CBS51388_002133-T1, CBS51388_002133-T1 (mRNA) Aspergillus niger CBS 513.88

Overview


Name	CBS51388_002133-T1
Unique Name	CBS51388_002133-T1
Type	mRNA
Organism	Aspergillus niger CBS 513.88

Sequences

The following sequences are available for this feature:

mRNA from alignment at An02:2818711..2820993+
coding sequence from alignment at An02:2818711..2820993+

mRNA from alignment at An02:2818711..2820993+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>CBS51388_002133-T1 ID=CBS51388_002133-T1|Name=CBS51388_002133-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2283bp|location=Sequence derived from alignment at An02:2818711..2820993+ (Aspergillus niger CBS 513.88)
ATGGCTGCCGTTATCACTCTCCAGTCGTCCTCGACGACGGGGCCAACAGC
CCCCTCTGCAGCTGCCTTTCAACAGTCGCCTGCCTCTGACCACCACCACC
AACTCCTTCGACCCCGGGTCCAGCAGCAATCCCAACCCCAGCCATCACAC
GCACCTCAACCCGGTTCGATATCCACGCCACAGTCGCCGGCCTCATCCAT
TGGCACCCTTTCCCGTGTGACTGCGTCAGGCCGGGATGCGCCCAGTTGCG
ACGCCTGTGTGCGCAGAAAGAGCCGCTGTGCTATTAACGAAATGATCAAT
AAATGTTATTCGTGCGACTTCCACCGCCAGGACTGCACCTTCACCTTGTC
CGTGACGAGTCGCCCCGGCACGGCGGATGTCCCGTCGAAAAAACGTAAAT
TGGACGACGCCGATGCCGAAGAAGTGGAATCTCCCAAGAGGTATGATTTC
ACCGGGGCGTCCTAAAGGCCGATCTCGGACGTCCCCTGCCCTGAATCTCA
AATCGGAACGCTAACTTGGGTACCCGCTGCCAGGCAATCTACTACTCTTC
CCCCAGCCTCCAACAAACCAGACAGCTCCTCCCGCCCTGCATTGAACAAC
CACCACATCCTCACGCCGGCCTTTTGGTTCCAATCCACTCAACATATCGG
CCTCACCACCGAACTCGAGCCCGCCCTTCTCGAATTCTTGCCCCTGGACC
AGAACAACGAAGGGTGCGTGGCCTCGTCTCGTGTGCGCAAGTTCGGTGAC
GACGGCACCTTCATGCGGGTGGTCAACACCCGTTCTCACGCGGACTCCCC
GCAAACCGCTACGCTCGATGCCATTGAAAGCCTGGTCGCCCCTTATGGCT
CCACCTTGGTGGAGAAGTTCTTCGAGCATGTCCATCCAAGCTTTCCCATC
CTCATGGAGGATAGCTTCCGCCAGTCCTACCGGGCACGGACCGGGCTGAC
GCCGTTGCTATTGTCCGCCGTCTATGTGTTGGCGTTGAAGTTCGTTGACG
TCGGCCCGGCCTCGCAGTCCGTCCGACGCCCGGATGCCGGCCGCCTGGAG
AGCACTGCCCTCAAGCTGCTGACCGAGTCGCTGCCCTATGCGTCGATGTC
GACGGTGCAAGCCGGCCTGCTGCTCATGCAGCGGTCCAACCTCGCCACGG
CGGCCTTGAACGCACAATTGGTGACCGCCGGGTTCGAGCTGGGCCTGCAC
CAAGACTGCTCTAGTTGGCGGATGGAAACGTGGGAGAAGGGTCTCCGGAA
ACGCTTGGCATGGGCACTATATATGCAGGACAAATGGTCCGCTTTGGTGC
ATGGTCGTCCGTCCCATATCGTGTCGTCCAATTGGATGGTCCAGGACCTG
GTGGAACAGGATTTCACCGATGCCTTCTCGGGCACATCCGCCCACGATGA
TGCGCCCGTCGGCCATGGGCCATTGTCCTTCTGCCACATGGTGGCTCTGA
CGACGATATTGTCCGATATTCTGGATCGATTCTATACTCTCCAGGCGATC
GAAGAATTCAGGACGGCCGGAAACAACCGTACCCGCATGATTTTGGAGCG
CGCCAAGCCGGCTCAGATCCGGCTGAAGGAGTGGTTTGGTCGCCTACCCA
CTCAGCTGAAGATGGACTCGGGCGGGGATATCTTCGAGACCGTCAACGAA
GACAATTCACGTAATGGTGCTTTGCACCTGTCCTATTTTGCCACAGAGAT
CACTCTCCACCGCTGTATTGTGCGGTCCCTCTCCCAAGACACCGCCGACG
CCTACCTCTCCCATATCTGTCGGTCTGCCGCCAAGACTCGTCTAATTTCC
GCCATGGACTTTGTCAACCGTCTTCGTCCGATGCATCTGAGATCATTCTG
GCCGGCCGCCGCGCGGACGAACTTTGCCCTCATCGGATCCTTTGGCGTCC
TGCTTCGCGTCACCGCTCCCACCAAGGAAGAGTCGGAGTTCTACCGTCTT
CGACTGTGCGAATACCGGTGGACGCTGAGTGTGAGCAAGAAGGACGCCGA
ATTCCTCGAATTCGCACTCGAGAGTCTCGACAGCGCGACCAACCTCGATC
ACTACGTCCCGGAGAAACCCGGTATTGACGAGCTCATGACCAGTGCCGCC
AAACCCACCATTAATGCTTCCCGCTCGGGCGCGAACGCCCAGCTGGAGGA
CTCGATGGTCGAGCTGGAACAAACAGGCGAGAGCGGACGCGGGGGCACCT
CCTCCGTTATCTCGGGTTTAGCATCTCCTGCAACCTCGATCAGTGACGAC
AGTGTACAAGACGCTTCCATTCCCCCGCTATAG

Coding sequence (CDS) from alignment at An02:2818711..2820993+

>CBS51388_002133-T1 ID=CBS51388_002133-T1|Name=CBS51388_002133-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4380bp|location=Sequence derived from alignment at An02:2818711..2820993+ (Aspergillus niger CBS 513.88)
ATGGCTGCCGTTATCACTCTCCAGTCGTCCTCGACGACGGGGCCAACAGC
CCCCTCTGCAGCTGCCTTTCAACAGTCGCCTGCCTCTGACCACCACCACC
AACTCCTTCGACCCCGGGTCCAGCAGCAATCCCAACCCCAGCCATCACAC
GCACCTCAACCCGGTTCGATATCCACGCCACAGTCGCCGGCCTCATCCAT
TGGCACCCTTTCCCGTGTGACTGCGTCAGGCCGGGATGCGCCCAGTTGCG
ACGCCTGTGTGCGCAGAAAGAGCCGCTGTGCTATTAACGAAATGATCAAT
AAATGTTATTCGTGCGACTTCCACCGCCAGGACTGCACCTTCACCTTGTC
CGTGACGAGTCGCCCCGGCACGGCGGATGTCCCGTCGAAAAAACGTAAAT
TGGACGACGCCGATGCCGAAGAAGTGGAATCTCCCAAGAGGCAATCTACT
ACTCTTCCCCCAGCCTCCAACAAACCAGACAGCTCCTCCCGCCCTGCATT
GAACAACCACCACATCCTCACGCCGGCCTTTTGGTTCCAATCCACTCAAC
ATATCGGCCTCACCACCGAACTCGAGCCCGCCCTTCTCGAATTCTTGCCC
CTGGACCAGAACAACGAAGGGTGCGTGGCCTCGTCTCGTGTGCGCAAGTT
CGGTGACGACGGCACCTTCATGCGGGTGGTCAACACCCGTTCTCACGCGG
ACTCCCCGCAAACCGCTACGCTCGATGCCATTGAAAGCCTGGTCGCCCCT
TATGGCTCCACCTTGGTGGAGAAGTTCTTCGAGCATGTCCATCCAAGCTT
TCCCATCCTCATGGAGGATAGCTTCCGCCAGTCCTACCGGGCACGGACCG
GGCTGACGCCGTTGCTATTGTCCGCCGTCTATGTGTTGGCGTTGAAGTTC
GTTGACGTCGGCCCGGCCTCGCAGTCCGTCCGACGCCCGGATGCCGGCCG
CCTGGAGAGCACTGCCCTCAAGCTGCTGACCGAGTCGCTGCCCTATGCGT
CGATGTCGACGGTGCAAGCCGGCCTGCTGCTCATGCAGCGGTCCAACCTC
GCCACGGCGGCCTTGAACGCACAATTGGTGACCGCCGGGTTCGAGCTGGG
CCTGCACCAAGACTGCTCTAGTTGGCGGATGGAAACGTGGGAGAAGGGTC
TCCGGAAACGCTTGGCATGGGCACTATATATGCAGGACAAATGGTCCGCT
TTGGTGCATGGTCGTCCGTCCCATATCGTGTCGTCCAATTGGATGGTCCA
GGACCTGGTGGAACAGGATTTCACCGATGCCTTCTCGGGCACATCCGCCC
ACGATGATGCGCCCGTCGGCCATGGGCCATTGTCCTTCTGCCACATGGTG
GCTCTGACGACGATATTGTCCGATATTCTGGATCGATTCTATACTCTCCA
GGCGATCGAAGAATTCAGGACGGCCGGAAACAACCGTACCCGCATGATTT
TGGAGCGCGCCAAGCCGGCTCAGATCCGGCTGAAGGAGTGGTTTGGTCGC
CTACCCACTCAGCTGAAGATGGACTCGGGCGGGGATATCTTCGAGACCGT
CAACGAAGACAATTCACGTAATGGTGCTTTGCACCTGTCCTATTTTGCCA
CAGAGATCACTCTCCACCGCTGTATTGTGCGGTCCCTCTCCCAAGACACC
GCCGACGCCTACCTCTCCCATATCTGTCGGTCTGCCGCCAAGACTCGTCT
AATTTCCGCCATGGACTTTGTCAACCGTCTTCGTCCGATGCATCTGAGAT
CATTCTGGCCGGCCGCCGCGCGGACGAACTTTGCCCTCATCGGATCCTTT
GGCGTCCTGCTTCGCGTCACCGCTCCCACCAAGGAAGAGTCGGAGTTCTA
CCGTCTTCGACTGTGCGAATACCGGTGGACGCTGAGTGTGAGCAAGAAGG
ACGCCGAATTCCTCGAATTCGCACTCGAGAGTCTCGACAGCGCGACCAAC
CTCGATCACTACGTCCCGGAGAAACCCGGTATTGACGAGCTCATGACCAG
TGCCGCCAAACCCACCATTAATGCTTCCCGCTCGGGCGCGAACGCCCAGC
TGGAGGACTCGATGGTCGAGCTGGAACAAACAGGCGAGAGCGGACGCGGG
GGCACCTCCTCCGTTATCTCGGGTTTAGCATCTCCTGCAACCTCGATCAG
TGACGACAGTGTACAAGACGCTTCCATTCCCCCGCTATAGATGGCTGCCG
TTATCACTCTCCAGTCGTCCTCGACGACGGGGCCAACAGCCCCCTCTGCA
GCTGCCTTTCAACAGTCGCCTGCCTCTGACCACCACCACCAACTCCTTCG
ACCCCGGGTCCAGCAGCAATCCCAACCCCAGCCATCACACGCACCTCAAC
CCGGTTCGATATCCACGCCACAGTCGCCGGCCTCATCCATTGGCACCCTT
TCCCGTGTGACTGCGTCAGGCCGGGATGCGCCCAGTTGCGACGCCTGTGT
GCGCAGAAAGAGCCGCTGTGCTATTAACGAAATGATCAATAAATGTTATT
CGTGCGACTTCCACCGCCAGGACTGCACCTTCACCTTGTCCGTGACGAGT
CGCCCCGGCACGGCGGATGTCCCGTCGAAAAAACGTAAATTGGACGACGC
CGATGCCGAAGAAGTGGAATCTCCCAAGAGGCAATCTACTACTCTTCCCC
CAGCCTCCAACAAACCAGACAGCTCCTCCCGCCCTGCATTGAACAACCAC
CACATCCTCACGCCGGCCTTTTGGTTCCAATCCACTCAACATATCGGCCT
CACCACCGAACTCGAGCCCGCCCTTCTCGAATTCTTGCCCCTGGACCAGA
ACAACGAAGGGTGCGTGGCCTCGTCTCGTGTGCGCAAGTTCGGTGACGAC
GGCACCTTCATGCGGGTGGTCAACACCCGTTCTCACGCGGACTCCCCGCA
AACCGCTACGCTCGATGCCATTGAAAGCCTGGTCGCCCCTTATGGCTCCA
CCTTGGTGGAGAAGTTCTTCGAGCATGTCCATCCAAGCTTTCCCATCCTC
ATGGAGGATAGCTTCCGCCAGTCCTACCGGGCACGGACCGGGCTGACGCC
GTTGCTATTGTCCGCCGTCTATGTGTTGGCGTTGAAGTTCGTTGACGTCG
GCCCGGCCTCGCAGTCCGTCCGACGCCCGGATGCCGGCCGCCTGGAGAGC
ACTGCCCTCAAGCTGCTGACCGAGTCGCTGCCCTATGCGTCGATGTCGAC
GGTGCAAGCCGGCCTGCTGCTCATGCAGCGGTCCAACCTCGCCACGGCGG
CCTTGAACGCACAATTGGTGACCGCCGGGTTCGAGCTGGGCCTGCACCAA
GACTGCTCTAGTTGGCGGATGGAAACGTGGGAGAAGGGTCTCCGGAAACG
CTTGGCATGGGCACTATATATGCAGGACAAATGGTCCGCTTTGGTGCATG
GTCGTCCGTCCCATATCGTGTCGTCCAATTGGATGGTCCAGGACCTGGTG
GAACAGGATTTCACCGATGCCTTCTCGGGCACATCCGCCCACGATGATGC
GCCCGTCGGCCATGGGCCATTGTCCTTCTGCCACATGGTGGCTCTGACGA
CGATATTGTCCGATATTCTGGATCGATTCTATACTCTCCAGGCGATCGAA
GAATTCAGGACGGCCGGAAACAACCGTACCCGCATGATTTTGGAGCGCGC
CAAGCCGGCTCAGATCCGGCTGAAGGAGTGGTTTGGTCGCCTACCCACTC
AGCTGAAGATGGACTCGGGCGGGGATATCTTCGAGACCGTCAACGAAGAC
AATTCACGTAATGGTGCTTTGCACCTGTCCTATTTTGCCACAGAGATCAC
TCTCCACCGCTGTATTGTGCGGTCCCTCTCCCAAGACACCGCCGACGCCT
ACCTCTCCCATATCTGTCGGTCTGCCGCCAAGACTCGTCTAATTTCCGCC
ATGGACTTTGTCAACCGTCTTCGTCCGATGCATCTGAGATCATTCTGGCC
GGCCGCCGCGCGGACGAACTTTGCCCTCATCGGATCCTTTGGCGTCCTGC
TTCGCGTCACCGCTCCCACCAAGGAAGAGTCGGAGTTCTACCGTCTTCGA
CTGTGCGAATACCGGTGGACGCTGAGTGTGAGCAAGAAGGACGCCGAATT
CCTCGAATTCGCACTCGAGAGTCTCGACAGCGCGACCAACCTCGATCACT
ACGTCCCGGAGAAACCCGGTATTGACGAGCTCATGACCAGTGCCGCCAAA
CCCACCATTAATGCTTCCCGCTCGGGCGCGAACGCCCAGCTGGAGGACTC
GATGGTCGAGCTGGAACAAACAGGCGAGAGCGGACGCGGGGGCACCTCCT
CCGTTATCTCGGGTTTAGCATCTCCTGCAACCTCGATCAGTGACGACAGT
GTACAAGACGCTTCCATTCCCCCGCTATAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus
GO:0042025	host cell nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006351	transcription, DNA-templated
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0008270	zinc ion binding
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
CBS51388_002133	CBS51388_002133	Aspergillus niger CBS 513.88	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_002133-T1.exon1	CBS51388_002133-T1.exon1	Aspergillus niger CBS 513.88	exon
CBS51388_002133-T1.exon2	CBS51388_002133-T1.exon2	Aspergillus niger CBS 513.88	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_002133-T1.cds	CBS51388_002133-T1.cds	Aspergillus niger CBS 513.88	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_002133-T1	CBS51388_002133-T1-protein	Aspergillus niger CBS 513.88	polypeptide

Properties


Property Name	Value
DBxref	InterPro:IPR036864
DBxref	InterPro:IPR007219
DBxref	InterPro:IPR001138
DBxref	PFAM:PF04082
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger CBS 513.88 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
An02	supercontig	An02:2818711..2820993 +

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CBS51388_002133-T1, CBS51388_002133-T1 (mRNA) Aspergillus niger CBS 513.88