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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:2814591..2815278+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002132-T1 ID=CBS51388_002132-T1|Name=CBS51388_002132-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=688bp|location=Sequence derived from alignment at An02:2814591..2815278+ (Aspergillus niger CBS 513.88)
ATGAGCGTCCAACTCCCCCCCGCCACACACCGCAAGCGCACCCTCCCGCA
AGGCGAACTCGAAGCCGCGTCGACGCTGAAGCTCGGAGCGGACCAGAACA
CGCATACGTTGTCGCTGTCGGAAGCAAGGCTGGTTATCAATAAGGTGTTG
GAGAATAAGCGAAGGGGTGGGAAGAAGTATGAAGAGCCAGAGTGAGTACA
CCTATCTATCTATCTTTTTATCATTCCTGGATTGGGCTATGGTGGAGGGG
GTGGTAGTGTTGGGTTGGTTACAGGAGTGGAAGAGTAGAAGCTAATATAT
TATAATTGTTGGTGTTTAGGAATCTTACGAAGACACTTGATTACTTAGAG
GTGTTTGCCCGGTTCAAGGACGAAGAGAATATCAAGGCTGTGGAGCGGTT
GTTGAATTCGCATACCGAGTTGGAGATGTTTGAGCGGTCGCAGCTTGGTA
TGTATATTTATTTATTCCTATGGGGATTTTCTTTGCTGGGGAAGAGTATT
GTGAATGTGTCACAAGGGGACTCATGGATGAAGTGGTCAGCAGCAGCTAA
CAAGTAACAGGAAGTCTGTGCTGCGATAACGCCGAGGAAGCCAAATCGCT
CATTCCGAGTCTGCAGCATAAGATCTCGGATGGGGATTTGCAGGAGCTGC
TGGATGAGTTGACCAAGTTGCGCAATTTCACTGAGTAG back to topCoding sequence (CDS) from alignment at An02:2814591..2815278+ >CBS51388_002132-T1 ID=CBS51388_002132-T1|Name=CBS51388_002132-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1341bp|location=Sequence derived from alignment at An02:2814591..2815278+ (Aspergillus niger CBS 513.88)
ATGAGCGTCCAACTCCCCCCCGCCACACACCGCAAGCGCACCCTCCCGCA
AGGCGAACTCGAAGCCGCGTCGACGCTGAAGCTCGGAGCGGACCAGAACA
CGCATACGTTGTCGCTGTCGGAAGCAAGGCTGGTTATCAATAAGGTGTTG
GAGAATAAGCGAAGGGGTGGGAAGAAGTATGAAGAGCCAGAGAATCTTAC
GAAGACACTTGATTACTTAGAGGTGTTTGCCCGGTTCAAGGACGAAGAGA
ATATCAAGGCTGTGGAGCGGTTGTTGAATTCGCATACCGAGTTGGAGATG
TTTGAGCGGTCGCAGCTTGGAAGTCTGTGCTGCGATAACGCCGAGGAAGC
CAAATCGCTCATTCCGAGTCTGCAGCATAAGATCTCGGATGGGGATTTGC
AGGAGCTGCTGGATGAGTTGACCAAGTTGCGCAATTTCACTGAGTAGATG
AGCGTCCAACTCCCCCCCGCCACACACCGCAAGCGCACCCTCCCGCAAGG
CGAACTCGAAGCCGCGTCGACGCTGAAGCTCGGAGCGGACCAGAACACGC
ATACGTTGTCGCTGTCGGAAGCAAGGCTGGTTATCAATAAGGTGTTGGAG
AATAAGCGAAGGGGTGGGAAGAAGTATGAAGAGCCAGAGAATCTTACGAA
GACACTTGATTACTTAGAGGTGTTTGCCCGGTTCAAGGACGAAGAGAATA
TCAAGGCTGTGGAGCGGTTGTTGAATTCGCATACCGAGTTGGAGATGTTT
GAGCGGTCGCAGCTTGGAAGTCTGTGCTGCGATAACGCCGAGGAAGCCAA
ATCGCTCATTCCGAGTCTGCAGCATAAGATCTCGGATGGGGATTTGCAGG
AGCTGCTGGATGAGTTGACCAAGTTGCGCAATTTCACTGAGTAGATGAGC
GTCCAACTCCCCCCCGCCACACACCGCAAGCGCACCCTCCCGCAAGGCGA
ACTCGAAGCCGCGTCGACGCTGAAGCTCGGAGCGGACCAGAACACGCATA
CGTTGTCGCTGTCGGAAGCAAGGCTGGTTATCAATAAGGTGTTGGAGAAT
AAGCGAAGGGGTGGGAAGAAGTATGAAGAGCCAGAGAATCTTACGAAGAC
ACTTGATTACTTAGAGGTGTTTGCCCGGTTCAAGGACGAAGAGAATATCA
AGGCTGTGGAGCGGTTGTTGAATTCGCATACCGAGTTGGAGATGTTTGAG
CGGTCGCAGCTTGGAAGTCTGTGCTGCGATAACGCCGAGGAAGCCAAATC
GCTCATTCCGAGTCTGCAGCATAAGATCTCGGATGGGGATTTGCAGGAGC
TGCTGGATGAGTTGACCAAGTTGCGCAATTTCACTGAGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0030880 | RNA polymerase complex |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0000166 | nucleotide binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0044237 | cellular metabolic process |
| GO:0006352 | DNA-templated transcription, initiation |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264ZI5 |
| DBxref | InterPro:IPR010997 |
| DBxref | InterPro:IPR005574 |
| DBxref | InterPro:IPR038324 |
| DBxref | InterPro:IPR006590 |
| DBxref | PFAM:PF03874 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:2814591..2815278 + |
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