|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:2385298..2387154- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002002-T1 ID=CBS51388_002002-T1|Name=CBS51388_002002-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1857bp|location=Sequence derived from alignment at An02:2385298..2387154- (Aspergillus niger CBS 513.88)
ATGGGGTCGTTAGAGGCTGAGCACAGGCACAGGTATGTTTACCCTATGGT
AGCTTATCGCAAATAGCCATGCGGGTGTTCTCCGACAGCAAAGGTGCTAA
TGATTGTTTGCTTCTTAGGGAACATCTACCAGCGCTGGGTTATCTTGGTA
AAGACGGACCCAGCTACGCTCCGAAGCACCCTGGTATAGCAACAGCACAT
ACGTCCTCGCCAACACCACTGTTAAGTCCAACCACCATGTATCCAGGCCA
ACCCTTACCTGTCTCCTACACTACATCGACTGGTTCTGGTCATTTGCAAG
CTGGATACATATCACCCCCGGATTCGCGCCGCGCGCTTGAGGAGGAGAAG
GACAAACAGCAGCAACAGCCTCAGAGGCAATCGCTTCCGTCAATCCATGA
GGCTCTAGGGAATGACAACCATTTACCATACCCTGCGCCGACTCCGGCTC
CACAGCAAGCTCATCACGCGCCACCTCATTCCTTACCTCCTAACATTGTC
GGGCGGCCAGCCACTGAGGGACCTCCAGGGCCGCCGAATCCCTTTTCGAG
CGGAGCAGCAACTGGCCCTTTCGTGCGGGAACCTGCTTTTCAGCACCAAC
TGCAAGCAGAAGCCTCAAGGTCGAGCTTGACATCGATCAACACCCAAGAT
TCGAGAAACGCGTCCTTGCAATCACTTAATTCCGGAAAATCACCTACTCA
AAGTGCGAAGACCGGCATTACTTCGATTTCCGGATCCCAAGTTGGCTCTG
GTTATGAGTACAGCGCGCCTCCTTCTGCTGGCAGTGTGGCCTCGCCTAAT
GGTTATGGTGCGTTTTCACAATCATTCTCATTTCAGCCGCAGCCCCCATC
AAATGCACCAGCGTATCCCTCAGCTTCTTATGATGCTCGAACCTATGGGG
GGACATCTTGGAAACCTGGTGTACCAGAAACTGCTCGCGTGGACGATGTA
AAACCGGGTCTAGCGACCCGTCCAGCCATTGCGGGGCAACCACAAAGCGA
TTCTGTCAAACGTCACCTGGATATTTACGATGTGGAGACATCCCTGAATG
AGGTATGTGATTTTCTACTATGGGACCAAGTGGACCGAAAATGAATCGCC
AATTGGTTCTTTGATATGTGGTGCCAAATCGCTAATTATACTAGATTGCC
GAGATGAGCACAAGAACCTTGGATTTTTCCAGGCACTATGCGGCAAGGGC
ACACCACACTCAGCGGTCTGGCCCTGTATTGGGTTCCCTGCCCTCGATCC
ACGAAGTTGAGGAGATGCTCAATATACAGCGTCGTAATCAGGATGCTTTG
ATTCGCATACGGACAGCAATTTTGAACCAGGAACATGCCATGGCAGAACA
GATGGCTCAAAGAAAGGCTTTCAAAGCCGGTGGGGTACATGAACGATGTC
CACCACATGGCAATGTACCAGGAGGAATACAAGGGCAGTGGCGGGTTCGC
TGGCCCCGATTCCAAAAAACGACGAGGGGTATGTCTACTCTGGATATTTT
CTCTTTCCGTTGTTTCTCATTCACCGTACCCATTTCCCCCTTGCCCCTCA
ATCCCGTTTACTAAGGGATTGCCCCTCGCCTCTCACTTCTTCACAAGTAT
ACCCACTTCTACTTTTGCCATCGCTAACAGCGGCGCTCCTGCAGAAAGCT
GCCCCTCCCGGTCGTTGCCACAGTTGCAACCGAGCCGAAACGCCGGAATG
GCGCCGTGGACCCGACGGTGCCCGGACCTTGTGTAATGCGTGCGGCCTGC
ACTATGCAAAATTAACTCGGAAGATGGGCGCGAACAAGGCATCCTCGTTG
GGTTCAAATCTGAAACCCAAAACTGCCTTGGACTCCGCATCACCGAGTAG
CCATTAA back to topCoding sequence (CDS) from alignment at An02:2385298..2387154- >CBS51388_002002-T1 ID=CBS51388_002002-T1|Name=CBS51388_002002-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6108bp|location=Sequence derived from alignment at An02:2385298..2387154- (Aspergillus niger CBS 513.88)
CGGCGCTCCTGCAGAAAGCTGCCCCTCCCGGTCGTTGCCACAGTTGCAAC
CGAGCCGAAACGCCGGAATGGCGCCGTGGACCCGACGGTGCCCGGACCTT
GTGTAATGCGTGCGGCCTGCACTATGCAAAATTAACTCGGAAGATGGGCG
CGAACAAGGCATCCTCGTTGGGTTCAAATCTGAAACCCAAAACTGCCTTG
GACTCCGCATCACCGAGTAGCCATTAAATTGCCGAGATGAGCACAAGAAC
CTTGGATTTTTCCAGGCACTATGCGGCAAGGGCACACCACACTCAGCGGT
CTGGCCCTGTATTGGGTTCCCTGCCCTCGATCCACGAAGTTGAGGAGATG
CTCAATATACAGCGTCGTAATCAGGATGCTTTGATTCGCATACGGACAGC
AATTTTGAACCAGGAACATGCCATGGCAGAACAGATGGCTCAAAGAAAGG
CTTTCAAAGCCGGTGGGGTACATGAACGATGTCCACCACATGGCAATGTA
CCAGGAGGAATACAAGGGCAGTGGCGGGTTCGCTGGCCCCGATTCCAAAA
AACGACGAGGGGGAACATCTACCAGCGCTGGGTTATCTTGGTAAAGACGG
ACCCAGCTACGCTCCGAAGCACCCTGGTATAGCAACAGCACATACGTCCT
CGCCAACACCACTGTTAAGTCCAACCACCATGTATCCAGGCCAACCCTTA
CCTGTCTCCTACACTACATCGACTGGTTCTGGTCATTTGCAAGCTGGATA
CATATCACCCCCGGATTCGCGCCGCGCGCTTGAGGAGGAGAAGGACAAAC
AGCAGCAACAGCCTCAGAGGCAATCGCTTCCGTCAATCCATGAGGCTCTA
GGGAATGACAACCATTTACCATACCCTGCGCCGACTCCGGCTCCACAGCA
AGCTCATCACGCGCCACCTCATTCCTTACCTCCTAACATTGTCGGGCGGC
CAGCCACTGAGGGACCTCCAGGGCCGCCGAATCCCTTTTCGAGCGGAGCA
GCAACTGGCCCTTTCGTGCGGGAACCTGCTTTTCAGCACCAACTGCAAGC
AGAAGCCTCAAGGTCGAGCTTGACATCGATCAACACCCAAGATTCGAGAA
ACGCGTCCTTGCAATCACTTAATTCCGGAAAATCACCTACTCAAAGTGCG
AAGACCGGCATTACTTCGATTTCCGGATCCCAAGTTGGCTCTGGTTATGA
GTACAGCGCGCCTCCTTCTGCTGGCAGTGTGGCCTCGCCTAATGGTTATG
GTGCGTTTTCACAATCATTCTCATTTCAGCCGCAGCCCCCATCAAATGCA
CCAGCGTATCCCTCAGCTTCTTATGATGCTCGAACCTATGGGGGGACATC
TTGGAAACCTGGTGTACCAGAAACTGCTCGCGTGGACGATGTAAAACCGG
GTCTAGCGACCCGTCCAGCCATTGCGGGGCAACCACAAAGCGATTCTGTC
AAACGTCACCTGGATATTTACGATGTGGAGACATCCCTGAATGAGATGGG
GTCGTTAGAGGCTGAGCACAGGCACAGCGGCGCTCCTGCAGAAAGCTGCC
CCTCCCGGTCGTTGCCACAGTTGCAACCGAGCCGAAACGCCGGAATGGCG
CCGTGGACCCGACGGTGCCCGGACCTTGTGTAATGCGTGCGGCCTGCACT
ATGCAAAATTAACTCGGAAGATGGGCGCGAACAAGGCATCCTCGTTGGGT
TCAAATCTGAAACCCAAAACTGCCTTGGACTCCGCATCACCGAGTAGCCA
TTAAATTGCCGAGATGAGCACAAGAACCTTGGATTTTTCCAGGCACTATG
CGGCAAGGGCACACCACACTCAGCGGTCTGGCCCTGTATTGGGTTCCCTG
CCCTCGATCCACGAAGTTGAGGAGATGCTCAATATACAGCGTCGTAATCA
GGATGCTTTGATTCGCATACGGACAGCAATTTTGAACCAGGAACATGCCA
TGGCAGAACAGATGGCTCAAAGAAAGGCTTTCAAAGCCGGTGGGGTACAT
GAACGATGTCCACCACATGGCAATGTACCAGGAGGAATACAAGGGCAGTG
GCGGGTTCGCTGGCCCCGATTCCAAAAAACGACGAGGGGGAACATCTACC
AGCGCTGGGTTATCTTGGTAAAGACGGACCCAGCTACGCTCCGAAGCACC
CTGGTATAGCAACAGCACATACGTCCTCGCCAACACCACTGTTAAGTCCA
ACCACCATGTATCCAGGCCAACCCTTACCTGTCTCCTACACTACATCGAC
TGGTTCTGGTCATTTGCAAGCTGGATACATATCACCCCCGGATTCGCGCC
GCGCGCTTGAGGAGGAGAAGGACAAACAGCAGCAACAGCCTCAGAGGCAA
TCGCTTCCGTCAATCCATGAGGCTCTAGGGAATGACAACCATTTACCATA
CCCTGCGCCGACTCCGGCTCCACAGCAAGCTCATCACGCGCCACCTCATT
CCTTACCTCCTAACATTGTCGGGCGGCCAGCCACTGAGGGACCTCCAGGG
CCGCCGAATCCCTTTTCGAGCGGAGCAGCAACTGGCCCTTTCGTGCGGGA
ACCTGCTTTTCAGCACCAACTGCAAGCAGAAGCCTCAAGGTCGAGCTTGA
CATCGATCAACACCCAAGATTCGAGAAACGCGTCCTTGCAATCACTTAAT
TCCGGAAAATCACCTACTCAAAGTGCGAAGACCGGCATTACTTCGATTTC
CGGATCCCAAGTTGGCTCTGGTTATGAGTACAGCGCGCCTCCTTCTGCTG
GCAGTGTGGCCTCGCCTAATGGTTATGGTGCGTTTTCACAATCATTCTCA
TTTCAGCCGCAGCCCCCATCAAATGCACCAGCGTATCCCTCAGCTTCTTA
TGATGCTCGAACCTATGGGGGGACATCTTGGAAACCTGGTGTACCAGAAA
CTGCTCGCGTGGACGATGTAAAACCGGGTCTAGCGACCCGTCCAGCCATT
GCGGGGCAACCACAAAGCGATTCTGTCAAACGTCACCTGGATATTTACGA
TGTGGAGACATCCCTGAATGAGATGGGGTCGTTAGAGGCTGAGCACAGGC
ACAGCGGCGCTCCTGCAGAAAGCTGCCCCTCCCGGTCGTTGCCACAGTTG
CAACCGAGCCGAAACGCCGGAATGGCGCCGTGGACCCGACGGTGCCCGGA
CCTTGTGTAATGCGTGCGGCCTGCACTATGCAAAATTAACTCGGAAGATG
GGCGCGAACAAGGCATCCTCGTTGGGTTCAAATCTGAAACCCAAAACTGC
CTTGGACTCCGCATCACCGAGTAGCCATTAAATTGCCGAGATGAGCACAA
GAACCTTGGATTTTTCCAGGCACTATGCGGCAAGGGCACACCACACTCAG
CGGTCTGGCCCTGTATTGGGTTCCCTGCCCTCGATCCACGAAGTTGAGGA
GATGCTCAATATACAGCGTCGTAATCAGGATGCTTTGATTCGCATACGGA
CAGCAATTTTGAACCAGGAACATGCCATGGCAGAACAGATGGCTCAAAGA
AAGGCTTTCAAAGCCGGTGGGGTACATGAACGATGTCCACCACATGGCAA
TGTACCAGGAGGAATACAAGGGCAGTGGCGGGTTCGCTGGCCCCGATTCC
AAAAAACGACGAGGGGGAACATCTACCAGCGCTGGGTTATCTTGGTAAAG
ACGGACCCAGCTACGCTCCGAAGCACCCTGGTATAGCAACAGCACATACG
TCCTCGCCAACACCACTGTTAAGTCCAACCACCATGTATCCAGGCCAACC
CTTACCTGTCTCCTACACTACATCGACTGGTTCTGGTCATTTGCAAGCTG
GATACATATCACCCCCGGATTCGCGCCGCGCGCTTGAGGAGGAGAAGGAC
AAACAGCAGCAACAGCCTCAGAGGCAATCGCTTCCGTCAATCCATGAGGC
TCTAGGGAATGACAACCATTTACCATACCCTGCGCCGACTCCGGCTCCAC
AGCAAGCTCATCACGCGCCACCTCATTCCTTACCTCCTAACATTGTCGGG
CGGCCAGCCACTGAGGGACCTCCAGGGCCGCCGAATCCCTTTTCGAGCGG
AGCAGCAACTGGCCCTTTCGTGCGGGAACCTGCTTTTCAGCACCAACTGC
AAGCAGAAGCCTCAAGGTCGAGCTTGACATCGATCAACACCCAAGATTCG
AGAAACGCGTCCTTGCAATCACTTAATTCCGGAAAATCACCTACTCAAAG
TGCGAAGACCGGCATTACTTCGATTTCCGGATCCCAAGTTGGCTCTGGTT
ATGAGTACAGCGCGCCTCCTTCTGCTGGCAGTGTGGCCTCGCCTAATGGT
TATGGTGCGTTTTCACAATCATTCTCATTTCAGCCGCAGCCCCCATCAAA
TGCACCAGCGTATCCCTCAGCTTCTTATGATGCTCGAACCTATGGGGGGA
CATCTTGGAAACCTGGTGTACCAGAAACTGCTCGCGTGGACGATGTAAAA
CCGGGTCTAGCGACCCGTCCAGCCATTGCGGGGCAACCACAAAGCGATTC
TGTCAAACGTCACCTGGATATTTACGATGTGGAGACATCCCTGAATGAGA
TGGGGTCGTTAGAGGCTGAGCACAGGCACAGCGGCGCTCCTGCAGAAAGC
TGCCCCTCCCGGTCGTTGCCACAGTTGCAACCGAGCCGAAACGCCGGAAT
GGCGCCGTGGACCCGACGGTGCCCGGACCTTGTGTAATGCGTGCGGCCTG
CACTATGCAAAATTAACTCGGAAGATGGGCGCGAACAAGGCATCCTCGTT
GGGTTCAAATCTGAAACCCAAAACTGCCTTGGACTCCGCATCACCGAGTA
GCCATTAAATTGCCGAGATGAGCACAAGAACCTTGGATTTTTCCAGGCAC
TATGCGGCAAGGGCACACCACACTCAGCGGTCTGGCCCTGTATTGGGTTC
CCTGCCCTCGATCCACGAAGTTGAGGAGATGCTCAATATACAGCGTCGTA
ATCAGGATGCTTTGATTCGCATACGGACAGCAATTTTGAACCAGGAACAT
GCCATGGCAGAACAGATGGCTCAAAGAAAGGCTTTCAAAGCCGGTGGGGT
ACATGAACGATGTCCACCACATGGCAATGTACCAGGAGGAATACAAGGGC
AGTGGCGGGTTCGCTGGCCCCGATTCCAAAAAACGACGAGGGGGAACATC
TACCAGCGCTGGGTTATCTTGGTAAAGACGGACCCAGCTACGCTCCGAAG
CACCCTGGTATAGCAACAGCACATACGTCCTCGCCAACACCACTGTTAAG
TCCAACCACCATGTATCCAGGCCAACCCTTACCTGTCTCCTACACTACAT
CGACTGGTTCTGGTCATTTGCAAGCTGGATACATATCACCCCCGGATTCG
CGCCGCGCGCTTGAGGAGGAGAAGGACAAACAGCAGCAACAGCCTCAGAG
GCAATCGCTTCCGTCAATCCATGAGGCTCTAGGGAATGACAACCATTTAC
CATACCCTGCGCCGACTCCGGCTCCACAGCAAGCTCATCACGCGCCACCT
CATTCCTTACCTCCTAACATTGTCGGGCGGCCAGCCACTGAGGGACCTCC
AGGGCCGCCGAATCCCTTTTCGAGCGGAGCAGCAACTGGCCCTTTCGTGC
GGGAACCTGCTTTTCAGCACCAACTGCAAGCAGAAGCCTCAAGGTCGAGC
TTGACATCGATCAACACCCAAGATTCGAGAAACGCGTCCTTGCAATCACT
TAATTCCGGAAAATCACCTACTCAAAGTGCGAAGACCGGCATTACTTCGA
TTTCCGGATCCCAAGTTGGCTCTGGTTATGAGTACAGCGCGCCTCCTTCT
GCTGGCAGTGTGGCCTCGCCTAATGGTTATGGTGCGTTTTCACAATCATT
CTCATTTCAGCCGCAGCCCCCATCAAATGCACCAGCGTATCCCTCAGCTT
CTTATGATGCTCGAACCTATGGGGGGACATCTTGGAAACCTGGTGTACCA
GAAACTGCTCGCGTGGACGATGTAAAACCGGGTCTAGCGACCCGTCCAGC
CATTGCGGGGCAACCACAAAGCGATTCTGTCAAACGTCACCTGGATATTT
ACGATGTGGAGACATCCCTGAATGAGATGGGGTCGTTAGAGGCTGAGCAC
AGGCACAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0043565 | sequence-specific DNA binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013088 |
| DBxref | InterPro:IPR000679 |
| DBxref | PFAM:PF00320 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:2385298..2387154 - |
|
