You are here

Home

CBS51388_002026-T1, CBS51388_002026-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002026-T1
Unique NameCBS51388_002026-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:2479666..2480766-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002026-T1 ID=CBS51388_002026-T1|Name=CBS51388_002026-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1101bp|location=Sequence derived from alignment at An02:2479666..2480766- (Aspergillus niger CBS 513.88)
ATGCCAACTGCATTAGTCACTGGAGGCACAGGCTTCATAGCCCTTCACGT
CATCAAGCTGCTCGTCGAGCAGGGACACAAAGTCCACACGACCGTGCGCA
GTCTCAGAAACCCAACAAAATGCAAGCCCATCCTCGACCTACAGTTCCGA
TATCCGGGACAAATCTCCCTATTCGAAGCAGACCTGACGAAAGATGGTTC
CTTTCTTCAGGCTATGGAGGGTTGTCACTTTGTATACCACATTGCATCGC
CGTTCTTAGTCCCCTCGCAAATTAAGGATGGGCTACGCGACTGCGTGGAA
CCAGCTCTCAGAGGAACCAGGAACGTGCTGGAATCCGTAAATCAATGTCA
GTCTGTACAGCGAGTTATATTGACATCATCAGGTAAGCCTTTCCATCTCT
TTTCCCTCTCTTTGGTTGTTAATATAAGATACTTAGTGGCCGCTATGTAC
GGCGATTGCATCGAGATCCATTCCGTCAATAAAGGCACTCTGATGGAATC
TCTATGGAACGAAACCAGCAGCGTCACCAACAACCCATACCACTATTCCA
AGGTAATAGCAGAGCGCGAAGCCTGGAAGATTCACGCCGCCCAGGATCGC
TGGGACCTCGTTGTCCTGAACCCAGGGTTAGTTCTCGGACCATCAATGAC
GCCCGAGTCCGTCTCAGGCAGCCTCTTCATGATCGAAAACATGTTCCGTG
GGAATAACCGCATGGGTGTTCCGGAACTGTATTATCCTGTGGTTGATGTG
CGGGATGTGGCGGAGGCGCATGTCAGGGCTGGGAATATGCCTAACGCTAA
TGGACGATATATTATCGCAGGGAGTGGGGAGACATTCAGCTTGTTGGAAT
TGGCGAATATGGCCCGTTCTGTGCACCGAGATCCGAGGGTCTTGCCTAAT
CGCAATTTGCCCAGAGTAATCGTTTACTTGGCTGGGCCTTTTGTAGGGGT
CTCGAGGGGGTGGATTTCTCGGAACTTGGGCGTGAGGTTTAGTGTTGATA
ATGGGAGGAGTGTGAGGGAGTTGGGGATGGAATATCGGTCTGTGGAGGGC
GCGATTAAGGATCATTATGAGGCTTGGGTGGAAAGAGAAAAGGGTCGATA
A
back to top

Coding sequence (CDS) from alignment at An02:2479666..2480766-

>CBS51388_002026-T1 ID=CBS51388_002026-T1|Name=CBS51388_002026-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2094bp|location=Sequence derived from alignment at An02:2479666..2480766- (Aspergillus niger CBS 513.88)
TGGCCGCTATGTACGGCGATTGCATCGAGATCCATTCCGTCAATAAAGGC
ACTCTGATGGAATCTCTATGGAACGAAACCAGCAGCGTCACCAACAACCC
ATACCACTATTCCAAGGTAATAGCAGAGCGCGAAGCCTGGAAGATTCACG
CCGCCCAGGATCGCTGGGACCTCGTTGTCCTGAACCCAGGGTTAGTTCTC
GGACCATCAATGACGCCCGAGTCCGTCTCAGGCAGCCTCTTCATGATCGA
AAACATGTTCCGTGGGAATAACCGCATGGGTGTTCCGGAACTGTATTATC
CTGTGGTTGATGTGCGGGATGTGGCGGAGGCGCATGTCAGGGCTGGGAAT
ATGCCTAACGCTAATGGACGATATATTATCGCAGGGAGTGGGGAGACATT
CAGCTTGTTGGAATTGGCGAATATGGCCCGTTCTGTGCACCGAGATCCGA
GGGTCTTGCCTAATCGCAATTTGCCCAGAGTAATCGTTTACTTGGCTGGG
CCTTTTGTAGGGGTCTCGAGGGGGTGGATTTCTCGGAACTTGGGCGTGAG
GTTTAGTGTTGATAATGGGAGGAGTGTGAGGGAGTTGGGGATGGAATATC
GGTCTGTGGAGGGCGCGATTAAGGATCATTATGAGGCTTGGGTGGAAAGA
GAAAAGGGTCGATAAATGCCAACTGCATTAGTCACTGGAGGCACAGGCTT
CATAGCCCTTCACGTCATCAAGCTGCTCGTCGAGCAGGGACACAAAGTCC
ACACGACCGTGCGCAGTCTCAGAAACCCAACAAAATGCAAGCCCATCCTC
GACCTACAGTTCCGATATCCGGGACAAATCTCCCTATTCGAAGCAGACCT
GACGAAAGATGGTTCCTTTCTTCAGGCTATGGAGGGTTGTCACTTTGTAT
ACCACATTGCATCGCCGTTCTTAGTCCCCTCGCAAATTAAGGATGGGCTA
CGCGACTGCGTGGAACCAGCTCTCAGAGGAACCAGGAACGTGCTGGAATC
CGTAAATCAATGTCAGTCTGTACAGCGAGTTATATTGACATCATCAGTGG
CCGCTATGTACGGCGATTGCATCGAGATCCATTCCGTCAATAAAGGCACT
CTGATGGAATCTCTATGGAACGAAACCAGCAGCGTCACCAACAACCCATA
CCACTATTCCAAGGTAATAGCAGAGCGCGAAGCCTGGAAGATTCACGCCG
CCCAGGATCGCTGGGACCTCGTTGTCCTGAACCCAGGGTTAGTTCTCGGA
CCATCAATGACGCCCGAGTCCGTCTCAGGCAGCCTCTTCATGATCGAAAA
CATGTTCCGTGGGAATAACCGCATGGGTGTTCCGGAACTGTATTATCCTG
TGGTTGATGTGCGGGATGTGGCGGAGGCGCATGTCAGGGCTGGGAATATG
CCTAACGCTAATGGACGATATATTATCGCAGGGAGTGGGGAGACATTCAG
CTTGTTGGAATTGGCGAATATGGCCCGTTCTGTGCACCGAGATCCGAGGG
TCTTGCCTAATCGCAATTTGCCCAGAGTAATCGTTTACTTGGCTGGGCCT
TTTGTAGGGGTCTCGAGGGGGTGGATTTCTCGGAACTTGGGCGTGAGGTT
TAGTGTTGATAATGGGAGGAGTGTGAGGGAGTTGGGGATGGAATATCGGT
CTGTGGAGGGCGCGATTAAGGATCATTATGAGGCTTGGGTGGAAAGAGAA
AAGGGTCGATAAATGCCAACTGCATTAGTCACTGGAGGCACAGGCTTCAT
AGCCCTTCACGTCATCAAGCTGCTCGTCGAGCAGGGACACAAAGTCCACA
CGACCGTGCGCAGTCTCAGAAACCCAACAAAATGCAAGCCCATCCTCGAC
CTACAGTTCCGATATCCGGGACAAATCTCCCTATTCGAAGCAGACCTGAC
GAAAGATGGTTCCTTTCTTCAGGCTATGGAGGGTTGTCACTTTGTATACC
ACATTGCATCGCCGTTCTTAGTCCCCTCGCAAATTAAGGATGGGCTACGC
GACTGCGTGGAACCAGCTCTCAGAGGAACCAGGAACGTGCTGGAATCCGT
AAATCAATGTCAGTCTGTACAGCGAGTTATATTGACATCATCAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_002026CBS51388_002026Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002026-T1CBS51388_002026-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002026-T1.cdsCBS51388_002026-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002026-T1.exon2CBS51388_002026-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_002026-T1.exon1CBS51388_002026-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR001509
DBxrefPFAM:PF07993
DBxrefPFAM:PF13460
DBxrefPFAM:PF08659
DBxrefPFAM:PF16363
DBxrefPFAM:PF01370
DBxrefPFAM:PF01073
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:2479666..2480766 -
Powered by Drupal