGGGAA
TCTTGATCGAGAAACCCTCCTACGAGACAGTGATCAGCCATTTATCTACG
AGATCCGTTTCTCCAAAAGGTCATTCACACTTGAAGTATATGACACCGCG
AGTCCCAACCAACATTGGTCTACCTTGCAGCCCGACGTTATACTTCTGGC
ATTTGATATTTCGAACAGAGATACCTTGAACAATCTTCGAAATATGGCGG
GAAACCACCTTGCGCAAGATGAACAGATAGTGACCATTCTGCTCCTCGGA
GACCCAGGATGTGGAAAAACGACATTCCTATCTCGTATCGGATTGCGCAG
GAACTTCGATGTGATCGGTATGCGGAGTGCTCTGCTGTCACTGAGGAACT
CTTACCAGAGACGTTTGAAGATATTGCCCGGCTTGCTGGAATGACGACCA
CGGCGGCTGGGGGCCAGACTGCTGGAGCTTGTGTTATTCTTTAGTGGCGA
AATGATATCACCAGATACTTCCAGAATGGATATGGCGAACGCATTCCCAT
TATGTTGATTGGGTTGAAGAGAGACCTGAGGGTGGAAGGTGATGGTATCA
TATATCCTCAAGAGATACCAAGGTCAGGGACACAGTCAAGGGAATCTTGA
TCGAGAAACCCTCCTACGAGACAGTGATCAGCCATTTATCTACGAGATCC
GTTTCTCCAAAAGGTCATTCACACTTGAAGTATATGACACCGCGAGTCCC
AACCAACATTGGTCTACCTTGCAGCCCGACGTTATACTTCTGGCATTTGA
TATTTCGAACAGAGATACCTTGAACAATCTTCGAAATATGGCGGGAAACC
ACCTTGCGCAAGATGAACAGATAGTGACCATTCTGCTCCTCGGAGACCCA
GGATGTGGAAAAACGACATTCCTATC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_001973CBS51388_001973Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001973-T1CBS51388_001973-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001973-T1.cdsCBS51388_001973-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001973-T1.exon4CBS51388_001973-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_001973-T1.exon3CBS51388_001973-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_001973-T1.exon2CBS51388_001973-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001973-T1.exon1CBS51388_001973-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR001806
DBxrefPFAM:PF00071
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:2298086..2298923 -
Powered by Drupal