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CBS51388_002140-T1, CBS51388_002140-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002140-T1
Unique NameCBS51388_002140-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:2834570..2835669+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002140-T1 ID=CBS51388_002140-T1|Name=CBS51388_002140-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1100bp|location=Sequence derived from alignment at An02:2834570..2835669+ (Aspergillus niger CBS 513.88)
ATGGTATGTTGAGATGCGTTTGGAATCTATGGTATTCGGATTGCTAACTG
ATTGTTCCGTGTGCAGCCTCAGAACGAGTTCGTCTCCCCCACCCACGCCC
CAAAGCTGGGCCCCGACCCGAGCTGTTTTTCCACCGCCGGGGAATCGATA
TGTCGAAGCCACGAACAAAGTATGCTGACGAGGGATTAGGTATATCGAAC
GCTGGCAGAAGCAGCACGGTAAGCGGCTCGATCACGATGAGCGTGTCCGC
AAGCGCCAGGCCCGTGAATCGCACAAGCAGTCCAAGGATGCGCAGAACCT
GCGCGGCCTGAGGGCCAAGCTGTACCAGCAGCAGCGCCATAAGGAGAAGA
TCCAGATGCGTAAGCGCATCAAGGAGCAGGAAGAGAAGAACGTCAAGTCT
TCCGCTCCCGATGAGCCATCCAAGACTCCTCTGCCCCAGTATCTGCTTGA
TCGGTCCCAGGCCACCAACGCCAAGGCCCTGTCCAGCGCCATCAAGGATA
AGCGGAATGAGAAGGCGGCTAAGTTTGCTGTGCCTCTGCCTAAGGTCAAG
GGTATCAGTGAGGAGGAGATGTTCAAGGTCGTCAACACCGGAAAGAAGAC
CCACAAGAAGTCCTGGAAGCGCATGATCACCAAGCCTACTTTCGTTGGTA
GTGACTTCACCAGACGCCCTGTCAAGTACGAACGGTTCATTCGTCCTATG
GGTCTGCGTTACAAGAAGGCCAACGTTACGCAGTATGATTTATCACCTTT
CCCCTCATTCTGTCTGGTATGGGAGTCGATTAACTGACGTAATGGCTTTT
TCTCTTTCCAGCCCCGAACTGGGTGTCACCGTCCAGCTTCCCATCCTTTC
CGTCAAGAAGAACCCCCAGAACCCTCTGTATACCCAACTGGGTGTCTTGA
CCAAGGGTACCATCATTGAAGTGAACGTTTCCGAACTGGGTCTCGTCACC
ACCAGCGGCAAGGTCGTCTGGGGTAAATGGGCGCAGATCACCAACAACCC
TGACATGGACGGCACGGTCAAGTGAGTTATCTCTTTACACTTCATACAAT
CTCCCATAATACTAACATTGTATAATCACAGCGCTGTCCTCCTTGTCTAA
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Coding sequence (CDS) from alignment at An02:2834570..2835669+

>CBS51388_002140-T1 ID=CBS51388_002140-T1|Name=CBS51388_002140-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3930bp|location=Sequence derived from alignment at An02:2834570..2835669+ (Aspergillus niger CBS 513.88)
ATGCCTCAGAACGAGTATATCGAACGCTGGCAGAAGCAGCACGGTAAGCG
GCTCGATCACGATGAGCGTGTCCGCAAGCGCCAGGCCCGTGAATCGCACA
AGCAGTCCAAGGATGCGCAGAACCTGCGCGGCCTGAGGGCCAAGCTGTAC
CAGCAGCAGCGCCATAAGGAGAAGATCCAGATGCGTAAGCGCATCAAGGA
GCAGGAAGAGAAGAACGTCAAGTCTTCCGCTCCCGATGAGCCATCCAAGA
CTCCTCTGCCCCAGTATCTGCTTGATCGGTCCCAGGCCACCAACGCCAAG
GCCCTGTCCAGCGCCATCAAGGATAAGCGGAATGAGAAGGCGGCTAAGTT
TGCTGTGCCTCTGCCTAAGGTCAAGGGTATCAGTGAGGAGGAGATGTTCA
AGGTCGTCAACACCGGAAAGAAGACCCACAAGAAGTCCTGGAAGCGCATG
ATCACCAAGCCTACTTTCGTTGGTAGTGACTTCACCAGACGCCCTGTCAA
GTACGAACGGTTCATTCGTCCTATGGGTCTGCGTTACAAGAAGGCCAACG
TTACGCACCCCGAACTGGGTGTCACCGTCCAGCTTCCCATCCTTTCCGTC
AAGAAGAACCCCCAGAACCCTCTGTATACCCAACTGGGTGTCTTGACCAA
GGGTACCATCATTGAAGTGAACGTTTCCGAACTGGGTCTCGTCACCACCA
GCGGCAAGGTCGTCTGGGGTAAATGGGCGCAGATCACCAACAACCCTGAC
ATGGACGGCACGGTCAACGCTGTCCTCCTTGTCTAAATGCCTCAGAACGA
GTATATCGAACGCTGGCAGAAGCAGCACGGTAAGCGGCTCGATCACGATG
AGCGTGTCCGCAAGCGCCAGGCCCGTGAATCGCACAAGCAGTCCAAGGAT
GCGCAGAACCTGCGCGGCCTGAGGGCCAAGCTGTACCAGCAGCAGCGCCA
TAAGGAGAAGATCCAGATGCGTAAGCGCATCAAGGAGCAGGAAGAGAAGA
ACGTCAAGTCTTCCGCTCCCGATGAGCCATCCAAGACTCCTCTGCCCCAG
TATCTGCTTGATCGGTCCCAGGCCACCAACGCCAAGGCCCTGTCCAGCGC
CATCAAGGATAAGCGGAATGAGAAGGCGGCTAAGTTTGCTGTGCCTCTGC
CTAAGGTCAAGGGTATCAGTGAGGAGGAGATGTTCAAGGTCGTCAACACC
GGAAAGAAGACCCACAAGAAGTCCTGGAAGCGCATGATCACCAAGCCTAC
TTTCGTTGGTAGTGACTTCACCAGACGCCCTGTCAAGTACGAACGGTTCA
TTCGTCCTATGGGTCTGCGTTACAAGAAGGCCAACGTTACGCACCCCGAA
CTGGGTGTCACCGTCCAGCTTCCCATCCTTTCCGTCAAGAAGAACCCCCA
GAACCCTCTGTATACCCAACTGGGTGTCTTGACCAAGGGTACCATCATTG
AAGTGAACGTTTCCGAACTGGGTCTCGTCACCACCAGCGGCAAGGTCGTC
TGGGGTAAATGGGCGCAGATCACCAACAACCCTGACATGGACGGCACGGT
CAACGCTGTCCTCCTTGTCTAAATGCCTCAGAACGAGTATATCGAACGCT
GGCAGAAGCAGCACGGTAAGCGGCTCGATCACGATGAGCGTGTCCGCAAG
CGCCAGGCCCGTGAATCGCACAAGCAGTCCAAGGATGCGCAGAACCTGCG
CGGCCTGAGGGCCAAGCTGTACCAGCAGCAGCGCCATAAGGAGAAGATCC
AGATGCGTAAGCGCATCAAGGAGCAGGAAGAGAAGAACGTCAAGTCTTCC
GCTCCCGATGAGCCATCCAAGACTCCTCTGCCCCAGTATCTGCTTGATCG
GTCCCAGGCCACCAACGCCAAGGCCCTGTCCAGCGCCATCAAGGATAAGC
GGAATGAGAAGGCGGCTAAGTTTGCTGTGCCTCTGCCTAAGGTCAAGGGT
ATCAGTGAGGAGGAGATGTTCAAGGTCGTCAACACCGGAAAGAAGACCCA
CAAGAAGTCCTGGAAGCGCATGATCACCAAGCCTACTTTCGTTGGTAGTG
ACTTCACCAGACGCCCTGTCAAGTACGAACGGTTCATTCGTCCTATGGGT
CTGCGTTACAAGAAGGCCAACGTTACGCACCCCGAACTGGGTGTCACCGT
CCAGCTTCCCATCCTTTCCGTCAAGAAGAACCCCCAGAACCCTCTGTATA
CCCAACTGGGTGTCTTGACCAAGGGTACCATCATTGAAGTGAACGTTTCC
GAACTGGGTCTCGTCACCACCAGCGGCAAGGTCGTCTGGGGTAAATGGGC
GCAGATCACCAACAACCCTGACATGGACGGCACGGTCAACGCTGTCCTCC
TTGTCTAAATGCCTCAGAACGAGTATATCGAACGCTGGCAGAAGCAGCAC
GGTAAGCGGCTCGATCACGATGAGCGTGTCCGCAAGCGCCAGGCCCGTGA
ATCGCACAAGCAGTCCAAGGATGCGCAGAACCTGCGCGGCCTGAGGGCCA
AGCTGTACCAGCAGCAGCGCCATAAGGAGAAGATCCAGATGCGTAAGCGC
ATCAAGGAGCAGGAAGAGAAGAACGTCAAGTCTTCCGCTCCCGATGAGCC
ATCCAAGACTCCTCTGCCCCAGTATCTGCTTGATCGGTCCCAGGCCACCA
ACGCCAAGGCCCTGTCCAGCGCCATCAAGGATAAGCGGAATGAGAAGGCG
GCTAAGTTTGCTGTGCCTCTGCCTAAGGTCAAGGGTATCAGTGAGGAGGA
GATGTTCAAGGTCGTCAACACCGGAAAGAAGACCCACAAGAAGTCCTGGA
AGCGCATGATCACCAAGCCTACTTTCGTTGGTAGTGACTTCACCAGACGC
CCTGTCAAGTACGAACGGTTCATTCGTCCTATGGGTCTGCGTTACAAGAA
GGCCAACGTTACGCACCCCGAACTGGGTGTCACCGTCCAGCTTCCCATCC
TTTCCGTCAAGAAGAACCCCCAGAACCCTCTGTATACCCAACTGGGTGTC
TTGACCAAGGGTACCATCATTGAAGTGAACGTTTCCGAACTGGGTCTCGT
CACCACCAGCGGCAAGGTCGTCTGGGGTAAATGGGCGCAGATCACCAACA
ACCCTGACATGGACGGCACGGTCAACGCTGTCCTCCTTGTCTAAATGCCT
CAGAACGAGTATATCGAACGCTGGCAGAAGCAGCACGGTAAGCGGCTCGA
TCACGATGAGCGTGTCCGCAAGCGCCAGGCCCGTGAATCGCACAAGCAGT
CCAAGGATGCGCAGAACCTGCGCGGCCTGAGGGCCAAGCTGTACCAGCAG
CAGCGCCATAAGGAGAAGATCCAGATGCGTAAGCGCATCAAGGAGCAGGA
AGAGAAGAACGTCAAGTCTTCCGCTCCCGATGAGCCATCCAAGACTCCTC
TGCCCCAGTATCTGCTTGATCGGTCCCAGGCCACCAACGCCAAGGCCCTG
TCCAGCGCCATCAAGGATAAGCGGAATGAGAAGGCGGCTAAGTTTGCTGT
GCCTCTGCCTAAGGTCAAGGGTATCAGTGAGGAGGAGATGTTCAAGGTCG
TCAACACCGGAAAGAAGACCCACAAGAAGTCCTGGAAGCGCATGATCACC
AAGCCTACTTTCGTTGGTAGTGACTTCACCAGACGCCCTGTCAAGTACGA
ACGGTTCATTCGTCCTATGGGTCTGCGTTACAAGAAGGCCAACGTTACGC
ACCCCGAACTGGGTGTCACCGTCCAGCTTCCCATCCTTTCCGTCAAGAAG
AACCCCCAGAACCCTCTGTATACCCAACTGGGTGTCTTGACCAAGGGTAC
CATCATTGAAGTGAACGTTTCCGAACTGGGTCTCGTCACCACCAGCGGCA
AGGTCGTCTGGGGTAAATGGGCGCAGATCACCAACAACCCTGACATGGAC
GGCACGGTCAACGCTGTCCTCCTTGTCTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NSA2CBS51388_002140Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002140-T1CBS51388_002140-T1-proteinAspergillus niger CBS 513.88polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002140-T1.exon1CBS51388_002140-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_002140-T1.exon2CBS51388_002140-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_002140-T1.exon3CBS51388_002140-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_002140-T1.exon4CBS51388_002140-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_002140-T1.exon5CBS51388_002140-T1.exon5Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002140-T1.cdsCBS51388_002140-T1.cdsAspergillus niger CBS 513.88CDS


Properties
Property NameValue
NoteBUSCO:EOG09263ZBF
DBxrefInterPro:IPR039411
DBxrefInterPro:IPR022309
DBxrefPFAM:PF01201
ProductRibosome bioproteinsis protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:2834570..2835669 +
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