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CBS51388_002057-T1, CBS51388_002057-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002057-T1
Unique NameCBS51388_002057-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:2584282..2585652+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002057-T1 ID=CBS51388_002057-T1|Name=CBS51388_002057-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1371bp|location=Sequence derived from alignment at An02:2584282..2585652+ (Aspergillus niger CBS 513.88)
ATGGCGGACGGAATTGACAGACGCGCTGATGGTAGGACCTCCAAAAGTCC
CCAACAGTTATTCAGGTCGGTATACTGACTGCGCAAAACTAGACCGCATG
GAGTTCAATACCTCGAAGGAGGTCACTGTTGCTCCTACCTTCGAGGACAT
GCACTTGAAGGAGAGCCTTCTCCGTGGTATCTACGCTTATGGCTACGAAT
CTCCGTCTGCAGTCCAGTCCCGTGCCATTGTCCAGATCTGCAAAGGTCGC
GATACCATTGCTCAGGCGCAATCCGGTACTGGTAAGACCGCTACATTCTC
GATTAGTATCCTCCAGGTCATCGATACCGTCGTCCGCGAATCTCAGGGTA
TGTAATATGCGCTCAATTGCATTTTGTTGGTGGTAATCTCACATCTGATA
GCCCTCGTCCTTTCCCCCACTCGTGAACTTGCCACCCAGATTCAGTCCGT
TATTATGGCCCTCGGTGATTACATGAACGTTCAGTGCCATGCTTGTATTG
GAGGCACAAATATTGGAGAGGATATTAGGAAGCTTGACTACGGCCAGCAT
GTCGTTTCGGGCACACCGGGCAGAGTCGCCGATATGATTCGCAGACGTCA
TCTGCGCACCCGTCACATCAAGATGCTGGTTCTTGATGAAGCCGATGAAC
TACTCAACCGTGGATTCCGTGAACAGATTTACGATGTCTACCGCTACCTT
CCTCCTGCCACGCAAGTCGTTGTCGTTTCCGCTACTCTCCCCTATGATGT
GCTTGACATGACCACCAAGTTCATGACAGACCCCGTGCGTGTCCTGGTCA
AGCGTGACGAGTTGACCCTCGAAGGCATCAAGCAGTACTTCATCGCGGTG
GAGAAGGAAGAGTGGAAGTTCGATACCCTTTGCGACCTTTACGATACCTT
GACTATCACCCAGGCGGTCATCTTCTGCAACACCCGTCGCAAGGTCGACT
GGCTTACCGACAAGATGCGCGAAGCCAACTTTACTGTGTCCAGTATGCAC
GGTGAAATGCCCCAGAAGGAGCGTGACAGCATTATGCAGGATTTCCGCCA
GGGTAATTCCCGTGTGCTTATCTCCACTGATGTCTGGGCTCGTGGTATCG
ATGTGCAGCAGGTGTCCCTCGTCATCAACTACGATCTGCCCACTAACCGT
GAAAACTACATCCACCGTATCGGTCGTAGTGGTCGTTTCGGTCGCAAGGG
TGTTGCCATCAACTTCGTCACCAGCGATGACGTGCGCATCCTCCGCGACA
TTGAACTCTACTACTCCACTCAGATTGATGAGATGCCCATGAATGGTATG
TTGACACCATCTATATCACCAAGACCGGATATAACTAACCCATTTTTCCA
GTTGCCGATCTTCTGTCATAA
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Coding sequence (CDS) from alignment at An02:2584282..2585652+

>CBS51388_002057-T1 ID=CBS51388_002057-T1|Name=CBS51388_002057-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4800bp|location=Sequence derived from alignment at An02:2584282..2585652+ (Aspergillus niger CBS 513.88)
ATGGCGGACGGAATTGACAGACGCGCTGATGACCGCATGGAGTTCAATAC
CTCGAAGGAGGTCACTGTTGCTCCTACCTTCGAGGACATGCACTTGAAGG
AGAGCCTTCTCCGTGGTATCTACGCTTATGGCTACGAATCTCCGTCTGCA
GTCCAGTCCCGTGCCATTGTCCAGATCTGCAAAGGTCGCGATACCATTGC
TCAGGCGCAATCCGGTACTGGTAAGACCGCTACATTCTCGATTAGTATCC
TCCAGGTCATCGATACCGTCGTCCGCGAATCTCAGGCCCTCGTCCTTTCC
CCCACTCGTGAACTTGCCACCCAGATTCAGTCCGTTATTATGGCCCTCGG
TGATTACATGAACGTTCAGTGCCATGCTTGTATTGGAGGCACAAATATTG
GAGAGGATATTAGGAAGCTTGACTACGGCCAGCATGTCGTTTCGGGCACA
CCGGGCAGAGTCGCCGATATGATTCGCAGACGTCATCTGCGCACCCGTCA
CATCAAGATGCTGGTTCTTGATGAAGCCGATGAACTACTCAACCGTGGAT
TCCGTGAACAGATTTACGATGTCTACCGCTACCTTCCTCCTGCCACGCAA
GTCGTTGTCGTTTCCGCTACTCTCCCCTATGATGTGCTTGACATGACCAC
CAAGTTCATGACAGACCCCGTGCGTGTCCTGGTCAAGCGTGACGAGTTGA
CCCTCGAAGGCATCAAGCAGTACTTCATCGCGGTGGAGAAGGAAGAGTGG
AAGTTCGATACCCTTTGCGACCTTTACGATACCTTGACTATCACCCAGGC
GGTCATCTTCTGCAACACCCGTCGCAAGGTCGACTGGCTTACCGACAAGA
TGCGCGAAGCCAACTTTACTGTGTCCAGTATGCACGGTGAAATGCCCCAG
AAGGAGCGTGACAGCATTATGCAGGATTTCCGCCAGGGTAATTCCCGTGT
GCTTATCTCCACTGATGTCTGGGCTCGTGGTATCGATGTGCAGCAGGTGT
CCCTCGTCATCAACTACGATCTGCCCACTAACCGTGAAAACTACATCCAC
CGTATCGGTCGTAGTGGTCGTTTCGGTCGCAAGGGTGTTGCCATCAACTT
CGTCACCAGCGATGACGTGCGCATCCTCCGCGACATTGAACTCTACTACT
CCACTCAGATTGATGAGATGCCCATGAATGTTGCCGATCTTCTGTCATAA
ATGGCGGACGGAATTGACAGACGCGCTGATGACCGCATGGAGTTCAATAC
CTCGAAGGAGGTCACTGTTGCTCCTACCTTCGAGGACATGCACTTGAAGG
AGAGCCTTCTCCGTGGTATCTACGCTTATGGCTACGAATCTCCGTCTGCA
GTCCAGTCCCGTGCCATTGTCCAGATCTGCAAAGGTCGCGATACCATTGC
TCAGGCGCAATCCGGTACTGGTAAGACCGCTACATTCTCGATTAGTATCC
TCCAGGTCATCGATACCGTCGTCCGCGAATCTCAGGCCCTCGTCCTTTCC
CCCACTCGTGAACTTGCCACCCAGATTCAGTCCGTTATTATGGCCCTCGG
TGATTACATGAACGTTCAGTGCCATGCTTGTATTGGAGGCACAAATATTG
GAGAGGATATTAGGAAGCTTGACTACGGCCAGCATGTCGTTTCGGGCACA
CCGGGCAGAGTCGCCGATATGATTCGCAGACGTCATCTGCGCACCCGTCA
CATCAAGATGCTGGTTCTTGATGAAGCCGATGAACTACTCAACCGTGGAT
TCCGTGAACAGATTTACGATGTCTACCGCTACCTTCCTCCTGCCACGCAA
GTCGTTGTCGTTTCCGCTACTCTCCCCTATGATGTGCTTGACATGACCAC
CAAGTTCATGACAGACCCCGTGCGTGTCCTGGTCAAGCGTGACGAGTTGA
CCCTCGAAGGCATCAAGCAGTACTTCATCGCGGTGGAGAAGGAAGAGTGG
AAGTTCGATACCCTTTGCGACCTTTACGATACCTTGACTATCACCCAGGC
GGTCATCTTCTGCAACACCCGTCGCAAGGTCGACTGGCTTACCGACAAGA
TGCGCGAAGCCAACTTTACTGTGTCCAGTATGCACGGTGAAATGCCCCAG
AAGGAGCGTGACAGCATTATGCAGGATTTCCGCCAGGGTAATTCCCGTGT
GCTTATCTCCACTGATGTCTGGGCTCGTGGTATCGATGTGCAGCAGGTGT
CCCTCGTCATCAACTACGATCTGCCCACTAACCGTGAAAACTACATCCAC
CGTATCGGTCGTAGTGGTCGTTTCGGTCGCAAGGGTGTTGCCATCAACTT
CGTCACCAGCGATGACGTGCGCATCCTCCGCGACATTGAACTCTACTACT
CCACTCAGATTGATGAGATGCCCATGAATGTTGCCGATCTTCTGTCATAA
ATGGCGGACGGAATTGACAGACGCGCTGATGACCGCATGGAGTTCAATAC
CTCGAAGGAGGTCACTGTTGCTCCTACCTTCGAGGACATGCACTTGAAGG
AGAGCCTTCTCCGTGGTATCTACGCTTATGGCTACGAATCTCCGTCTGCA
GTCCAGTCCCGTGCCATTGTCCAGATCTGCAAAGGTCGCGATACCATTGC
TCAGGCGCAATCCGGTACTGGTAAGACCGCTACATTCTCGATTAGTATCC
TCCAGGTCATCGATACCGTCGTCCGCGAATCTCAGGCCCTCGTCCTTTCC
CCCACTCGTGAACTTGCCACCCAGATTCAGTCCGTTATTATGGCCCTCGG
TGATTACATGAACGTTCAGTGCCATGCTTGTATTGGAGGCACAAATATTG
GAGAGGATATTAGGAAGCTTGACTACGGCCAGCATGTCGTTTCGGGCACA
CCGGGCAGAGTCGCCGATATGATTCGCAGACGTCATCTGCGCACCCGTCA
CATCAAGATGCTGGTTCTTGATGAAGCCGATGAACTACTCAACCGTGGAT
TCCGTGAACAGATTTACGATGTCTACCGCTACCTTCCTCCTGCCACGCAA
GTCGTTGTCGTTTCCGCTACTCTCCCCTATGATGTGCTTGACATGACCAC
CAAGTTCATGACAGACCCCGTGCGTGTCCTGGTCAAGCGTGACGAGTTGA
CCCTCGAAGGCATCAAGCAGTACTTCATCGCGGTGGAGAAGGAAGAGTGG
AAGTTCGATACCCTTTGCGACCTTTACGATACCTTGACTATCACCCAGGC
GGTCATCTTCTGCAACACCCGTCGCAAGGTCGACTGGCTTACCGACAAGA
TGCGCGAAGCCAACTTTACTGTGTCCAGTATGCACGGTGAAATGCCCCAG
AAGGAGCGTGACAGCATTATGCAGGATTTCCGCCAGGGTAATTCCCGTGT
GCTTATCTCCACTGATGTCTGGGCTCGTGGTATCGATGTGCAGCAGGTGT
CCCTCGTCATCAACTACGATCTGCCCACTAACCGTGAAAACTACATCCAC
CGTATCGGTCGTAGTGGTCGTTTCGGTCGCAAGGGTGTTGCCATCAACTT
CGTCACCAGCGATGACGTGCGCATCCTCCGCGACATTGAACTCTACTACT
CCACTCAGATTGATGAGATGCCCATGAATGTTGCCGATCTTCTGTCATAA
ATGGCGGACGGAATTGACAGACGCGCTGATGACCGCATGGAGTTCAATAC
CTCGAAGGAGGTCACTGTTGCTCCTACCTTCGAGGACATGCACTTGAAGG
AGAGCCTTCTCCGTGGTATCTACGCTTATGGCTACGAATCTCCGTCTGCA
GTCCAGTCCCGTGCCATTGTCCAGATCTGCAAAGGTCGCGATACCATTGC
TCAGGCGCAATCCGGTACTGGTAAGACCGCTACATTCTCGATTAGTATCC
TCCAGGTCATCGATACCGTCGTCCGCGAATCTCAGGCCCTCGTCCTTTCC
CCCACTCGTGAACTTGCCACCCAGATTCAGTCCGTTATTATGGCCCTCGG
TGATTACATGAACGTTCAGTGCCATGCTTGTATTGGAGGCACAAATATTG
GAGAGGATATTAGGAAGCTTGACTACGGCCAGCATGTCGTTTCGGGCACA
CCGGGCAGAGTCGCCGATATGATTCGCAGACGTCATCTGCGCACCCGTCA
CATCAAGATGCTGGTTCTTGATGAAGCCGATGAACTACTCAACCGTGGAT
TCCGTGAACAGATTTACGATGTCTACCGCTACCTTCCTCCTGCCACGCAA
GTCGTTGTCGTTTCCGCTACTCTCCCCTATGATGTGCTTGACATGACCAC
CAAGTTCATGACAGACCCCGTGCGTGTCCTGGTCAAGCGTGACGAGTTGA
CCCTCGAAGGCATCAAGCAGTACTTCATCGCGGTGGAGAAGGAAGAGTGG
AAGTTCGATACCCTTTGCGACCTTTACGATACCTTGACTATCACCCAGGC
GGTCATCTTCTGCAACACCCGTCGCAAGGTCGACTGGCTTACCGACAAGA
TGCGCGAAGCCAACTTTACTGTGTCCAGTATGCACGGTGAAATGCCCCAG
AAGGAGCGTGACAGCATTATGCAGGATTTCCGCCAGGGTAATTCCCGTGT
GCTTATCTCCACTGATGTCTGGGCTCGTGGTATCGATGTGCAGCAGGTGT
CCCTCGTCATCAACTACGATCTGCCCACTAACCGTGAAAACTACATCCAC
CGTATCGGTCGTAGTGGTCGTTTCGGTCGCAAGGGTGTTGCCATCAACTT
CGTCACCAGCGATGACGTGCGCATCCTCCGCGACATTGAACTCTACTACT
CCACTCAGATTGATGAGATGCCCATGAATGTTGCCGATCTTCTGTCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
FAL1CBS51388_002057Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002057-T1.exon1CBS51388_002057-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_002057-T1.exon2CBS51388_002057-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_002057-T1.exon3CBS51388_002057-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_002057-T1.exon4CBS51388_002057-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002057-T1.cdsCBS51388_002057-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002057-T1CBS51388_002057-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014014
DBxrefInterPro:IPR000629
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR014001
DBxrefInterPro:IPR001650
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
ProductRNA helicase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:2584282..2585652 +
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