|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:2307814..2309750+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001978-T1 ID=CBS51388_001978-T1|Name=CBS51388_001978-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1937bp|location=Sequence derived from alignment at An02:2307814..2309750+ (Aspergillus niger CBS 513.88)
ATGACGCTCTTTATCCTTACGGAAACCAGCGCGGGCTATGCCCTGCTCAA
GGCCAAGGACAAGAAGCTGTTGAAGAGAGATGATCTGGCTACTGAGGCTT
CCACCGCAGAGGGTGTTTCTAACCTGTAAGTGCATTCTCATGCATTGTTT
ACTCTATTCACCCCCGATTGTCCGTCATCTGCGCGTGGTGTCTCAAAAGC
AAAAATTTTCCCCCACCGCGTCTGTACTTCGGCTAACCGCCGCAATTGTA
GTCTGAAGTTGAAGAGCTTCCAGAAGTTCGACAGCGCTGCTACCGCCCTG
GAGGAGGTCGCTTCCCTCGTCGAAGGAAAGGTTACTCCTCGCCTGGCCAG
CCTTTTGGACGAAGTCAAGGATGAGAAGAAGGTCTCTCTGGCTGTCGCCG
ACCCCAAGCTCGGTATGTGGCGCAAAGTTGTGTGGAAACTGAGGGTAAAT
TTTTCGTATGACTGACTGGAATTGGTGTAGGCAATGCTATTGGCAAGCTC
CCTGGCCTCTCCATCGAGCTGGTGGCCGACTCTTCCACGACCGACGTCTT
CCGTGCCATTCGTGAACACCTGCCCACTCTTATTCCCGGTCTTCTTCCTC
AGGACATGTCCACCATGTCCCTTGGTCTGTCGCACTCTCTCGCTAGACAC
AAGCTCAAGTTCTCCCCCGACAAGATCGACACTATGATTGTGCAGGCCAT
TGGTCTGCTTGACGACTTGGACAAGGAGCTCAACAACTACGCCATGCGTG
TGAAGGAATGGTATGGCTGGCACTTCCCTGAGCTGGCGAAGATCTTGAAC
GACAACATCGCCTACGCCAGACTCGTCCTCAAGATGGGCATGCGCACCAA
CTGGGAGTCTTCGGACCTCGCTGAGATTCTCCCCGAGGAGATTGAGGGTG
CCGTCAAGGCTGCTGCGGACCGCTCCATGGGTACCGAGATCAGCCAGGAG
GATCTGGAACACATTCAAGCTTTGGCCGAGCAGGTTGTTGGCTTCGCTGA
ATACCGTCAACAACTGGCTGGCTACCTTACCGCCCGTATGAACGCCATCG
CCCCCAACCTGACTGCCCTTGTCGGTGATCTGGTCGGTGCTCGTCTTATC
GCCCACGCTGGTAGCTTGACCAACCTGTCCAAGAGCCCCGCCAGTACTCT
CCAGATCCTGGGTGCCGAGAAGGCCCTGTTCCGTGCTCTCAAGACCAAGC
ACGATACCCCCAAGTACGGTCTGATCTACCACGCTTCCCTGATCGGCCAG
GCCACCGGCAAGAACAAGGGTAAGATGGCCAGAGTTCTCGCTGCCAAGGC
TTCCCTTGGTCTGCGTGTGGATGCCCTCGCTGAGTGGGACGATGATGCCA
CCGAGGAGGACAAGGCTGCTCTCGGTACGGAAGCTCGCTACAACCTCGAG
CGCAAGCTGGCCGCCATGGAGGGCAAGCCCCTCAAGCCTCGTGGTGTTGC
CATTGCCCCCAACGGCGCTCCTCAGGCCCAGAAGTTCGAAATCAACGAAG
CCCGCAAATACAACGCCGATGCTGATGCTGTTACGGGTGACGAGCCCGCT
TCCGCTAAGAAGAGCAAGAGCAAGAAGCTCGTAGAGGAGGTTCAGGACGA
GGAGATGGCCGATGCCGCCGACTCCGACGAGGAGTCTGACTCGTCCGACG
AGGAGACCGACAAGAAGTCCAAGAAGAGCAAGGACTCTGAGCTCGAGAAG
TTGGCCGAGAAGGCCGGTCTGAGCCTCAAGCGGTACAAGCGCAAGCTTGA
GCGTGGAGAAATCCAGTTCGACGCTGAGGGCAACCCCAGCGCAGTCAGCA
AGAAGGACATCAAGAAGGCCAAGAAGGAGGCTAAGAAGTCGGCCAAGGGT
GAGGAGAAGAAGCGCAAGCGGACAGACGACGGCGAAGTCGACAACTCCGA
GAAGAAAAAGAAGAAGAAGAAGAAGGGCGAGGAGTAA back to topCoding sequence (CDS) from alignment at An02:2307814..2309750+ >CBS51388_001978-T1 ID=CBS51388_001978-T1|Name=CBS51388_001978-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5229bp|location=Sequence derived from alignment at An02:2307814..2309750+ (Aspergillus niger CBS 513.88)
ATGACGCTCTTTATCCTTACGGAAACCAGCGCGGGCTATGCCCTGCTCAA
GGCCAAGGACAAGAAGCTGTTGAAGAGAGATGATCTGGCTACTGAGGCTT
CCACCGCAGAGGGTGTTTCTAACCTTCTGAAGTTGAAGAGCTTCCAGAAG
TTCGACAGCGCTGCTACCGCCCTGGAGGAGGTCGCTTCCCTCGTCGAAGG
AAAGGTTACTCCTCGCCTGGCCAGCCTTTTGGACGAAGTCAAGGATGAGA
AGAAGGTCTCTCTGGCTGTCGCCGACCCCAAGCTCGGCAATGCTATTGGC
AAGCTCCCTGGCCTCTCCATCGAGCTGGTGGCCGACTCTTCCACGACCGA
CGTCTTCCGTGCCATTCGTGAACACCTGCCCACTCTTATTCCCGGTCTTC
TTCCTCAGGACATGTCCACCATGTCCCTTGGTCTGTCGCACTCTCTCGCT
AGACACAAGCTCAAGTTCTCCCCCGACAAGATCGACACTATGATTGTGCA
GGCCATTGGTCTGCTTGACGACTTGGACAAGGAGCTCAACAACTACGCCA
TGCGTGTGAAGGAATGGTATGGCTGGCACTTCCCTGAGCTGGCGAAGATC
TTGAACGACAACATCGCCTACGCCAGACTCGTCCTCAAGATGGGCATGCG
CACCAACTGGGAGTCTTCGGACCTCGCTGAGATTCTCCCCGAGGAGATTG
AGGGTGCCGTCAAGGCTGCTGCGGACCGCTCCATGGGTACCGAGATCAGC
CAGGAGGATCTGGAACACATTCAAGCTTTGGCCGAGCAGGTTGTTGGCTT
CGCTGAATACCGTCAACAACTGGCTGGCTACCTTACCGCCCGTATGAACG
CCATCGCCCCCAACCTGACTGCCCTTGTCGGTGATCTGGTCGGTGCTCGT
CTTATCGCCCACGCTGGTAGCTTGACCAACCTGTCCAAGAGCCCCGCCAG
TACTCTCCAGATCCTGGGTGCCGAGAAGGCCCTGTTCCGTGCTCTCAAGA
CCAAGCACGATACCCCCAAGTACGGTCTGATCTACCACGCTTCCCTGATC
GGCCAGGCCACCGGCAAGAACAAGGGTAAGATGGCCAGAGTTCTCGCTGC
CAAGGCTTCCCTTGGTCTGCGTGTGGATGCCCTCGCTGAGTGGGACGATG
ATGCCACCGAGGAGGACAAGGCTGCTCTCGGTACGGAAGCTCGCTACAAC
CTCGAGCGCAAGCTGGCCGCCATGGAGGGCAAGCCCCTCAAGCCTCGTGG
TGTTGCCATTGCCCCCAACGGCGCTCCTCAGGCCCAGAAGTTCGAAATCA
ACGAAGCCCGCAAATACAACGCCGATGCTGATGCTGTTACGGGTGACGAG
CCCGCTTCCGCTAAGAAGAGCAAGAGCAAGAAGCTCGTAGAGGAGGTTCA
GGACGAGGAGATGGCCGATGCCGCCGACTCCGACGAGGAGTCTGACTCGT
CCGACGAGGAGACCGACAAGAAGTCCAAGAAGAGCAAGGACTCTGAGCTC
GAGAAGTTGGCCGAGAAGGCCGGTCTGAGCCTCAAGCGGTACAAGCGCAA
GCTTGAGCGTGGAGAAATCCAGTTCGACGCTGAGGGCAACCCCAGCGCAG
TCAGCAAGAAGGACATCAAGAAGGCCAAGAAGGAGGCTAAGAAGTCGGCC
AAGGGTGAGGAGAAGAAGCGCAAGCGGACAGACGACGGCGAAGTCGACAA
CTCCGAGAAGAAAAAGAAGAAGAAGAAGAAGGGCGAGGAGTAAATGACGC
TCTTTATCCTTACGGAAACCAGCGCGGGCTATGCCCTGCTCAAGGCCAAG
GACAAGAAGCTGTTGAAGAGAGATGATCTGGCTACTGAGGCTTCCACCGC
AGAGGGTGTTTCTAACCTTCTGAAGTTGAAGAGCTTCCAGAAGTTCGACA
GCGCTGCTACCGCCCTGGAGGAGGTCGCTTCCCTCGTCGAAGGAAAGGTT
ACTCCTCGCCTGGCCAGCCTTTTGGACGAAGTCAAGGATGAGAAGAAGGT
CTCTCTGGCTGTCGCCGACCCCAAGCTCGGCAATGCTATTGGCAAGCTCC
CTGGCCTCTCCATCGAGCTGGTGGCCGACTCTTCCACGACCGACGTCTTC
CGTGCCATTCGTGAACACCTGCCCACTCTTATTCCCGGTCTTCTTCCTCA
GGACATGTCCACCATGTCCCTTGGTCTGTCGCACTCTCTCGCTAGACACA
AGCTCAAGTTCTCCCCCGACAAGATCGACACTATGATTGTGCAGGCCATT
GGTCTGCTTGACGACTTGGACAAGGAGCTCAACAACTACGCCATGCGTGT
GAAGGAATGGTATGGCTGGCACTTCCCTGAGCTGGCGAAGATCTTGAACG
ACAACATCGCCTACGCCAGACTCGTCCTCAAGATGGGCATGCGCACCAAC
TGGGAGTCTTCGGACCTCGCTGAGATTCTCCCCGAGGAGATTGAGGGTGC
CGTCAAGGCTGCTGCGGACCGCTCCATGGGTACCGAGATCAGCCAGGAGG
ATCTGGAACACATTCAAGCTTTGGCCGAGCAGGTTGTTGGCTTCGCTGAA
TACCGTCAACAACTGGCTGGCTACCTTACCGCCCGTATGAACGCCATCGC
CCCCAACCTGACTGCCCTTGTCGGTGATCTGGTCGGTGCTCGTCTTATCG
CCCACGCTGGTAGCTTGACCAACCTGTCCAAGAGCCCCGCCAGTACTCTC
CAGATCCTGGGTGCCGAGAAGGCCCTGTTCCGTGCTCTCAAGACCAAGCA
CGATACCCCCAAGTACGGTCTGATCTACCACGCTTCCCTGATCGGCCAGG
CCACCGGCAAGAACAAGGGTAAGATGGCCAGAGTTCTCGCTGCCAAGGCT
TCCCTTGGTCTGCGTGTGGATGCCCTCGCTGAGTGGGACGATGATGCCAC
CGAGGAGGACAAGGCTGCTCTCGGTACGGAAGCTCGCTACAACCTCGAGC
GCAAGCTGGCCGCCATGGAGGGCAAGCCCCTCAAGCCTCGTGGTGTTGCC
ATTGCCCCCAACGGCGCTCCTCAGGCCCAGAAGTTCGAAATCAACGAAGC
CCGCAAATACAACGCCGATGCTGATGCTGTTACGGGTGACGAGCCCGCTT
CCGCTAAGAAGAGCAAGAGCAAGAAGCTCGTAGAGGAGGTTCAGGACGAG
GAGATGGCCGATGCCGCCGACTCCGACGAGGAGTCTGACTCGTCCGACGA
GGAGACCGACAAGAAGTCCAAGAAGAGCAAGGACTCTGAGCTCGAGAAGT
TGGCCGAGAAGGCCGGTCTGAGCCTCAAGCGGTACAAGCGCAAGCTTGAG
CGTGGAGAAATCCAGTTCGACGCTGAGGGCAACCCCAGCGCAGTCAGCAA
GAAGGACATCAAGAAGGCCAAGAAGGAGGCTAAGAAGTCGGCCAAGGGTG
AGGAGAAGAAGCGCAAGCGGACAGACGACGGCGAAGTCGACAACTCCGAG
AAGAAAAAGAAGAAGAAGAAGAAGGGCGAGGAGTAAATGACGCTCTTTAT
CCTTACGGAAACCAGCGCGGGCTATGCCCTGCTCAAGGCCAAGGACAAGA
AGCTGTTGAAGAGAGATGATCTGGCTACTGAGGCTTCCACCGCAGAGGGT
GTTTCTAACCTTCTGAAGTTGAAGAGCTTCCAGAAGTTCGACAGCGCTGC
TACCGCCCTGGAGGAGGTCGCTTCCCTCGTCGAAGGAAAGGTTACTCCTC
GCCTGGCCAGCCTTTTGGACGAAGTCAAGGATGAGAAGAAGGTCTCTCTG
GCTGTCGCCGACCCCAAGCTCGGCAATGCTATTGGCAAGCTCCCTGGCCT
CTCCATCGAGCTGGTGGCCGACTCTTCCACGACCGACGTCTTCCGTGCCA
TTCGTGAACACCTGCCCACTCTTATTCCCGGTCTTCTTCCTCAGGACATG
TCCACCATGTCCCTTGGTCTGTCGCACTCTCTCGCTAGACACAAGCTCAA
GTTCTCCCCCGACAAGATCGACACTATGATTGTGCAGGCCATTGGTCTGC
TTGACGACTTGGACAAGGAGCTCAACAACTACGCCATGCGTGTGAAGGAA
TGGTATGGCTGGCACTTCCCTGAGCTGGCGAAGATCTTGAACGACAACAT
CGCCTACGCCAGACTCGTCCTCAAGATGGGCATGCGCACCAACTGGGAGT
CTTCGGACCTCGCTGAGATTCTCCCCGAGGAGATTGAGGGTGCCGTCAAG
GCTGCTGCGGACCGCTCCATGGGTACCGAGATCAGCCAGGAGGATCTGGA
ACACATTCAAGCTTTGGCCGAGCAGGTTGTTGGCTTCGCTGAATACCGTC
AACAACTGGCTGGCTACCTTACCGCCCGTATGAACGCCATCGCCCCCAAC
CTGACTGCCCTTGTCGGTGATCTGGTCGGTGCTCGTCTTATCGCCCACGC
TGGTAGCTTGACCAACCTGTCCAAGAGCCCCGCCAGTACTCTCCAGATCC
TGGGTGCCGAGAAGGCCCTGTTCCGTGCTCTCAAGACCAAGCACGATACC
CCCAAGTACGGTCTGATCTACCACGCTTCCCTGATCGGCCAGGCCACCGG
CAAGAACAAGGGTAAGATGGCCAGAGTTCTCGCTGCCAAGGCTTCCCTTG
GTCTGCGTGTGGATGCCCTCGCTGAGTGGGACGATGATGCCACCGAGGAG
GACAAGGCTGCTCTCGGTACGGAAGCTCGCTACAACCTCGAGCGCAAGCT
GGCCGCCATGGAGGGCAAGCCCCTCAAGCCTCGTGGTGTTGCCATTGCCC
CCAACGGCGCTCCTCAGGCCCAGAAGTTCGAAATCAACGAAGCCCGCAAA
TACAACGCCGATGCTGATGCTGTTACGGGTGACGAGCCCGCTTCCGCTAA
GAAGAGCAAGAGCAAGAAGCTCGTAGAGGAGGTTCAGGACGAGGAGATGG
CCGATGCCGCCGACTCCGACGAGGAGTCTGACTCGTCCGACGAGGAGACC
GACAAGAAGTCCAAGAAGAGCAAGGACTCTGAGCTCGAGAAGTTGGCCGA
GAAGGCCGGTCTGAGCCTCAAGCGGTACAAGCGCAAGCTTGAGCGTGGAG
AAATCCAGTTCGACGCTGAGGGCAACCCCAGCGCAGTCAGCAAGAAGGAC
ATCAAGAAGGCCAAGAAGGAGGCTAAGAAGTCGGCCAAGGGTGAGGAGAA
GAAGCGCAAGCGGACAGACGACGGCGAAGTCGACAACTCCGAGAAGAAAA
AGAAGAAGAAGAAGAAGGGCGAGGAGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036070 |
| DBxref | InterPro:IPR012974 |
| DBxref | InterPro:IPR029012 |
| DBxref | InterPro:IPR002687 |
| DBxref | InterPro:IPR042239 |
| DBxref | InterPro:IPR012976 |
| DBxref | PFAM:PF08156 |
| DBxref | PFAM:PF01798 |
| Product | Nucleolar protein 58 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:2307814..2309750 + |
|
