You are here

Home

CBS51388_002028-T1, CBS51388_002028-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002028-T1
Unique NameCBS51388_002028-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:2486123..2487423-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002028-T1 ID=CBS51388_002028-T1|Name=CBS51388_002028-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1301bp|location=Sequence derived from alignment at An02:2486123..2487423- (Aspergillus niger CBS 513.88)
ATGTCCACGAAGATGCGGCCACCGTCAACAAAAGAAGACAGGAATCTCAA
TGATACCACTGCACAGAAGCAGGACCCTATCGAGAGGAGAAGATTACAAA
ATCGGCTTTCACAACGGAATCATCGTGAGTAGTTTGCAAATGTGATACTC
GTGAGCAAGTCATCTAAAGTTAGCAGGGCGCAAGATCCGAGATCGCATTG
CCAAGCTCCAAGAACGCGTTATTGCAAGTGAGCTGCGAGCAGCAGCCAGC
TTGAACGGCTGGGACCATCCCAGCACACTCACACCGTCGCCTGTCGATCG
GATGCCGCCAATTTTCGATACTGAAGGACATCCTTCACCTCCCATCCAGG
ATGTCTCGCCGGCTTTGGGTTCCACGTACTTCCCACAATCAAGAGTCATC
TGTTCATCCTGCAGTAGCGCTTTGGGCTCAATACCAGTCCTATCCTCTCA
GCCATCCTTTCCTTCCATATACGATGCCACGAATGACCTCGATACTACCT
CCCCCTCATCGGCTTTGAGAAATAGTGCCTTCTATCCTCGATCGAATTCT
ATCAATCCCGAAATGCAGAACATGAGCAACATCTACCCCTCTATGGACTC
CAATATTCCTCTCGCAGAACAGTGGAATGGTACAACCCAGTACCCAGGGT
CTTCCTTTTATTACATAGCAACAGGTAAGCCGAAATGGTCGCTGAAGAAT
GGTTTAAATCGTCCAATACTAATTGCTCCCCAGAAGCATATCTTCCCCAT
ATCATGCAAGCCATAAATTCCGGCTCGTCACGTCCCAAGGCAATTATTGT
ACTTCAACAAAACAATCATCCCCCAGGGCTGCCAGCACCCCTGCCTACAT
CCCAGTCATCGCCGCCTGGCGGCAGCGCGGTCGAATTGCCCGCGTCCTCG
AGTCCACTGGGCATGCATGATTCGCAATGCCAATGCCAGGGCCAGAGCTT
AATGACTTCGGGTGAATGGGTAAGCTCAGGGACGTCTGCGGCTACTATTT
GTCCGATACACCAAATGCAGTCTGGAGACAACCTGCAGCTAATGATGCTT
TGAGTGGTCTGATATATATACACGGATGTCCCATTGCCCGCATGGAATAA
TAGATGGAACTCAAGACCGGCACACCGAAGAACTAGCGTTTCCAATTCTC
TCTTGTCTCATTGCACCGAAGCAATAATTGCGAATAGTTGATTCATCTGG
TATTTTGATATAATTAGTGGCATGGTATCCACAAGTTCAGGGCGCAAAGA
TGTTTGCCTGTGCGCGGCAGTCGGAGTTTAGCGCCCGCTGCATTGATCTG
A
back to top

Coding sequence (CDS) from alignment at An02:2486123..2487423-

>CBS51388_002028-T1 ID=CBS51388_002028-T1|Name=CBS51388_002028-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3768bp|location=Sequence derived from alignment at An02:2486123..2487423- (Aspergillus niger CBS 513.88)
TGGCATGGTATCCACAAGTTCAGGGCGCAAAGATGTTTGCCTGTGCGCGG
CAGTCGGAGTTTAGCGCCCGCTGCATTGATCTGAAAGCATATCTTCCCCA
TATCATGCAAGCCATAAATTCCGGCTCGTCACGTCCCAAGGCAATTATTG
TACTTCAACAAAACAATCATCCCCCAGGGCTGCCAGCACCCCTGCCTACA
TCCCAGTCATCGCCGCCTGGCGGCAGCGCGGTCGAATTGCCCGCGTCCTC
GAGTCCACTGGGCATGCATGATTCGCAATGCCAATGCCAGGGCCAGAGCT
TAATGACTTCGGGTGAATGGGGCGCAAGATCCGAGATCGCATTGCCAAGC
TCCAAGAACGCGTTATTGCAAGTGAGCTGCGAGCAGCAGCCAGCTTGAAC
GGCTGGGACCATCCCAGCACACTCACACCGTCGCCTGTCGATCGGATGCC
GCCAATTTTCGATACTGAAGGACATCCTTCACCTCCCATCCAGGATGTCT
CGCCGGCTTTGGGTTCCACGTACTTCCCACAATCAAGAGTCATCTGTTCA
TCCTGCAGTAGCGCTTTGGGCTCAATACCAGTCCTATCCTCTCAGCCATC
CTTTCCTTCCATATACGATGCCACGAATGACCTCGATACTACCTCCCCCT
CATCGGCTTTGAGAAATAGTGCCTTCTATCCTCGATCGAATTCTATCAAT
CCCGAAATGCAGAACATGAGCAACATCTACCCCTCTATGGACTCCAATAT
TCCTCTCGCAGAACAGTGGAATGGTACAACCCAGTACCCAGGGTCTTCCT
TTTATTACATAGCAACAGATGTCCACGAAGATGCGGCCACCGTCAACAAA
AGAAGACAGGAATCTCAATGATACCACTGCACAGAAGCAGGACCCTATCG
AGAGGAGAAGATTACAAAATCGGCTTTCACAACGGAATCATCTGGCATGG
TATCCACAAGTTCAGGGCGCAAAGATGTTTGCCTGTGCGCGGCAGTCGGA
GTTTAGCGCCCGCTGCATTGATCTGAAAGCATATCTTCCCCATATCATGC
AAGCCATAAATTCCGGCTCGTCACGTCCCAAGGCAATTATTGTACTTCAA
CAAAACAATCATCCCCCAGGGCTGCCAGCACCCCTGCCTACATCCCAGTC
ATCGCCGCCTGGCGGCAGCGCGGTCGAATTGCCCGCGTCCTCGAGTCCAC
TGGGCATGCATGATTCGCAATGCCAATGCCAGGGCCAGAGCTTAATGACT
TCGGGTGAATGGGGCGCAAGATCCGAGATCGCATTGCCAAGCTCCAAGAA
CGCGTTATTGCAAGTGAGCTGCGAGCAGCAGCCAGCTTGAACGGCTGGGA
CCATCCCAGCACACTCACACCGTCGCCTGTCGATCGGATGCCGCCAATTT
TCGATACTGAAGGACATCCTTCACCTCCCATCCAGGATGTCTCGCCGGCT
TTGGGTTCCACGTACTTCCCACAATCAAGAGTCATCTGTTCATCCTGCAG
TAGCGCTTTGGGCTCAATACCAGTCCTATCCTCTCAGCCATCCTTTCCTT
CCATATACGATGCCACGAATGACCTCGATACTACCTCCCCCTCATCGGCT
TTGAGAAATAGTGCCTTCTATCCTCGATCGAATTCTATCAATCCCGAAAT
GCAGAACATGAGCAACATCTACCCCTCTATGGACTCCAATATTCCTCTCG
CAGAACAGTGGAATGGTACAACCCAGTACCCAGGGTCTTCCTTTTATTAC
ATAGCAACAGATGTCCACGAAGATGCGGCCACCGTCAACAAAAGAAGACA
GGAATCTCAATGATACCACTGCACAGAAGCAGGACCCTATCGAGAGGAGA
AGATTACAAAATCGGCTTTCACAACGGAATCATCTGGCATGGTATCCACA
AGTTCAGGGCGCAAAGATGTTTGCCTGTGCGCGGCAGTCGGAGTTTAGCG
CCCGCTGCATTGATCTGAAAGCATATCTTCCCCATATCATGCAAGCCATA
AATTCCGGCTCGTCACGTCCCAAGGCAATTATTGTACTTCAACAAAACAA
TCATCCCCCAGGGCTGCCAGCACCCCTGCCTACATCCCAGTCATCGCCGC
CTGGCGGCAGCGCGGTCGAATTGCCCGCGTCCTCGAGTCCACTGGGCATG
CATGATTCGCAATGCCAATGCCAGGGCCAGAGCTTAATGACTTCGGGTGA
ATGGGGCGCAAGATCCGAGATCGCATTGCCAAGCTCCAAGAACGCGTTAT
TGCAAGTGAGCTGCGAGCAGCAGCCAGCTTGAACGGCTGGGACCATCCCA
GCACACTCACACCGTCGCCTGTCGATCGGATGCCGCCAATTTTCGATACT
GAAGGACATCCTTCACCTCCCATCCAGGATGTCTCGCCGGCTTTGGGTTC
CACGTACTTCCCACAATCAAGAGTCATCTGTTCATCCTGCAGTAGCGCTT
TGGGCTCAATACCAGTCCTATCCTCTCAGCCATCCTTTCCTTCCATATAC
GATGCCACGAATGACCTCGATACTACCTCCCCCTCATCGGCTTTGAGAAA
TAGTGCCTTCTATCCTCGATCGAATTCTATCAATCCCGAAATGCAGAACA
TGAGCAACATCTACCCCTCTATGGACTCCAATATTCCTCTCGCAGAACAG
TGGAATGGTACAACCCAGTACCCAGGGTCTTCCTTTTATTACATAGCAAC
AGATGTCCACGAAGATGCGGCCACCGTCAACAAAAGAAGACAGGAATCTC
AATGATACCACTGCACAGAAGCAGGACCCTATCGAGAGGAGAAGATTACA
AAATCGGCTTTCACAACGGAATCATCTGGCATGGTATCCACAAGTTCAGG
GCGCAAAGATGTTTGCCTGTGCGCGGCAGTCGGAGTTTAGCGCCCGCTGC
ATTGATCTGAAAGCATATCTTCCCCATATCATGCAAGCCATAAATTCCGG
CTCGTCACGTCCCAAGGCAATTATTGTACTTCAACAAAACAATCATCCCC
CAGGGCTGCCAGCACCCCTGCCTACATCCCAGTCATCGCCGCCTGGCGGC
AGCGCGGTCGAATTGCCCGCGTCCTCGAGTCCACTGGGCATGCATGATTC
GCAATGCCAATGCCAGGGCCAGAGCTTAATGACTTCGGGTGAATGGGGCG
CAAGATCCGAGATCGCATTGCCAAGCTCCAAGAACGCGTTATTGCAAGTG
AGCTGCGAGCAGCAGCCAGCTTGAACGGCTGGGACCATCCCAGCACACTC
ACACCGTCGCCTGTCGATCGGATGCCGCCAATTTTCGATACTGAAGGACA
TCCTTCACCTCCCATCCAGGATGTCTCGCCGGCTTTGGGTTCCACGTACT
TCCCACAATCAAGAGTCATCTGTTCATCCTGCAGTAGCGCTTTGGGCTCA
ATACCAGTCCTATCCTCTCAGCCATCCTTTCCTTCCATATACGATGCCAC
GAATGACCTCGATACTACCTCCCCCTCATCGGCTTTGAGAAATAGTGCCT
TCTATCCTCGATCGAATTCTATCAATCCCGAAATGCAGAACATGAGCAAC
ATCTACCCCTCTATGGACTCCAATATTCCTCTCGCAGAACAGTGGAATGG
TACAACCCAGTACCCAGGGTCTTCCTTTTATTACATAGCAACAGATGTCC
ACGAAGATGCGGCCACCGTCAACAAAAGAAGACAGGAATCTCAATGATAC
CACTGCACAGAAGCAGGACCCTATCGAGAGGAGAAGATTACAAAATCGGC
TTTCACAACGGAATCATC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_002028CBS51388_002028Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002028-T1CBS51388_002028-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002028-T1.cdsCBS51388_002028-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002028-T1.exon4CBS51388_002028-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_002028-T1.exon3CBS51388_002028-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_002028-T1.exon2CBS51388_002028-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_002028-T1.exon1CBS51388_002028-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR004827
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:2486123..2487423 -
Powered by Drupal