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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:2859580..2861222- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002148-T1 ID=CBS51388_002148-T1|Name=CBS51388_002148-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1643bp|location=Sequence derived from alignment at An02:2859580..2861222- (Aspergillus niger CBS 513.88)
ATGGCTTCTAACGACAAGGGCTTGGAGGAGATCCCCGAGGGTATGTGCTA
CTAAAACATCTTTTGCTTTATGCTTTTTTTTTTCTTTTCCTACAAAAGCG
AGTTTGTGGTTTTTATCGATCACTTTGCTGGAGATTGGGGCTCGCTCCCA
AGTCAGCAGAGGAAAGAGAGATAACCGCCACATTCCATCATCGGAACATC
TTTCAAAAGAAACAAGCTGACCAGAAACTTCACCTCAATAGGACAGATCG
AGACTAACTACGATGAGGTTACCGACTCTTTCGACTCCATGGACCTGAAG
CCCGAGCTGCTTCGCGGTATGTGATACAAATTTTATCATCGCCCTGGTGG
GGTCTGTGCCAACATGTTCTGACGACGTCCAGGTGTCTACGCCTACGGTT
TTGAGCGTCCCTCCGCTATCCAGCAGCGTGCCATCAAGCCCATCATTGCC
GGTACGTCTCCCCCCCGCGCGATCGCCTATAATCTATGATGCTAACTAGA
GCATCCCAGGCCACGATGTCATTGCTCAGGCTCAGTCTGGTACCGGAAAG
ACTGCCACTTTCTCCATCTCCGCTCTCCAGAAGATTGACCAGGAGCTCAA
GGCTTGCCAGGCTCTGATTGTCGCTCCCACCCGTGAGTTGGCTCAGCAGA
TCCAGAAGGTCGTTGTTGCCATTGGTGACTTCATGAACATTGAGTGCCAC
GCCTGCATTGGTGGTACCAACGTCCGTGACGACATGAACGCCCTCCGCGC
CGGCCCCCAGGTCGTTGTCGGTACCCCCGGTCGTATCCACGATATGATTG
AGCGCCGTGTCCTCAAGACCGACCAGATGAAGCTCTTCATCCTCGACGAG
GCTGATGAGATGCTTTCTGTAAGTCCATACCAGATCTGGGCCCAGGGAAG
ACGTGCCTTTGCTAATAAATGTGATTAGCGTGGTTTCACCGAGCAAATCT
ACGACATCTTCCAGCTCCTCCCCCAGTCTACCCAGGTCACCCTGCTGTCC
GCTACCATGCCCCAGGATGTCCTTGAGGTCACCACCAAGTTCATGCGTGA
CCCCATCCGTATCCTGGTCAAGAAGCAGGAGCTTACCCTTGAGGGTATCA
AGCAGTTCTACATTGCTGTTGAGAAGGAGGAGTGGAAGCTCGACACCCTC
TCCGATCTCTACGAGACCGTCACCATTACCCAGGCCGTCATCTTCTGTAA
CACCCGCCGCAAGGTCGACTGGCTCACTGACAAGCTCACTGCCCGTGACT
TCACCGTCTCTGCCATGCACGGTGACATGGAGCAGGGCCAGCGTGATGTT
ATCATGAAGGAGTTCCGTTCCGGATCTTCCCGTGTCCTGATCGCCACTGA
CCTTCTGGCCCGTGGTATCGATGTCCAGCAGGTCTCCCTGGTCATCAACT
ACGACCTTCCCGCCAACCGTGAGAACTACATCCACCGTATCGGTCGTGGT
GGTCGTTTCGGTCGTAAGGGTGTTGCCATCAACTTCGTCACCGCTGACGA
TGTCCGCATGATGCGTGAGATTGAGCAGTTCTACAGCACCCAGATCGAGG
AGATGCCCATGAACGTTGCTGGTAAGCTAGCCTTCACCCACACTCTGATT
ATCGTATCTTCCATACTGATTTTTGGTTCCAGACCTCATCTAA back to topCoding sequence (CDS) from alignment at An02:2859580..2861222- >CBS51388_002148-T1 ID=CBS51388_002148-T1|Name=CBS51388_002148-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7182bp|location=Sequence derived from alignment at An02:2859580..2861222- (Aspergillus niger CBS 513.88)
ACCTCATCTAACGTGGTTTCACCGAGCAAATCTACGACATCTTCCAGCTC
CTCCCCCAGTCTACCCAGGTCACCCTGCTGTCCGCTACCATGCCCCAGGA
TGTCCTTGAGGTCACCACCAAGTTCATGCGTGACCCCATCCGTATCCTGG
TCAAGAAGCAGGAGCTTACCCTTGAGGGTATCAAGCAGTTCTACATTGCT
GTTGAGAAGGAGGAGTGGAAGCTCGACACCCTCTCCGATCTCTACGAGAC
CGTCACCATTACCCAGGCCGTCATCTTCTGTAACACCCGCCGCAAGGTCG
ACTGGCTCACTGACAAGCTCACTGCCCGTGACTTCACCGTCTCTGCCATG
CACGGTGACATGGAGCAGGGCCAGCGTGATGTTATCATGAAGGAGTTCCG
TTCCGGATCTTCCCGTGTCCTGATCGCCACTGACCTTCTGGCCCGTGGTA
TCGATGTCCAGCAGGTCTCCCTGGTCATCAACTACGACCTTCCCGCCAAC
CGTGAGAACTACATCCACCGTATCGGTCGTGGTGGTCGTTTCGGTCGTAA
GGGTGTTGCCATCAACTTCGTCACCGCTGACGATGTCCGCATGATGCGTG
AGATTGAGCAGTTCTACAGCACCCAGATCGAGGAGATGCCCATGAACGTT
GCTGGCCACGATGTCATTGCTCAGGCTCAGTCTGGTACCGGAAAGACTGC
CACTTTCTCCATCTCCGCTCTCCAGAAGATTGACCAGGAGCTCAAGGCTT
GCCAGGCTCTGATTGTCGCTCCCACCCGTGAGTTGGCTCAGCAGATCCAG
AAGGTCGTTGTTGCCATTGGTGACTTCATGAACATTGAGTGCCACGCCTG
CATTGGTGGTACCAACGTCCGTGACGACATGAACGCCCTCCGCGCCGGCC
CCCAGGTCGTTGTCGGTACCCCCGGTCGTATCCACGATATGATTGAGCGC
CGTGTCCTCAAGACCGACCAGATGAAGCTCTTCATCCTCGACGAGGCTGA
TGAGATGCTTTCTGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTAT
CCAGCAGCGTGCCATCAAGCCCATCATTGCCGGACAGATCGAGACTAACT
ACGATGAGGTTACCGACTCTTTCGACTCCATGGACCTGAAGCCCGAGCTG
CTTCGCGATGGCTTCTAACGACAAGGGCTTGGAGGAGATCCCCGAGGACC
TCATCTAACGTGGTTTCACCGAGCAAATCTACGACATCTTCCAGCTCCTC
CCCCAGTCTACCCAGGTCACCCTGCTGTCCGCTACCATGCCCCAGGATGT
CCTTGAGGTCACCACCAAGTTCATGCGTGACCCCATCCGTATCCTGGTCA
AGAAGCAGGAGCTTACCCTTGAGGGTATCAAGCAGTTCTACATTGCTGTT
GAGAAGGAGGAGTGGAAGCTCGACACCCTCTCCGATCTCTACGAGACCGT
CACCATTACCCAGGCCGTCATCTTCTGTAACACCCGCCGCAAGGTCGACT
GGCTCACTGACAAGCTCACTGCCCGTGACTTCACCGTCTCTGCCATGCAC
GGTGACATGGAGCAGGGCCAGCGTGATGTTATCATGAAGGAGTTCCGTTC
CGGATCTTCCCGTGTCCTGATCGCCACTGACCTTCTGGCCCGTGGTATCG
ATGTCCAGCAGGTCTCCCTGGTCATCAACTACGACCTTCCCGCCAACCGT
GAGAACTACATCCACCGTATCGGTCGTGGTGGTCGTTTCGGTCGTAAGGG
TGTTGCCATCAACTTCGTCACCGCTGACGATGTCCGCATGATGCGTGAGA
TTGAGCAGTTCTACAGCACCCAGATCGAGGAGATGCCCATGAACGTTGCT
GGCCACGATGTCATTGCTCAGGCTCAGTCTGGTACCGGAAAGACTGCCAC
TTTCTCCATCTCCGCTCTCCAGAAGATTGACCAGGAGCTCAAGGCTTGCC
AGGCTCTGATTGTCGCTCCCACCCGTGAGTTGGCTCAGCAGATCCAGAAG
GTCGTTGTTGCCATTGGTGACTTCATGAACATTGAGTGCCACGCCTGCAT
TGGTGGTACCAACGTCCGTGACGACATGAACGCCCTCCGCGCCGGCCCCC
AGGTCGTTGTCGGTACCCCCGGTCGTATCCACGATATGATTGAGCGCCGT
GTCCTCAAGACCGACCAGATGAAGCTCTTCATCCTCGACGAGGCTGATGA
GATGCTTTCTGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATCCA
GCAGCGTGCCATCAAGCCCATCATTGCCGGACAGATCGAGACTAACTACG
ATGAGGTTACCGACTCTTTCGACTCCATGGACCTGAAGCCCGAGCTGCTT
CGCGATGGCTTCTAACGACAAGGGCTTGGAGGAGATCCCCGAGGACCTCA
TCTAACGTGGTTTCACCGAGCAAATCTACGACATCTTCCAGCTCCTCCCC
CAGTCTACCCAGGTCACCCTGCTGTCCGCTACCATGCCCCAGGATGTCCT
TGAGGTCACCACCAAGTTCATGCGTGACCCCATCCGTATCCTGGTCAAGA
AGCAGGAGCTTACCCTTGAGGGTATCAAGCAGTTCTACATTGCTGTTGAG
AAGGAGGAGTGGAAGCTCGACACCCTCTCCGATCTCTACGAGACCGTCAC
CATTACCCAGGCCGTCATCTTCTGTAACACCCGCCGCAAGGTCGACTGGC
TCACTGACAAGCTCACTGCCCGTGACTTCACCGTCTCTGCCATGCACGGT
GACATGGAGCAGGGCCAGCGTGATGTTATCATGAAGGAGTTCCGTTCCGG
ATCTTCCCGTGTCCTGATCGCCACTGACCTTCTGGCCCGTGGTATCGATG
TCCAGCAGGTCTCCCTGGTCATCAACTACGACCTTCCCGCCAACCGTGAG
AACTACATCCACCGTATCGGTCGTGGTGGTCGTTTCGGTCGTAAGGGTGT
TGCCATCAACTTCGTCACCGCTGACGATGTCCGCATGATGCGTGAGATTG
AGCAGTTCTACAGCACCCAGATCGAGGAGATGCCCATGAACGTTGCTGGC
CACGATGTCATTGCTCAGGCTCAGTCTGGTACCGGAAAGACTGCCACTTT
CTCCATCTCCGCTCTCCAGAAGATTGACCAGGAGCTCAAGGCTTGCCAGG
CTCTGATTGTCGCTCCCACCCGTGAGTTGGCTCAGCAGATCCAGAAGGTC
GTTGTTGCCATTGGTGACTTCATGAACATTGAGTGCCACGCCTGCATTGG
TGGTACCAACGTCCGTGACGACATGAACGCCCTCCGCGCCGGCCCCCAGG
TCGTTGTCGGTACCCCCGGTCGTATCCACGATATGATTGAGCGCCGTGTC
CTCAAGACCGACCAGATGAAGCTCTTCATCCTCGACGAGGCTGATGAGAT
GCTTTCTGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATCCAGCA
GCGTGCCATCAAGCCCATCATTGCCGGACAGATCGAGACTAACTACGATG
AGGTTACCGACTCTTTCGACTCCATGGACCTGAAGCCCGAGCTGCTTCGC
GATGGCTTCTAACGACAAGGGCTTGGAGGAGATCCCCGAGGACCTCATCT
AACGTGGTTTCACCGAGCAAATCTACGACATCTTCCAGCTCCTCCCCCAG
TCTACCCAGGTCACCCTGCTGTCCGCTACCATGCCCCAGGATGTCCTTGA
GGTCACCACCAAGTTCATGCGTGACCCCATCCGTATCCTGGTCAAGAAGC
AGGAGCTTACCCTTGAGGGTATCAAGCAGTTCTACATTGCTGTTGAGAAG
GAGGAGTGGAAGCTCGACACCCTCTCCGATCTCTACGAGACCGTCACCAT
TACCCAGGCCGTCATCTTCTGTAACACCCGCCGCAAGGTCGACTGGCTCA
CTGACAAGCTCACTGCCCGTGACTTCACCGTCTCTGCCATGCACGGTGAC
ATGGAGCAGGGCCAGCGTGATGTTATCATGAAGGAGTTCCGTTCCGGATC
TTCCCGTGTCCTGATCGCCACTGACCTTCTGGCCCGTGGTATCGATGTCC
AGCAGGTCTCCCTGGTCATCAACTACGACCTTCCCGCCAACCGTGAGAAC
TACATCCACCGTATCGGTCGTGGTGGTCGTTTCGGTCGTAAGGGTGTTGC
CATCAACTTCGTCACCGCTGACGATGTCCGCATGATGCGTGAGATTGAGC
AGTTCTACAGCACCCAGATCGAGGAGATGCCCATGAACGTTGCTGGCCAC
GATGTCATTGCTCAGGCTCAGTCTGGTACCGGAAAGACTGCCACTTTCTC
CATCTCCGCTCTCCAGAAGATTGACCAGGAGCTCAAGGCTTGCCAGGCTC
TGATTGTCGCTCCCACCCGTGAGTTGGCTCAGCAGATCCAGAAGGTCGTT
GTTGCCATTGGTGACTTCATGAACATTGAGTGCCACGCCTGCATTGGTGG
TACCAACGTCCGTGACGACATGAACGCCCTCCGCGCCGGCCCCCAGGTCG
TTGTCGGTACCCCCGGTCGTATCCACGATATGATTGAGCGCCGTGTCCTC
AAGACCGACCAGATGAAGCTCTTCATCCTCGACGAGGCTGATGAGATGCT
TTCTGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATCCAGCAGCG
TGCCATCAAGCCCATCATTGCCGGACAGATCGAGACTAACTACGATGAGG
TTACCGACTCTTTCGACTCCATGGACCTGAAGCCCGAGCTGCTTCGCGAT
GGCTTCTAACGACAAGGGCTTGGAGGAGATCCCCGAGGACCTCATCTAAC
GTGGTTTCACCGAGCAAATCTACGACATCTTCCAGCTCCTCCCCCAGTCT
ACCCAGGTCACCCTGCTGTCCGCTACCATGCCCCAGGATGTCCTTGAGGT
CACCACCAAGTTCATGCGTGACCCCATCCGTATCCTGGTCAAGAAGCAGG
AGCTTACCCTTGAGGGTATCAAGCAGTTCTACATTGCTGTTGAGAAGGAG
GAGTGGAAGCTCGACACCCTCTCCGATCTCTACGAGACCGTCACCATTAC
CCAGGCCGTCATCTTCTGTAACACCCGCCGCAAGGTCGACTGGCTCACTG
ACAAGCTCACTGCCCGTGACTTCACCGTCTCTGCCATGCACGGTGACATG
GAGCAGGGCCAGCGTGATGTTATCATGAAGGAGTTCCGTTCCGGATCTTC
CCGTGTCCTGATCGCCACTGACCTTCTGGCCCGTGGTATCGATGTCCAGC
AGGTCTCCCTGGTCATCAACTACGACCTTCCCGCCAACCGTGAGAACTAC
ATCCACCGTATCGGTCGTGGTGGTCGTTTCGGTCGTAAGGGTGTTGCCAT
CAACTTCGTCACCGCTGACGATGTCCGCATGATGCGTGAGATTGAGCAGT
TCTACAGCACCCAGATCGAGGAGATGCCCATGAACGTTGCTGGCCACGAT
GTCATTGCTCAGGCTCAGTCTGGTACCGGAAAGACTGCCACTTTCTCCAT
CTCCGCTCTCCAGAAGATTGACCAGGAGCTCAAGGCTTGCCAGGCTCTGA
TTGTCGCTCCCACCCGTGAGTTGGCTCAGCAGATCCAGAAGGTCGTTGTT
GCCATTGGTGACTTCATGAACATTGAGTGCCACGCCTGCATTGGTGGTAC
CAACGTCCGTGACGACATGAACGCCCTCCGCGCCGGCCCCCAGGTCGTTG
TCGGTACCCCCGGTCGTATCCACGATATGATTGAGCGCCGTGTCCTCAAG
ACCGACCAGATGAAGCTCTTCATCCTCGACGAGGCTGATGAGATGCTTTC
TGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATCCAGCAGCGTGC
CATCAAGCCCATCATTGCCGGACAGATCGAGACTAACTACGATGAGGTTA
CCGACTCTTTCGACTCCATGGACCTGAAGCCCGAGCTGCTTCGCGATGGC
TTCTAACGACAAGGGCTTGGAGGAGATCCCCGAGGACCTCATCTAACGTG
GTTTCACCGAGCAAATCTACGACATCTTCCAGCTCCTCCCCCAGTCTACC
CAGGTCACCCTGCTGTCCGCTACCATGCCCCAGGATGTCCTTGAGGTCAC
CACCAAGTTCATGCGTGACCCCATCCGTATCCTGGTCAAGAAGCAGGAGC
TTACCCTTGAGGGTATCAAGCAGTTCTACATTGCTGTTGAGAAGGAGGAG
TGGAAGCTCGACACCCTCTCCGATCTCTACGAGACCGTCACCATTACCCA
GGCCGTCATCTTCTGTAACACCCGCCGCAAGGTCGACTGGCTCACTGACA
AGCTCACTGCCCGTGACTTCACCGTCTCTGCCATGCACGGTGACATGGAG
CAGGGCCAGCGTGATGTTATCATGAAGGAGTTCCGTTCCGGATCTTCCCG
TGTCCTGATCGCCACTGACCTTCTGGCCCGTGGTATCGATGTCCAGCAGG
TCTCCCTGGTCATCAACTACGACCTTCCCGCCAACCGTGAGAACTACATC
CACCGTATCGGTCGTGGTGGTCGTTTCGGTCGTAAGGGTGTTGCCATCAA
CTTCGTCACCGCTGACGATGTCCGCATGATGCGTGAGATTGAGCAGTTCT
ACAGCACCCAGATCGAGGAGATGCCCATGAACGTTGCTGGCCACGATGTC
ATTGCTCAGGCTCAGTCTGGTACCGGAAAGACTGCCACTTTCTCCATCTC
CGCTCTCCAGAAGATTGACCAGGAGCTCAAGGCTTGCCAGGCTCTGATTG
TCGCTCCCACCCGTGAGTTGGCTCAGCAGATCCAGAAGGTCGTTGTTGCC
ATTGGTGACTTCATGAACATTGAGTGCCACGCCTGCATTGGTGGTACCAA
CGTCCGTGACGACATGAACGCCCTCCGCGCCGGCCCCCAGGTCGTTGTCG
GTACCCCCGGTCGTATCCACGATATGATTGAGCGCCGTGTCCTCAAGACC
GACCAGATGAAGCTCTTCATCCTCGACGAGGCTGATGAGATGCTTTCTGT
GTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATCCAGCAGCGTGCCAT
CAAGCCCATCATTGCCGGACAGATCGAGACTAACTACGATGAGGTTACCG
ACTCTTTCGACTCCATGGACCTGAAGCCCGAGCTGCTTCGCGATGGCTTC
TAACGACAAGGGCTTGGAGGAGATCCCCGAGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR014014 |
| DBxref | InterPro:IPR000629 |
| DBxref | InterPro:IPR011545 |
| DBxref | InterPro:IPR014001 |
| DBxref | InterPro:IPR001650 |
| DBxref | PFAM:PF04851 |
| DBxref | PFAM:PF00271 |
| DBxref | PFAM:PF00270 |
| Product | translation initiation factor eIF4A |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:2859580..2861222 - |
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