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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:2446265..2447411- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002017-T1 ID=CBS51388_002017-T1|Name=CBS51388_002017-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1147bp|location=Sequence derived from alignment at An02:2446265..2447411- (Aspergillus niger CBS 513.88)
ATGGATGTCCTGCAAAGTCTGCCTTTGCCGTCAATTGACCGGCCGTTTGG
TATCCACCTATGGCCTATCTTCGACAAGGCCTTCGAGCTGGTGGTGGGCT
ATCCTGCCAGCGAGTTTCGCTTTGAAGAAGGCGTGACGCCCATGTCTACT
TTCAAGGAAACCGCCATTGCGCTCGTTGCCTACTATGTCATCATCTTTGG
TGGCCGTGAGTTCATGAAGAACAGACCTGCCTTCAAGCTCAACACGCTTT
TCATGATCCACAACCTTTACCTCACCCTGATCAGCGGCACTCTCTTGGCT
CTCTTCATTGAGCAGCTTCTCCCTACTGTCTGGAGACATGGTATCTTCTA
TGCTATCTGTGACCACGACGGTGGATGGACGCGGCCTCTTATCGTTCTGT
ACTATGTGAGTACTCACGGCGCGGGACAAGTTTCGCTACGATCGGATCCG
GTATGCTAACGATATCGCGAATAGCTCAACTATTTGACCAAGTACCTCGA
ACTCATTGACACCGTCTTCCTGTTCCTCAAGAAGAAGCCTCTTACCTTCC
TTCATACCTACCACCACGGTGCCACCGCGCTTCTCTGCTATACCCAGCTT
ATTGGCTTGACTGCGGTTCAGTGGGTTGTCATTGATATCAACCTCCTGGT
GCACGTCGTCATGTACTGGTACTACTTCCAGAGTGCCCGTGGTATCCGTA
TCTGGTGGAAGGAGTGGATCACCCGTCTCCAGATTATTCAGTTCGTCATC
GATCTCGGTTAGTAACCATTTCCAGCTCCGCATCGCTTCAACTAACCAGG
TGACAGGCTTCATCTACTTCGCTTCTTACACCTACTTCTCCTCTACTTAC
TTCCCCTGGGCTCCCAACATGGGCAAGTGCGCCGGCGAGGAGTTTGCCGC
TTTCTCCGGCATGGCTGTCATCAGCTCTTACCTCTTCCTCTTCATCTCCT
TCTACGTCGCTACCTACAAGAAGGCTGCCAAGGCCGGCCGTCCCCGCCGC
AACACTGGCAAGCAGGCTGTTATTGACATGGCCAAGTTCGAGGTCTCTTC
GCCGAACGCTGACGCCAAGGGCAACGCCAAGTCCAACGGAGCTGCTGTGT
CGACCGGCCGTGCCAATGGCCCGGTTACCCGCTCCCGCAAGGCTTAA back to topCoding sequence (CDS) from alignment at An02:2446265..2447411- >CBS51388_002017-T1 ID=CBS51388_002017-T1|Name=CBS51388_002017-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3087bp|location=Sequence derived from alignment at An02:2446265..2447411- (Aspergillus niger CBS 513.88)
GCTTCATCTACTTCGCTTCTTACACCTACTTCTCCTCTACTTACTTCCCC
TGGGCTCCCAACATGGGCAAGTGCGCCGGCGAGGAGTTTGCCGCTTTCTC
CGGCATGGCTGTCATCAGCTCTTACCTCTTCCTCTTCATCTCCTTCTACG
TCGCTACCTACAAGAAGGCTGCCAAGGCCGGCCGTCCCCGCCGCAACACT
GGCAAGCAGGCTGTTATTGACATGGCCAAGTTCGAGGTCTCTTCGCCGAA
CGCTGACGCCAAGGGCAACGCCAAGTCCAACGGAGCTGCTGTGTCGACCG
GCCGTGCCAATGGCCCGGTTACCCGCTCCCGCAAGGCTTAACTCAACTAT
TTGACCAAGTACCTCGAACTCATTGACACCGTCTTCCTGTTCCTCAAGAA
GAAGCCTCTTACCTTCCTTCATACCTACCACCACGGTGCCACCGCGCTTC
TCTGCTATACCCAGCTTATTGGCTTGACTGCGGTTCAGTGGGTTGTCATT
GATATCAACCTCCTGGTGCACGTCGTCATGTACTGGTACTACTTCCAGAG
TGCCCGTGGTATCCGTATCTGGTGGAAGGAGTGGATCACCCGTCTCCAGA
TTATTCAGTTCGTCATCGATCTCGATGGATGTCCTGCAAAGTCTGCCTTT
GCCGTCAATTGACCGGCCGTTTGGTATCCACCTATGGCCTATCTTCGACA
AGGCCTTCGAGCTGGTGGTGGGCTATCCTGCCAGCGAGTTTCGCTTTGAA
GAAGGCGTGACGCCCATGTCTACTTTCAAGGAAACCGCCATTGCGCTCGT
TGCCTACTATGTCATCATCTTTGGTGGCCGTGAGTTCATGAAGAACAGAC
CTGCCTTCAAGCTCAACACGCTTTTCATGATCCACAACCTTTACCTCACC
CTGATCAGCGGCACTCTCTTGGCTCTCTTCATTGAGCAGCTTCTCCCTAC
TGTCTGGAGACATGGTATCTTCTATGCTATCTGTGACCACGACGGTGGAT
GGACGCGGCCTCTTATCGTTCTGTACTATGCTTCATCTACTTCGCTTCTT
ACACCTACTTCTCCTCTACTTACTTCCCCTGGGCTCCCAACATGGGCAAG
TGCGCCGGCGAGGAGTTTGCCGCTTTCTCCGGCATGGCTGTCATCAGCTC
TTACCTCTTCCTCTTCATCTCCTTCTACGTCGCTACCTACAAGAAGGCTG
CCAAGGCCGGCCGTCCCCGCCGCAACACTGGCAAGCAGGCTGTTATTGAC
ATGGCCAAGTTCGAGGTCTCTTCGCCGAACGCTGACGCCAAGGGCAACGC
CAAGTCCAACGGAGCTGCTGTGTCGACCGGCCGTGCCAATGGCCCGGTTA
CCCGCTCCCGCAAGGCTTAACTCAACTATTTGACCAAGTACCTCGAACTC
ATTGACACCGTCTTCCTGTTCCTCAAGAAGAAGCCTCTTACCTTCCTTCA
TACCTACCACCACGGTGCCACCGCGCTTCTCTGCTATACCCAGCTTATTG
GCTTGACTGCGGTTCAGTGGGTTGTCATTGATATCAACCTCCTGGTGCAC
GTCGTCATGTACTGGTACTACTTCCAGAGTGCCCGTGGTATCCGTATCTG
GTGGAAGGAGTGGATCACCCGTCTCCAGATTATTCAGTTCGTCATCGATC
TCGATGGATGTCCTGCAAAGTCTGCCTTTGCCGTCAATTGACCGGCCGTT
TGGTATCCACCTATGGCCTATCTTCGACAAGGCCTTCGAGCTGGTGGTGG
GCTATCCTGCCAGCGAGTTTCGCTTTGAAGAAGGCGTGACGCCCATGTCT
ACTTTCAAGGAAACCGCCATTGCGCTCGTTGCCTACTATGTCATCATCTT
TGGTGGCCGTGAGTTCATGAAGAACAGACCTGCCTTCAAGCTCAACACGC
TTTTCATGATCCACAACCTTTACCTCACCCTGATCAGCGGCACTCTCTTG
GCTCTCTTCATTGAGCAGCTTCTCCCTACTGTCTGGAGACATGGTATCTT
CTATGCTATCTGTGACCACGACGGTGGATGGACGCGGCCTCTTATCGTTC
TGTACTATGCTTCATCTACTTCGCTTCTTACACCTACTTCTCCTCTACTT
ACTTCCCCTGGGCTCCCAACATGGGCAAGTGCGCCGGCGAGGAGTTTGCC
GCTTTCTCCGGCATGGCTGTCATCAGCTCTTACCTCTTCCTCTTCATCTC
CTTCTACGTCGCTACCTACAAGAAGGCTGCCAAGGCCGGCCGTCCCCGCC
GCAACACTGGCAAGCAGGCTGTTATTGACATGGCCAAGTTCGAGGTCTCT
TCGCCGAACGCTGACGCCAAGGGCAACGCCAAGTCCAACGGAGCTGCTGT
GTCGACCGGCCGTGCCAATGGCCCGGTTACCCGCTCCCGCAAGGCTTAAC
TCAACTATTTGACCAAGTACCTCGAACTCATTGACACCGTCTTCCTGTTC
CTCAAGAAGAAGCCTCTTACCTTCCTTCATACCTACCACCACGGTGCCAC
CGCGCTTCTCTGCTATACCCAGCTTATTGGCTTGACTGCGGTTCAGTGGG
TTGTCATTGATATCAACCTCCTGGTGCACGTCGTCATGTACTGGTACTAC
TTCCAGAGTGCCCGTGGTATCCGTATCTGGTGGAAGGAGTGGATCACCCG
TCTCCAGATTATTCAGTTCGTCATCGATCTCGATGGATGTCCTGCAAAGT
CTGCCTTTGCCGTCAATTGACCGGCCGTTTGGTATCCACCTATGGCCTAT
CTTCGACAAGGCCTTCGAGCTGGTGGTGGGCTATCCTGCCAGCGAGTTTC
GCTTTGAAGAAGGCGTGACGCCCATGTCTACTTTCAAGGAAACCGCCATT
GCGCTCGTTGCCTACTATGTCATCATCTTTGGTGGCCGTGAGTTCATGAA
GAACAGACCTGCCTTCAAGCTCAACACGCTTTTCATGATCCACAACCTTT
ACCTCACCCTGATCAGCGGCACTCTCTTGGCTCTCTTCATTGAGCAGCTT
CTCCCTACTGTCTGGAGACATGGTATCTTCTATGCTATCTGTGACCACGA
CGGTGGATGGACGCGGCCTCTTATCGTTCTGTACTAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR030457 |
| DBxref | InterPro:IPR002076 |
| DBxref | PFAM:PF01151 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:2446265..2447411 - |
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