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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:2412585..2414837+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002008-T1 ID=CBS51388_002008-T1|Name=CBS51388_002008-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2253bp|location=Sequence derived from alignment at An02:2412585..2414837+ (Aspergillus niger CBS 513.88)
ATGGCGGCCGTGGACTTCTCCAAAGTTTACTCTGCTACTTATAGCAGTGT
GAGTACTCCTTCATCTTGCCCTTTCTGGTATTGCAAAGACCTTGTCCTTT
GAGGCGTGTTGAACAACACCGTGCGCAGGCTTGTGACAGCAATCTAACAC
TGGTGGCTAGGTCCCGGTTTATGAGTTCAAAATCGACGGTGACAGTGTCA
TGCGAAGGCGTTCCGATGACTGGATAAATGCTACACATATTCTGAAAGTT
GCCGGGTTTGACAAGCCTGCGAGGACTCGCATCCTGGAACGCGAGGTGCA
GAAAGGGGTCCATGAAAAGGTGCAAGGTGGCTATGGGAAATATCAAGGTG
AGATTTATTAGCATTCCCAATATTGCATCGCTTTGCCGCGCTACAACTAT
GTGCAGGGACATGGATTCCGCTTCCTGAGGGCCGCATGCTCGCTGAGCGC
AACAACATAATCGACAAGCTAAGGCCGATATTCGACTACGTTGCTGGAGA
TCGCAGTCCACCACCTGCCCCGAAACATACCACTGCAGCCTCGTCGAAGC
CAAGAGCCCCAAAGAATACAAACAAGAGAGTCGCGAATGAAGAGGTTGTC
CCTGCTGTAAAACCGCACCGAAGTATGGCACCGCCCGCCTATCATCCCTA
TGAGCCCTATGAAATGAGCCAAGGATTCGACGAGGATGAATCTTTAGAAC
AGGCAACGCTTGAGTCATCGTCTATGATCGCGGATGATGAGATTATGGCA
ATGTCTCAAAATGGTACATACTCACGAAAGCGCAAGCGTGGGATAAACGA
GGCCCCAGCAATCTCAATTAGTGAACAGGAACACATACTCTATGGTGATC
AGTTGTTGGATTATTTCATGACAGTAGGGGATGCACCGGAAGCGACACGC
ATTCCTCCCCCACAACCGCCTGCCAACTTCCAGGTCGATCGCGCGATTGA
CGAATCTGGAAATACTGCTCTCCATTGGGCATGCGCCATGGGTGACTTGG
AGATTGTGAGAGATCTACTACGGAGAGGGGCAAATATCAAAGCACTATCT
GAACAGGAGGAGACACCCCTCGTGCGTGCCGTGCTGTTCACGAACAATTA
TGAGAAGAGGACGTTTCCACCGCTATTAGATCTTCTCTTGGACACAGTCT
CATTCCGAGACTGGTTCGGCGCCACTCTATTCCACCACATAGCAGAGACT
ACTCGGAGCAAAGGCAAATGGAAGAGCTCGCGATATTACTGCGAAGTATT
GCTAGACAAGCTACGCGTTACGTTCTCGGCTGAGGAAGTTGATTTATTGC
TGTCTTGTCAAGATCAGAATGGGGACACTGCTGCTCTGATTGCTGCTCGA
AATGGCGCGTTTCGTTTGGTTGACCTACTACTCGCTCGGTGTCCGCGATC
TGGTGAGCTTATAAATAATAAAGGCGAGGCAGCCTCAACTATCGTCCGAC
GGGTACCACCTAATGAGCGCGACGTCCCTCTTCCCCCTTCGTCTATCACG
ATGGGTAATGATCAATTAGATCCCGACGTCACAGCACCTGTCACATCAGA
TCACCAGCCTCCCAGCCTTCCGCAGGATTCCTCCCCTGCTACCTCGGCAT
TAATGTCTAAGATTGCCGTCATAATGGCCGAGGCGAACAGGAAACTCACC
GCAGGCTACGGGAGCTCCAAGGCAAACCAGCAAGATTCAGACGATGTTGC
GAATCCGGAGGCACTTTATGCGCAACTTGAATCGGATCGGCAAAAGATTC
AGAAACAGGTTAGTATGCTGGTGGCGAAAGAAGCCGAAGAAGAGTCAATC
GACGCGCAGCTGGACCGCTACGAACAATTAAGACATAGCTACGAATCCGT
CTTGGAGCAAATTCACCAGGCTCGACTCAGAGAGAGGATCGCATCAACGC
CAGTGCCCGAGAAGGAAGATACGGGATCTGACCAGGACCAACAACTTCGC
ACATATCATATGGCCCGTCAATTGTGCTCTGCTCAGAAGGCTCGGCGCGC
AGCCGTGAAGGATCTTGTCCAACAGACGGCCGATGCGGGTGTAAGCACTA
AATTCGATGTCCATCGCAAGTTGGTAGCACTTGCCACCGGCCTCAAAGAG
GAAGATCTAGATCCAATGGCCGCAGAGCTGGCTGAAACACTAGAATTCGA
TCGAATGAATGGGAAGGCTGCAGGAGCCGAGTCACCAGAGCCAGAGGCCA
GGGAGTCGGCCACATTCCCCATTCCTGGTCCGACGGTATCCGTGGATGCC
TGA back to topCoding sequence (CDS) from alignment at An02:2412585..2414837+ >CBS51388_002008-T1 ID=CBS51388_002008-T1|Name=CBS51388_002008-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6246bp|location=Sequence derived from alignment at An02:2412585..2414837+ (Aspergillus niger CBS 513.88)
ATGGCGGCCGTGGACTTCTCCAAAGTTTACTCTGCTACTTATAGCAGTGT
CCCGGTTTATGAGTTCAAAATCGACGGTGACAGTGTCATGCGAAGGCGTT
CCGATGACTGGATAAATGCTACACATATTCTGAAAGTTGCCGGGTTTGAC
AAGCCTGCGAGGACTCGCATCCTGGAACGCGAGGTGCAGAAAGGGGTCCA
TGAAAAGGTGCAAGGTGGCTATGGGAAATATCAAGGGACATGGATTCCGC
TTCCTGAGGGCCGCATGCTCGCTGAGCGCAACAACATAATCGACAAGCTA
AGGCCGATATTCGACTACGTTGCTGGAGATCGCAGTCCACCACCTGCCCC
GAAACATACCACTGCAGCCTCGTCGAAGCCAAGAGCCCCAAAGAATACAA
ACAAGAGAGTCGCGAATGAAGAGGTTGTCCCTGCTGTAAAACCGCACCGA
AGTATGGCACCGCCCGCCTATCATCCCTATGAGCCCTATGAAATGAGCCA
AGGATTCGACGAGGATGAATCTTTAGAACAGGCAACGCTTGAGTCATCGT
CTATGATCGCGGATGATGAGATTATGGCAATGTCTCAAAATGGTACATAC
TCACGAAAGCGCAAGCGTGGGATAAACGAGGCCCCAGCAATCTCAATTAG
TGAACAGGAACACATACTCTATGGTGATCAGTTGTTGGATTATTTCATGA
CAGTAGGGGATGCACCGGAAGCGACACGCATTCCTCCCCCACAACCGCCT
GCCAACTTCCAGGTCGATCGCGCGATTGACGAATCTGGAAATACTGCTCT
CCATTGGGCATGCGCCATGGGTGACTTGGAGATTGTGAGAGATCTACTAC
GGAGAGGGGCAAATATCAAAGCACTATCTGAACAGGAGGAGACACCCCTC
GTGCGTGCCGTGCTGTTCACGAACAATTATGAGAAGAGGACGTTTCCACC
GCTATTAGATCTTCTCTTGGACACAGTCTCATTCCGAGACTGGTTCGGCG
CCACTCTATTCCACCACATAGCAGAGACTACTCGGAGCAAAGGCAAATGG
AAGAGCTCGCGATATTACTGCGAAGTATTGCTAGACAAGCTACGCGTTAC
GTTCTCGGCTGAGGAAGTTGATTTATTGCTGTCTTGTCAAGATCAGAATG
GGGACACTGCTGCTCTGATTGCTGCTCGAAATGGCGCGTTTCGTTTGGTT
GACCTACTACTCGCTCGGTGTCCGCGATCTGGTGAGCTTATAAATAATAA
AGGCGAGGCAGCCTCAACTATCGTCCGACGGGTACCACCTAATGAGCGCG
ACGTCCCTCTTCCCCCTTCGTCTATCACGATGGGTAATGATCAATTAGAT
CCCGACGTCACAGCACCTGTCACATCAGATCACCAGCCTCCCAGCCTTCC
GCAGGATTCCTCCCCTGCTACCTCGGCATTAATGTCTAAGATTGCCGTCA
TAATGGCCGAGGCGAACAGGAAACTCACCGCAGGCTACGGGAGCTCCAAG
GCAAACCAGCAAGATTCAGACGATGTTGCGAATCCGGAGGCACTTTATGC
GCAACTTGAATCGGATCGGCAAAAGATTCAGAAACAGGTTAGTATGCTGG
TGGCGAAAGAAGCCGAAGAAGAGTCAATCGACGCGCAGCTGGACCGCTAC
GAACAATTAAGACATAGCTACGAATCCGTCTTGGAGCAAATTCACCAGGC
TCGACTCAGAGAGAGGATCGCATCAACGCCAGTGCCCGAGAAGGAAGATA
CGGGATCTGACCAGGACCAACAACTTCGCACATATCATATGGCCCGTCAA
TTGTGCTCTGCTCAGAAGGCTCGGCGCGCAGCCGTGAAGGATCTTGTCCA
ACAGACGGCCGATGCGGGTGTAAGCACTAAATTCGATGTCCATCGCAAGT
TGGTAGCACTTGCCACCGGCCTCAAAGAGGAAGATCTAGATCCAATGGCC
GCAGAGCTGGCTGAAACACTAGAATTCGATCGAATGAATGGGAAGGCTGC
AGGAGCCGAGTCACCAGAGCCAGAGGCCAGGGAGTCGGCCACATTCCCCA
TTCCTGGTCCGACGGTATCCGTGGATGCCTGAATGGCGGCCGTGGACTTC
TCCAAAGTTTACTCTGCTACTTATAGCAGTGTCCCGGTTTATGAGTTCAA
AATCGACGGTGACAGTGTCATGCGAAGGCGTTCCGATGACTGGATAAATG
CTACACATATTCTGAAAGTTGCCGGGTTTGACAAGCCTGCGAGGACTCGC
ATCCTGGAACGCGAGGTGCAGAAAGGGGTCCATGAAAAGGTGCAAGGTGG
CTATGGGAAATATCAAGGGACATGGATTCCGCTTCCTGAGGGCCGCATGC
TCGCTGAGCGCAACAACATAATCGACAAGCTAAGGCCGATATTCGACTAC
GTTGCTGGAGATCGCAGTCCACCACCTGCCCCGAAACATACCACTGCAGC
CTCGTCGAAGCCAAGAGCCCCAAAGAATACAAACAAGAGAGTCGCGAATG
AAGAGGTTGTCCCTGCTGTAAAACCGCACCGAAGTATGGCACCGCCCGCC
TATCATCCCTATGAGCCCTATGAAATGAGCCAAGGATTCGACGAGGATGA
ATCTTTAGAACAGGCAACGCTTGAGTCATCGTCTATGATCGCGGATGATG
AGATTATGGCAATGTCTCAAAATGGTACATACTCACGAAAGCGCAAGCGT
GGGATAAACGAGGCCCCAGCAATCTCAATTAGTGAACAGGAACACATACT
CTATGGTGATCAGTTGTTGGATTATTTCATGACAGTAGGGGATGCACCGG
AAGCGACACGCATTCCTCCCCCACAACCGCCTGCCAACTTCCAGGTCGAT
CGCGCGATTGACGAATCTGGAAATACTGCTCTCCATTGGGCATGCGCCAT
GGGTGACTTGGAGATTGTGAGAGATCTACTACGGAGAGGGGCAAATATCA
AAGCACTATCTGAACAGGAGGAGACACCCCTCGTGCGTGCCGTGCTGTTC
ACGAACAATTATGAGAAGAGGACGTTTCCACCGCTATTAGATCTTCTCTT
GGACACAGTCTCATTCCGAGACTGGTTCGGCGCCACTCTATTCCACCACA
TAGCAGAGACTACTCGGAGCAAAGGCAAATGGAAGAGCTCGCGATATTAC
TGCGAAGTATTGCTAGACAAGCTACGCGTTACGTTCTCGGCTGAGGAAGT
TGATTTATTGCTGTCTTGTCAAGATCAGAATGGGGACACTGCTGCTCTGA
TTGCTGCTCGAAATGGCGCGTTTCGTTTGGTTGACCTACTACTCGCTCGG
TGTCCGCGATCTGGTGAGCTTATAAATAATAAAGGCGAGGCAGCCTCAAC
TATCGTCCGACGGGTACCACCTAATGAGCGCGACGTCCCTCTTCCCCCTT
CGTCTATCACGATGGGTAATGATCAATTAGATCCCGACGTCACAGCACCT
GTCACATCAGATCACCAGCCTCCCAGCCTTCCGCAGGATTCCTCCCCTGC
TACCTCGGCATTAATGTCTAAGATTGCCGTCATAATGGCCGAGGCGAACA
GGAAACTCACCGCAGGCTACGGGAGCTCCAAGGCAAACCAGCAAGATTCA
GACGATGTTGCGAATCCGGAGGCACTTTATGCGCAACTTGAATCGGATCG
GCAAAAGATTCAGAAACAGGTTAGTATGCTGGTGGCGAAAGAAGCCGAAG
AAGAGTCAATCGACGCGCAGCTGGACCGCTACGAACAATTAAGACATAGC
TACGAATCCGTCTTGGAGCAAATTCACCAGGCTCGACTCAGAGAGAGGAT
CGCATCAACGCCAGTGCCCGAGAAGGAAGATACGGGATCTGACCAGGACC
AACAACTTCGCACATATCATATGGCCCGTCAATTGTGCTCTGCTCAGAAG
GCTCGGCGCGCAGCCGTGAAGGATCTTGTCCAACAGACGGCCGATGCGGG
TGTAAGCACTAAATTCGATGTCCATCGCAAGTTGGTAGCACTTGCCACCG
GCCTCAAAGAGGAAGATCTAGATCCAATGGCCGCAGAGCTGGCTGAAACA
CTAGAATTCGATCGAATGAATGGGAAGGCTGCAGGAGCCGAGTCACCAGA
GCCAGAGGCCAGGGAGTCGGCCACATTCCCCATTCCTGGTCCGACGGTAT
CCGTGGATGCCTGAATGGCGGCCGTGGACTTCTCCAAAGTTTACTCTGCT
ACTTATAGCAGTGTCCCGGTTTATGAGTTCAAAATCGACGGTGACAGTGT
CATGCGAAGGCGTTCCGATGACTGGATAAATGCTACACATATTCTGAAAG
TTGCCGGGTTTGACAAGCCTGCGAGGACTCGCATCCTGGAACGCGAGGTG
CAGAAAGGGGTCCATGAAAAGGTGCAAGGTGGCTATGGGAAATATCAAGG
GACATGGATTCCGCTTCCTGAGGGCCGCATGCTCGCTGAGCGCAACAACA
TAATCGACAAGCTAAGGCCGATATTCGACTACGTTGCTGGAGATCGCAGT
CCACCACCTGCCCCGAAACATACCACTGCAGCCTCGTCGAAGCCAAGAGC
CCCAAAGAATACAAACAAGAGAGTCGCGAATGAAGAGGTTGTCCCTGCTG
TAAAACCGCACCGAAGTATGGCACCGCCCGCCTATCATCCCTATGAGCCC
TATGAAATGAGCCAAGGATTCGACGAGGATGAATCTTTAGAACAGGCAAC
GCTTGAGTCATCGTCTATGATCGCGGATGATGAGATTATGGCAATGTCTC
AAAATGGTACATACTCACGAAAGCGCAAGCGTGGGATAAACGAGGCCCCA
GCAATCTCAATTAGTGAACAGGAACACATACTCTATGGTGATCAGTTGTT
GGATTATTTCATGACAGTAGGGGATGCACCGGAAGCGACACGCATTCCTC
CCCCACAACCGCCTGCCAACTTCCAGGTCGATCGCGCGATTGACGAATCT
GGAAATACTGCTCTCCATTGGGCATGCGCCATGGGTGACTTGGAGATTGT
GAGAGATCTACTACGGAGAGGGGCAAATATCAAAGCACTATCTGAACAGG
AGGAGACACCCCTCGTGCGTGCCGTGCTGTTCACGAACAATTATGAGAAG
AGGACGTTTCCACCGCTATTAGATCTTCTCTTGGACACAGTCTCATTCCG
AGACTGGTTCGGCGCCACTCTATTCCACCACATAGCAGAGACTACTCGGA
GCAAAGGCAAATGGAAGAGCTCGCGATATTACTGCGAAGTATTGCTAGAC
AAGCTACGCGTTACGTTCTCGGCTGAGGAAGTTGATTTATTGCTGTCTTG
TCAAGATCAGAATGGGGACACTGCTGCTCTGATTGCTGCTCGAAATGGCG
CGTTTCGTTTGGTTGACCTACTACTCGCTCGGTGTCCGCGATCTGGTGAG
CTTATAAATAATAAAGGCGAGGCAGCCTCAACTATCGTCCGACGGGTACC
ACCTAATGAGCGCGACGTCCCTCTTCCCCCTTCGTCTATCACGATGGGTA
ATGATCAATTAGATCCCGACGTCACAGCACCTGTCACATCAGATCACCAG
CCTCCCAGCCTTCCGCAGGATTCCTCCCCTGCTACCTCGGCATTAATGTC
TAAGATTGCCGTCATAATGGCCGAGGCGAACAGGAAACTCACCGCAGGCT
ACGGGAGCTCCAAGGCAAACCAGCAAGATTCAGACGATGTTGCGAATCCG
GAGGCACTTTATGCGCAACTTGAATCGGATCGGCAAAAGATTCAGAAACA
GGTTAGTATGCTGGTGGCGAAAGAAGCCGAAGAAGAGTCAATCGACGCGC
AGCTGGACCGCTACGAACAATTAAGACATAGCTACGAATCCGTCTTGGAG
CAAATTCACCAGGCTCGACTCAGAGAGAGGATCGCATCAACGCCAGTGCC
CGAGAAGGAAGATACGGGATCTGACCAGGACCAACAACTTCGCACATATC
ATATGGCCCGTCAATTGTGCTCTGCTCAGAAGGCTCGGCGCGCAGCCGTG
AAGGATCTTGTCCAACAGACGGCCGATGCGGGTGTAAGCACTAAATTCGA
TGTCCATCGCAAGTTGGTAGCACTTGCCACCGGCCTCAAAGAGGAAGATC
TAGATCCAATGGCCGCAGAGCTGGCTGAAACACTAGAATTCGATCGAATG
AATGGGAAGGCTGCAGGAGCCGAGTCACCAGAGCCAGAGGCCAGGGAGTC
GGCCACATTCCCCATTCCTGGTCCGACGGTATCCGTGGATGCCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR003163 |
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR036887 |
| DBxref | InterPro:IPR002110 |
| DBxref | InterPro:IPR018004 |
| DBxref | PFAM:PF13857 |
| DBxref | PFAM:PF13637 |
| DBxref | PFAM:PF13606 |
| DBxref | PFAM:PF00023 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:2412585..2414837 + |
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