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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:2419836..2421658+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002011-T1 ID=CBS51388_002011-T1|Name=CBS51388_002011-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1823bp|location=Sequence derived from alignment at An02:2419836..2421658+ (Aspergillus niger CBS 513.88)
ATGGAGGTTCATACGTTGGTTTGTGCGCCGGGGAAGCCTCTTCCCCCCGC
ACAACCCCAGCTTTCCGCAGCCGCTGCGCCTGAGAAGAGAAAGCGGGTCC
GTCGATGGCATCACCGAGGATTTACAGGCTGTTCGACATGTCGTCGACGC
CACGTCCGCTGCGACGAAGCATCGCCATCCTGCAAAAACTGTACACGCCT
GGGTCTTGAGTGTGATGGCACTCAAGGTCGCATGACCTTCAAAGTCTACG
GACCGCCGCAAGCGGATTCGTCTCCCGCCACTGCCAAGAAATGCGACAAA
AAGATCAAGATCGAAGGGGACAATAAAGTGAAGCAGGAACCGGCAGGAGA
CGAGAATGAGTCCTTCGAAACCTTAATTGTGTCTCCAACGACAGTGTCCG
ACATGAAGCCTATCAAATATCGCTTCCAAGAACCCATTTCTCCTGCCGAG
TTTTTGTCGTCGTCTCTGGACTGCGTCGAAGGCCGGTATTACACTCATTT
CGTTGACCAGGTCTCTACTTTACTCCTCATCTATGATAATTCGAACAATA
TCAACCCCTACCGAAGATTCTTCCCTGAGCTCGCTCGATCCTCAACGTCA
ATGGCCAGCGCTATGCAAGCCATGGGTGCGTTGCACCTTGCCAATACATC
CAGAGGACAACAGCGAAACAAGCACTTCCAACAAGCCATGAGCAATTATG
GCGAGGTTGTCAAGTCATTCAGAACCCGATATACAGACCCCAATCACACC
GTGCGGCTAACTGATTTCGCCACCTGCCTTCTACTGTCACTGTTTGAGGT
GAGTCCCTTGTTGTTCACTCGGGCCTAGAGAGCACATTGCTAATTTATCA
GATGATGGATTCTCAACATCACAATTGGGCTATCCATCTGAAGGGTGCCC
GAGAAATCTATCGAATACTTTTCACCCCCAATGACGACCCCGACAAAGAA
GCCAAGCGCCTCGCTGAAATCAATCACCCACTTCGACCCTTCCTCGTATC
ACTGCTCTCATACTTAGACGTTGCGGGTGCCTGTGCCACCAGCGAGGGAA
CCGTGGTGGAAGGCAGCTACTGGACAACACACGGAGGTGGCTGGGAATAC
AATCTAGGTACACCAAGCCTATCGGCCGAACAACCCGCTTACAGTCACCA
CCTCGTGGAATTGCGCCAATGTTGGTCTGCTATGATGGAGATTCAAGCAG
CCATCAGTGCCTTTGGAAAAGCGAAACAAGATGGTCTGATGCCCTTCGAA
CAACAAGACCTGGCTTATCACGAGCTATTACAGCGGCTGGTGCAATGGCG
TCTGAACGCACCGCAGGCACTGCAGACTTTAGGCGAACTAGACGATGAGA
GCTTGCAACAATATCCCTACCCCGATGTCCTTGAGTATGCCGGATGTATC
GAAGCATATGAGAAGGCCACCAATATATTCCTACATCGGGTTGGAGCGGC
GGGGCGTCCTGATATACAGCCTCAAAGGGTGCTGTTAGACATGCTTGCTA
CTCGAATTTTGGCGTTGATCGGAAAGCTCGCCAAGGACGTGGGCCAATTG
GCGGTACTATGGCCACTCTTCACAGCTGGCCGAGAATCACGGAACTTGAG
TGAGCAGAAATTTGTGCGGCAGACCATGACTGATCTCCAGCGGTTCGGGT
TCAAGGTATGTCAAACACGGATATCATCAATGATCGAACGAATGCTAACA
GGTTTGCAGAACGTTGACAAGGCCCTCGAGGAACTGGAACAAGCGTGGTT
TAAGCAGCGAGCTTTCCCAGAAGGCTGGATTGATACCATGGACGATATAC
GCTCTTCTATCCTACTCCCTTGA back to topCoding sequence (CDS) from alignment at An02:2419836..2421658+ >CBS51388_002011-T1 ID=CBS51388_002011-T1|Name=CBS51388_002011-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5148bp|location=Sequence derived from alignment at An02:2419836..2421658+ (Aspergillus niger CBS 513.88)
ATGGAGGTTCATACGTTGGTTTGTGCGCCGGGGAAGCCTCTTCCCCCCGC
ACAACCCCAGCTTTCCGCAGCCGCTGCGCCTGAGAAGAGAAAGCGGGTCC
GTCGATGGCATCACCGAGGATTTACAGGCTGTTCGACATGTCGTCGACGC
CACGTCCGCTGCGACGAAGCATCGCCATCCTGCAAAAACTGTACACGCCT
GGGTCTTGAGTGTGATGGCACTCAAGGTCGCATGACCTTCAAAGTCTACG
GACCGCCGCAAGCGGATTCGTCTCCCGCCACTGCCAAGAAATGCGACAAA
AAGATCAAGATCGAAGGGGACAATAAAGTGAAGCAGGAACCGGCAGGAGA
CGAGAATGAGTCCTTCGAAACCTTAATTGTGTCTCCAACGACAGTGTCCG
ACATGAAGCCTATCAAATATCGCTTCCAAGAACCCATTTCTCCTGCCGAG
TTTTTGTCGTCGTCTCTGGACTGCGTCGAAGGCCGGTATTACACTCATTT
CGTTGACCAGGTCTCTACTTTACTCCTCATCTATGATAATTCGAACAATA
TCAACCCCTACCGAAGATTCTTCCCTGAGCTCGCTCGATCCTCAACGTCA
ATGGCCAGCGCTATGCAAGCCATGGGTGCGTTGCACCTTGCCAATACATC
CAGAGGACAACAGCGAAACAAGCACTTCCAACAAGCCATGAGCAATTATG
GCGAGGTTGTCAAGTCATTCAGAACCCGATATACAGACCCCAATCACACC
GTGCGGCTAACTGATTTCGCCACCTGCCTTCTACTGTCACTGTTTGAGAT
GATGGATTCTCAACATCACAATTGGGCTATCCATCTGAAGGGTGCCCGAG
AAATCTATCGAATACTTTTCACCCCCAATGACGACCCCGACAAAGAAGCC
AAGCGCCTCGCTGAAATCAATCACCCACTTCGACCCTTCCTCGTATCACT
GCTCTCATACTTAGACGTTGCGGGTGCCTGTGCCACCAGCGAGGGAACCG
TGGTGGAAGGCAGCTACTGGACAACACACGGAGGTGGCTGGGAATACAAT
CTAGGTACACCAAGCCTATCGGCCGAACAACCCGCTTACAGTCACCACCT
CGTGGAATTGCGCCAATGTTGGTCTGCTATGATGGAGATTCAAGCAGCCA
TCAGTGCCTTTGGAAAAGCGAAACAAGATGGTCTGATGCCCTTCGAACAA
CAAGACCTGGCTTATCACGAGCTATTACAGCGGCTGGTGCAATGGCGTCT
GAACGCACCGCAGGCACTGCAGACTTTAGGCGAACTAGACGATGAGAGCT
TGCAACAATATCCCTACCCCGATGTCCTTGAGTATGCCGGATGTATCGAA
GCATATGAGAAGGCCACCAATATATTCCTACATCGGGTTGGAGCGGCGGG
GCGTCCTGATATACAGCCTCAAAGGGTGCTGTTAGACATGCTTGCTACTC
GAATTTTGGCGTTGATCGGAAAGCTCGCCAAGGACGTGGGCCAATTGGCG
GTACTATGGCCACTCTTCACAGCTGGCCGAGAATCACGGAACTTGAGTGA
GCAGAAATTTGTGCGGCAGACCATGACTGATCTCCAGCGGTTCGGGTTCA
AGAACGTTGACAAGGCCCTCGAGGAACTGGAACAAGCGTGGTTTAAGCAG
CGAGCTTTCCCAGAAGGCTGGATTGATACCATGGACGATATACGCTCTTC
TATCCTACTCCCTTGAATGGAGGTTCATACGTTGGTTTGTGCGCCGGGGA
AGCCTCTTCCCCCCGCACAACCCCAGCTTTCCGCAGCCGCTGCGCCTGAG
AAGAGAAAGCGGGTCCGTCGATGGCATCACCGAGGATTTACAGGCTGTTC
GACATGTCGTCGACGCCACGTCCGCTGCGACGAAGCATCGCCATCCTGCA
AAAACTGTACACGCCTGGGTCTTGAGTGTGATGGCACTCAAGGTCGCATG
ACCTTCAAAGTCTACGGACCGCCGCAAGCGGATTCGTCTCCCGCCACTGC
CAAGAAATGCGACAAAAAGATCAAGATCGAAGGGGACAATAAAGTGAAGC
AGGAACCGGCAGGAGACGAGAATGAGTCCTTCGAAACCTTAATTGTGTCT
CCAACGACAGTGTCCGACATGAAGCCTATCAAATATCGCTTCCAAGAACC
CATTTCTCCTGCCGAGTTTTTGTCGTCGTCTCTGGACTGCGTCGAAGGCC
GGTATTACACTCATTTCGTTGACCAGGTCTCTACTTTACTCCTCATCTAT
GATAATTCGAACAATATCAACCCCTACCGAAGATTCTTCCCTGAGCTCGC
TCGATCCTCAACGTCAATGGCCAGCGCTATGCAAGCCATGGGTGCGTTGC
ACCTTGCCAATACATCCAGAGGACAACAGCGAAACAAGCACTTCCAACAA
GCCATGAGCAATTATGGCGAGGTTGTCAAGTCATTCAGAACCCGATATAC
AGACCCCAATCACACCGTGCGGCTAACTGATTTCGCCACCTGCCTTCTAC
TGTCACTGTTTGAGATGATGGATTCTCAACATCACAATTGGGCTATCCAT
CTGAAGGGTGCCCGAGAAATCTATCGAATACTTTTCACCCCCAATGACGA
CCCCGACAAAGAAGCCAAGCGCCTCGCTGAAATCAATCACCCACTTCGAC
CCTTCCTCGTATCACTGCTCTCATACTTAGACGTTGCGGGTGCCTGTGCC
ACCAGCGAGGGAACCGTGGTGGAAGGCAGCTACTGGACAACACACGGAGG
TGGCTGGGAATACAATCTAGGTACACCAAGCCTATCGGCCGAACAACCCG
CTTACAGTCACCACCTCGTGGAATTGCGCCAATGTTGGTCTGCTATGATG
GAGATTCAAGCAGCCATCAGTGCCTTTGGAAAAGCGAAACAAGATGGTCT
GATGCCCTTCGAACAACAAGACCTGGCTTATCACGAGCTATTACAGCGGC
TGGTGCAATGGCGTCTGAACGCACCGCAGGCACTGCAGACTTTAGGCGAA
CTAGACGATGAGAGCTTGCAACAATATCCCTACCCCGATGTCCTTGAGTA
TGCCGGATGTATCGAAGCATATGAGAAGGCCACCAATATATTCCTACATC
GGGTTGGAGCGGCGGGGCGTCCTGATATACAGCCTCAAAGGGTGCTGTTA
GACATGCTTGCTACTCGAATTTTGGCGTTGATCGGAAAGCTCGCCAAGGA
CGTGGGCCAATTGGCGGTACTATGGCCACTCTTCACAGCTGGCCGAGAAT
CACGGAACTTGAGTGAGCAGAAATTTGTGCGGCAGACCATGACTGATCTC
CAGCGGTTCGGGTTCAAGAACGTTGACAAGGCCCTCGAGGAACTGGAACA
AGCGTGGTTTAAGCAGCGAGCTTTCCCAGAAGGCTGGATTGATACCATGG
ACGATATACGCTCTTCTATCCTACTCCCTTGAATGGAGGTTCATACGTTG
GTTTGTGCGCCGGGGAAGCCTCTTCCCCCCGCACAACCCCAGCTTTCCGC
AGCCGCTGCGCCTGAGAAGAGAAAGCGGGTCCGTCGATGGCATCACCGAG
GATTTACAGGCTGTTCGACATGTCGTCGACGCCACGTCCGCTGCGACGAA
GCATCGCCATCCTGCAAAAACTGTACACGCCTGGGTCTTGAGTGTGATGG
CACTCAAGGTCGCATGACCTTCAAAGTCTACGGACCGCCGCAAGCGGATT
CGTCTCCCGCCACTGCCAAGAAATGCGACAAAAAGATCAAGATCGAAGGG
GACAATAAAGTGAAGCAGGAACCGGCAGGAGACGAGAATGAGTCCTTCGA
AACCTTAATTGTGTCTCCAACGACAGTGTCCGACATGAAGCCTATCAAAT
ATCGCTTCCAAGAACCCATTTCTCCTGCCGAGTTTTTGTCGTCGTCTCTG
GACTGCGTCGAAGGCCGGTATTACACTCATTTCGTTGACCAGGTCTCTAC
TTTACTCCTCATCTATGATAATTCGAACAATATCAACCCCTACCGAAGAT
TCTTCCCTGAGCTCGCTCGATCCTCAACGTCAATGGCCAGCGCTATGCAA
GCCATGGGTGCGTTGCACCTTGCCAATACATCCAGAGGACAACAGCGAAA
CAAGCACTTCCAACAAGCCATGAGCAATTATGGCGAGGTTGTCAAGTCAT
TCAGAACCCGATATACAGACCCCAATCACACCGTGCGGCTAACTGATTTC
GCCACCTGCCTTCTACTGTCACTGTTTGAGATGATGGATTCTCAACATCA
CAATTGGGCTATCCATCTGAAGGGTGCCCGAGAAATCTATCGAATACTTT
TCACCCCCAATGACGACCCCGACAAAGAAGCCAAGCGCCTCGCTGAAATC
AATCACCCACTTCGACCCTTCCTCGTATCACTGCTCTCATACTTAGACGT
TGCGGGTGCCTGTGCCACCAGCGAGGGAACCGTGGTGGAAGGCAGCTACT
GGACAACACACGGAGGTGGCTGGGAATACAATCTAGGTACACCAAGCCTA
TCGGCCGAACAACCCGCTTACAGTCACCACCTCGTGGAATTGCGCCAATG
TTGGTCTGCTATGATGGAGATTCAAGCAGCCATCAGTGCCTTTGGAAAAG
CGAAACAAGATGGTCTGATGCCCTTCGAACAACAAGACCTGGCTTATCAC
GAGCTATTACAGCGGCTGGTGCAATGGCGTCTGAACGCACCGCAGGCACT
GCAGACTTTAGGCGAACTAGACGATGAGAGCTTGCAACAATATCCCTACC
CCGATGTCCTTGAGTATGCCGGATGTATCGAAGCATATGAGAAGGCCACC
AATATATTCCTACATCGGGTTGGAGCGGCGGGGCGTCCTGATATACAGCC
TCAAAGGGTGCTGTTAGACATGCTTGCTACTCGAATTTTGGCGTTGATCG
GAAAGCTCGCCAAGGACGTGGGCCAATTGGCGGTACTATGGCCACTCTTC
ACAGCTGGCCGAGAATCACGGAACTTGAGTGAGCAGAAATTTGTGCGGCA
GACCATGACTGATCTCCAGCGGTTCGGGTTCAAGAACGTTGACAAGGCCC
TCGAGGAACTGGAACAAGCGTGGTTTAAGCAGCGAGCTTTCCCAGAAGGC
TGGATTGATACCATGGACGATATACGCTCTTCTATCCTACTCCCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF11951 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:2419836..2421658 + |
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