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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:2452835..2455575+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002020-T1 ID=CBS51388_002020-T1|Name=CBS51388_002020-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2741bp|location=Sequence derived from alignment at An02:2452835..2455575+ (Aspergillus niger CBS 513.88)
ATGGCCGTTGCAGCCAATGTGAGCGCGCTGACAGACGAGCTAATTATAGC
CGTTGCGAAGCCCGATAGAAAGGCATTGCACTCAAGCCCTTAATGTAAAG
CAGATCTCATGCTGACGCTCCTGTCCAGGACACTCCACATTTCAGGACCT
TAAAACGTCGGACTGAAGACACTTTCAAGTCGCATGCTTATGCGCGCACG
GATCAATTCGCCGTCGCCAGCCAACTTGAAGGACTGCAGGAGAAATTCCA
AGTCCTTTGTAGGGATGAATTGGCTGATGCTTTGCGTATCCGAGTAACGG
AGCTGCAAGAGCACCAAAGCTCATGGTTCCCCGAAATACTATCATTACTT
CTGCAGCTGGCAGACCGCCCTGCTCAGCGGTCCAGGGTAGACCAGGTGGT
GACAGCAAAGCCCAGAGAGGAAGCGAAATCGCTTGTCTGGGATGAATTGG
ACGCCGCTGGATCGGCATATTGTGGCGAGGATATTTGGGAAGATGTAGAT
TATGGTGCTGATTCCTCTGATGAGGACCTTGCATCGGTGTCCACTGACAG
CTACCATACGCGCAATCAACCAGAAACGTCTGTCACAACAGAGGAAGACT
ACATGATTCCTGACGAAGTCTTCACATCTGGAGAGAACGACGAATTCATT
GAATCGATTGCTAATGCACAATTTTGGAGAAATGAAGAGAGCCCGGCCAC
TGAAAAAGCTGGCCCTGCTTCTCAAATTATTACTGAGCTCCAGGTAGTAA
GGGAGACTGTATTCATGTTGCAAGGTCTACCTACGTCTCTGTTCTGGCGA
TTCGATGGTAATGTTGAAATACATCGAAGATATACCATTGCAGACCTGTC
GAATGAGGCATTCGTCTCATTACTGCGATCACTGAGCTCGACAGGAGCTA
AACTGGATATCCTTAGGCAGTTTTGCAACACTCCACAGGAGATCCCTTAT
ATGCAAACGTTTCATCGGGGCTTGGAGAGCTGTCTTAGAGAGTTCGATTT
GTTTCTATCTAACGTGCAACACCAGTACCTTGCTCAGACATCAATCGTGT
CCATCAGTCTTCTGCAGCTCTCAGAAGATGTTTATCGGGAGTCCAGACTG
CCTTTGCTGTTGTCTGACCTGGTGTCTAGCTTGATGCCAAACACTTCAAA
TACTTCAAATACCGCTACGCAGTGTCTCGACTCACTTTATGATCTCGTGT
GCCTGACACAAGCTGCTGGTGATGATGGCTTATTTAAGGCCCTTGCCAAG
TTATTCTTCTCATGCTTCGAAACCTATGCACATCCCGTCCGTATGTGGAT
GGAGAAAGGCCAGTTGGATGATTCTGCAGCTGGATTTTTCATACGCAACA
GTCAAAGTGACAGTGATCTGCGAACGCTATGGCATGATTGGTACTCACTG
GATGCGATACTCCCGAATTCCCCGAAGTTTATCCAACCTTTTGCGTCCAA
GATCTTCATAACTGGCAAAAGCATGGTTTTTCTGCGACATCTGAATACGT
CTGAGGACGATGAGACTCCGCGGAAGGTCTCCTTAACACTGGACGAAGTT
TTACCGCCAGACTCATCTGCGTTCTGCCTTCCGTTCTCCGTTCTACTCGA
GTTTTCATTCGGAAAATTAGTTGATGAAAACCATGCCTACACTTCGGCTT
TGTTAAGGACGGAGCTTGGCCAGCAATGTGGTTTGTGGACATCCCTTCAA
GCACTGGAGTATATCTATCTCGGCAAAGACATGAGCATTTTCGGACCGAT
TGACAGCAAGATATTCGACCTCATGGACAGAGGGAAAGGTGCTTGGAGTG
ATCGATTCCTGCTTACTGAAGTGGCTCAAAGCGCCTTCGGTGCTTTGCCA
TTCATCGACCCTTCCCGGCTTCTCGTTCGAACACCCAAGGAAGCACACAG
CAATGCAGTAAGCCGCAGCCGCTCAGTCAAGGTGCTAGACGCCATATCGT
TCGACTACATCTTGCCCTGGCCTGTAGCCAATATAATCACGAAAGACACT
CTTATGGGATACCAACGCATCTCCACTTTCCTTATGCAACTCCGCAGAGC
AAAGCAAACGATAGTAAAGCAGCGCTTGCAACACAACAACCAATCTGACA
AAATTCAAGATTCAAGGAACAACACGCTGAGCTATGCTCTCAGACACAAC
ATGCTCTGGTTTCTCAACGCAATCTACAGCCATATGACTGATTTTGTCAT
CTCCGCAGCGACGAAGTCCTTGCGCAGTGACCTTTCTGCTTCTGCCGACG
TGGATGCCATGGTAGCGGCGCATCGCTCATTCATGCACTCCTTGGAGGAA
CAATGCCTTTTATCCACCAACCTGAATGCTCTTCACCAAGCTATCATCAC
AATCCTTGACCTCTGCGTCAGCTTTGCAGACATTCAAAACTCACGCTATG
GTGACCATAGCCTCGATCACGCGCGCACCGCCACCAAGAGCGCAAAATCT
ATGCATCGCAGGAACACACAGCGCTCTGAACCTGACCTGGATGACCCAAG
CGATGAGGACGATGACGATGACTCCGACTTAGACGAAGATAACCTCGCTG
CCTCGTTTCACGAAACCCACTACATGCAACGAGTACGAGATATCAAAGAC
CAGTTCAATCGTCTATTAGCGTTCATTGTGGCTGGTCTAAGGGGTGTAGG
GCGTGTCGACGGCCAACTTAGTTGGGAGATATTGGCCGAGAAGCTCGAGT
GGAGGAAGGCAAGTGGACAGCAGCAGAGTCTTATACTGTAA back to topCoding sequence (CDS) from alignment at An02:2452835..2455575+ >CBS51388_002020-T1 ID=CBS51388_002020-T1|Name=CBS51388_002020-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5262bp|location=Sequence derived from alignment at An02:2452835..2455575+ (Aspergillus niger CBS 513.88)
ATGGCCGTTGCAGCCAATGACACTCCACATTTCAGGACCTTAAAACGTCG
GACTGAAGACACTTTCAAGTCGCATGCTTATGCGCGCACGGATCAATTCG
CCGTCGCCAGCCAACTTGAAGGACTGCAGGAGAAATTCCAAGTCCTTTGT
AGGGATGAATTGGCTGATGCTTTGCGTATCCGAGTAACGGAGCTGCAAGA
GCACCAAAGCTCATGGTTCCCCGAAATACTATCATTACTTCTGCAGCTGG
CAGACCGCCCTGCTCAGCGGTCCAGGGTAGACCAGGTGGTGACAGCAAAG
CCCAGAGAGGAAGCGAAATCGCTTGTCTGGGATGAATTGGACGCCGCTGG
ATCGGCATATTGTGGCGAGGATATTTGGGAAGATGTAGATTATGGTGCTG
ATTCCTCTGATGAGGACCTTGCATCGGTGTCCACTGACAGCTACCATACG
CGCAATCAACCAGAAACGTCTGTCACAACAGAGGAAGACTACATGATTCC
TGACGAAGTCTTCACATCTGGAGAGAACGACGAATTCATTGAATCGATTG
CTAATGCACAATTTTGGAGAAATGAAGAGAGCCCGGCCACTGAAAAAGCT
GGCCCTGCTTCTCAAATTATTACTGAGCTCCAGGTAGTAAGGGAGACTGT
ATTCATGTTGCAAGGTCTACCTACGTCTCTGTTCTGGCGATTCGATGGTA
ATGTTGAAATACATCGAAGATATACCATTGCAGACCTGTCGAATGAGGCA
TTCGTCTCATTACTGCGATCACTGAGCTCGACAGGAGCTAAACTGGATAT
CCTTAGGCAGTTTTGCAACACTCCACAGGAGATCCCTTATATGCAAACGT
TTCATCGGGGCTTGGAGAGCTGTCTTAGAGAGTTCGATTTGTTTCTATCT
AACGTGCAACACCAGTACCTTGCTCAGACATCAATCGTGTCCATCAGTCT
TCTGCAGCTCTCAGAAGATGTTTATCGGGAGTCCAGACTGCCTTTGCTGT
TGTCTGACCTGGTGTCTAGCTTGATGCCAAACACTTCAAATACTTCAAAT
ACCGCTACGCAGTGTCTCGACTCACTTTATGATCTCGTGTGCCTGACACA
AGCTGCTGGTGATGATGGCTTATTTAAGGCCCTTGCCAAGTTATTCTTCT
CATGCTTCGAAACCTATGCACATCCCGTCCGTATGTGGATGGAGAAAGGC
CAGTTGGATGATTCTGCAGCTGGATTTTTCATACGCAACAGTCAAAGTGA
CAGTGATCTGCGAACGCTATGGCATGATTGGTACTCACTGGATGCGATAC
TCCCGAATTCCCCGAAGTTTATCCAACCTTTTGCGTCCAAGATCTTCATA
ACTGGCAAAAGCATGGTTTTTCTGCGACATCTGAATACGTCTGAGGACGA
TGAGACTCCGCGGAAGGTCTCCTTAACACTGGACGAAGTTTTACCGCCAG
ACTCATCTGCGTTCTGCCTTCCGTTCTCCGTTCTACTCGAGTTTTCATTC
GGAAAATTAGTTGATGAAAACCATGCCTACACTTCGGCTTTGTTAAGGAC
GGAGCTTGGCCAGCAATGTGGTTTGTGGACATCCCTTCAAGCACTGGAGT
ATATCTATCTCGGCAAAGACATGAGCATTTTCGGACCGATTGACAGCAAG
ATATTCGACCTCATGGACAGAGGGAAAGGTGCTTGGAGTGATCGATTCCT
GCTTACTGAAGTGGCTCAAAGCGCCTTCGGTGCTTTGCCATTCATCGACC
CTTCCCGGCTTCTCGTTCGAACACCCAAGGAAGCACACAGCAATGCAGTA
AGCCGCAGCCGCTCAGTCAAGGTGCTAGACGCCATATCGTTCGACTACAT
CTTGCCCTGGCCTGTAGCCAATATAATCACGAAAGACACTCTTATGGGAT
ACCAACGCATCTCCACTTTCCTTATGCAACTCCGCAGAGCAAAGCAAACG
ATAGTAAAGCAGCGCTTGCAACACAACAACCAATCTGACAAAATTCAAGA
TTCAAGGAACAACACGCTGAGCTATGCTCTCAGACACAACATGCTCTGGT
TTCTCAACGCAATCTACAGCCATATGACTGATTTTGTCATCTCCGCAGCG
ACGAAGTCCTTGCGCAGTGACCTTTCTGCTTCTGCCGACGTGGATGCCAT
GGTAGCGGCGCATCGCTCATTCATGCACTCCTTGGAGGAACAATGCCTTT
TATCCACCAACCTGAATGCTCTTCACCAAGCTATCATCACAATCCTTGAC
CTCTGCGTCAGCTTTGCAGACATTCAAAACTCACGCTATGGTGACCATAG
CCTCGATCACGCGCGCACCGCCACCAAGAGCGCAAAATCTATGCATCGCA
GGAACACACAGCGCTCTGAACCTGACCTGGATGACCCAAGCGATGAGGAC
GATGACGATGACTCCGACTTAGACGAAGATAACCTCGCTGCCTCGTTTCA
CGAAACCCACTACATGCAACGAGTACGAGATATCAAAGACCAGTTCAATC
GTCTATTAGCGTTCATTGTGGCTGGTCTAAGGGGTGTAGGGCGTGTCGAC
GGCCAACTTAGTTGGGAGATATTGGCCGAGAAGCTCGAGTGGAGGAAGGC
AAGTGGACAGCAGCAGAGTCTTATACTGTAAATGGCCGTTGCAGCCAATG
ACACTCCACATTTCAGGACCTTAAAACGTCGGACTGAAGACACTTTCAAG
TCGCATGCTTATGCGCGCACGGATCAATTCGCCGTCGCCAGCCAACTTGA
AGGACTGCAGGAGAAATTCCAAGTCCTTTGTAGGGATGAATTGGCTGATG
CTTTGCGTATCCGAGTAACGGAGCTGCAAGAGCACCAAAGCTCATGGTTC
CCCGAAATACTATCATTACTTCTGCAGCTGGCAGACCGCCCTGCTCAGCG
GTCCAGGGTAGACCAGGTGGTGACAGCAAAGCCCAGAGAGGAAGCGAAAT
CGCTTGTCTGGGATGAATTGGACGCCGCTGGATCGGCATATTGTGGCGAG
GATATTTGGGAAGATGTAGATTATGGTGCTGATTCCTCTGATGAGGACCT
TGCATCGGTGTCCACTGACAGCTACCATACGCGCAATCAACCAGAAACGT
CTGTCACAACAGAGGAAGACTACATGATTCCTGACGAAGTCTTCACATCT
GGAGAGAACGACGAATTCATTGAATCGATTGCTAATGCACAATTTTGGAG
AAATGAAGAGAGCCCGGCCACTGAAAAAGCTGGCCCTGCTTCTCAAATTA
TTACTGAGCTCCAGGTAGTAAGGGAGACTGTATTCATGTTGCAAGGTCTA
CCTACGTCTCTGTTCTGGCGATTCGATGGTAATGTTGAAATACATCGAAG
ATATACCATTGCAGACCTGTCGAATGAGGCATTCGTCTCATTACTGCGAT
CACTGAGCTCGACAGGAGCTAAACTGGATATCCTTAGGCAGTTTTGCAAC
ACTCCACAGGAGATCCCTTATATGCAAACGTTTCATCGGGGCTTGGAGAG
CTGTCTTAGAGAGTTCGATTTGTTTCTATCTAACGTGCAACACCAGTACC
TTGCTCAGACATCAATCGTGTCCATCAGTCTTCTGCAGCTCTCAGAAGAT
GTTTATCGGGAGTCCAGACTGCCTTTGCTGTTGTCTGACCTGGTGTCTAG
CTTGATGCCAAACACTTCAAATACTTCAAATACCGCTACGCAGTGTCTCG
ACTCACTTTATGATCTCGTGTGCCTGACACAAGCTGCTGGTGATGATGGC
TTATTTAAGGCCCTTGCCAAGTTATTCTTCTCATGCTTCGAAACCTATGC
ACATCCCGTCCGTATGTGGATGGAGAAAGGCCAGTTGGATGATTCTGCAG
CTGGATTTTTCATACGCAACAGTCAAAGTGACAGTGATCTGCGAACGCTA
TGGCATGATTGGTACTCACTGGATGCGATACTCCCGAATTCCCCGAAGTT
TATCCAACCTTTTGCGTCCAAGATCTTCATAACTGGCAAAAGCATGGTTT
TTCTGCGACATCTGAATACGTCTGAGGACGATGAGACTCCGCGGAAGGTC
TCCTTAACACTGGACGAAGTTTTACCGCCAGACTCATCTGCGTTCTGCCT
TCCGTTCTCCGTTCTACTCGAGTTTTCATTCGGAAAATTAGTTGATGAAA
ACCATGCCTACACTTCGGCTTTGTTAAGGACGGAGCTTGGCCAGCAATGT
GGTTTGTGGACATCCCTTCAAGCACTGGAGTATATCTATCTCGGCAAAGA
CATGAGCATTTTCGGACCGATTGACAGCAAGATATTCGACCTCATGGACA
GAGGGAAAGGTGCTTGGAGTGATCGATTCCTGCTTACTGAAGTGGCTCAA
AGCGCCTTCGGTGCTTTGCCATTCATCGACCCTTCCCGGCTTCTCGTTCG
AACACCCAAGGAAGCACACAGCAATGCAGTAAGCCGCAGCCGCTCAGTCA
AGGTGCTAGACGCCATATCGTTCGACTACATCTTGCCCTGGCCTGTAGCC
AATATAATCACGAAAGACACTCTTATGGGATACCAACGCATCTCCACTTT
CCTTATGCAACTCCGCAGAGCAAAGCAAACGATAGTAAAGCAGCGCTTGC
AACACAACAACCAATCTGACAAAATTCAAGATTCAAGGAACAACACGCTG
AGCTATGCTCTCAGACACAACATGCTCTGGTTTCTCAACGCAATCTACAG
CCATATGACTGATTTTGTCATCTCCGCAGCGACGAAGTCCTTGCGCAGTG
ACCTTTCTGCTTCTGCCGACGTGGATGCCATGGTAGCGGCGCATCGCTCA
TTCATGCACTCCTTGGAGGAACAATGCCTTTTATCCACCAACCTGAATGC
TCTTCACCAAGCTATCATCACAATCCTTGACCTCTGCGTCAGCTTTGCAG
ACATTCAAAACTCACGCTATGGTGACCATAGCCTCGATCACGCGCGCACC
GCCACCAAGAGCGCAAAATCTATGCATCGCAGGAACACACAGCGCTCTGA
ACCTGACCTGGATGACCCAAGCGATGAGGACGATGACGATGACTCCGACT
TAGACGAAGATAACCTCGCTGCCTCGTTTCACGAAACCCACTACATGCAA
CGAGTACGAGATATCAAAGACCAGTTCAATCGTCTATTAGCGTTCATTGT
GGCTGGTCTAAGGGGTGTAGGGCGTGTCGACGGCCAACTTAGTTGGGAGA
TATTGGCCGAGAAGCTCGAGTGGAGGAAGGCAAGTGGACAGCAGCAGAGT
CTTATACTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0043015 | gamma-tubulin binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR041470 |
| DBxref | InterPro:IPR040457 |
| DBxref | InterPro:IPR042241 |
| DBxref | PFAM:PF17681 |
| DBxref | PFAM:PF04130 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:2452835..2455575 + |
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