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CBS51388_002153-T1, CBS51388_002153-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002153-T1
Unique NameCBS51388_002153-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:2872086..2873139+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002153-T1 ID=CBS51388_002153-T1|Name=CBS51388_002153-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1054bp|location=Sequence derived from alignment at An02:2872086..2873139+ (Aspergillus niger CBS 513.88)
ATGGCTCCCTCGTTCGTAACCATCGACACAACGCCTGATTTCGACATGGC
ACCCGCCCCCTCCTTCCAGCCCATGTCGACCGGCAGCCCCTCCAAGCGCA
CTCTCCTCCTCGCGCCCCCCTCCATCGCCACCCAAGAAGAGAAGCTTCGG
GACCTCTTCACTGCCTTTGACCGCTCCACAACCGATCTGCAGATGCTTGA
CCGCATATCTGCCGGCTTCGTCTCCCTGCCCGCCAACACCTACGATCACA
TTCTTGTCCTAACCGATACCGATGGCACGCGGCGGTCGGAGGCCCTCCAC
CTGCTCACGCGGGATGTCTACACCGCGTTGGTTCCCTGCATGAAGGCCGG
AGCGAAGCTACAGACTCAGGATAACTTTTTCGGAGAGGCTGAGGAGCGCG
AGGCGGTCCTGGCGGGTCTGATCAAGACCGATGCCGGATTTGAGAAGATG
GATCAACCCAAGTCGTTCGCAATTCCTCTGCGACGCAATGGGAAGAAGAA
GGATGCTGCGAAGACAGAGACATTTGCTCCTGCTCCTGCTCCTGCCCCGC
CCGTGCAGCCTGTCACCGTGGGCATGATTAATAATGACGACGATTACGAG
AACGATGATGATCTGATTGACGAGGATACACTGCTGTCGGATGAGGATCT
GAAGAGACCTATTCAACGTGAGTTTCATTCCAAAATTTTTTCTAGAAAAA
AATTGTCATGAAATCGGAGCCATGCTAACAATGCATGCATACACAGCTCC
CGAATGCCAGCCCAAGCCCGGCCGCCGGCGTCGCGCCTGCAAGGACTGCA
CGTGCGGACTCGCAGCACGACTCGAGGCAGAGGAGCAAGCAGAGCGAGAG
AAGGCAGACAAGGCTCTGAACGTGATGAAGCTGGAGACGGAGGACTTGAA
CGAGCTGGACTTTACCGTGCAAGGCAAGACAGGCTCGTGTGGAAACTGCG
CCCTGGGTGATGCCTTCCGGTGCGCGGGCTGTCCGTTCATCGGACTGCCG
GCATTCAAGCCGGGCCAGGAGGTGCAGATCCTGGAAAATGTTGCGCAGTT
GTGA
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Coding sequence (CDS) from alignment at An02:2872086..2873139+

>CBS51388_002153-T1 ID=CBS51388_002153-T1|Name=CBS51388_002153-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1950bp|location=Sequence derived from alignment at An02:2872086..2873139+ (Aspergillus niger CBS 513.88)
ATGGCTCCCTCGTTCGTAACCATCGACACAACGCCTGATTTCGACATGGC
ACCCGCCCCCTCCTTCCAGCCCATGTCGACCGGCAGCCCCTCCAAGCGCA
CTCTCCTCCTCGCGCCCCCCTCCATCGCCACCCAAGAAGAGAAGCTTCGG
GACCTCTTCACTGCCTTTGACCGCTCCACAACCGATCTGCAGATGCTTGA
CCGCATATCTGCCGGCTTCGTCTCCCTGCCCGCCAACACCTACGATCACA
TTCTTGTCCTAACCGATACCGATGGCACGCGGCGGTCGGAGGCCCTCCAC
CTGCTCACGCGGGATGTCTACACCGCGTTGGTTCCCTGCATGAAGGCCGG
AGCGAAGCTACAGACTCAGGATAACTTTTTCGGAGAGGCTGAGGAGCGCG
AGGCGGTCCTGGCGGGTCTGATCAAGACCGATGCCGGATTTGAGAAGATG
GATCAACCCAAGTCGTTCGCAATTCCTCTGCGACGCAATGGGAAGAAGAA
GGATGCTGCGAAGACAGAGACATTTGCTCCTGCTCCTGCTCCTGCCCCGC
CCGTGCAGCCTGTCACCGTGGGCATGATTAATAATGACGACGATTACGAG
AACGATGATGATCTGATTGACGAGGATACACTGCTGTCGGATGAGGATCT
GAAGAGACCTATTCAACCTCCCGAATGCCAGCCCAAGCCCGGCCGCCGGC
GTCGCGCCTGCAAGGACTGCACGTGCGGACTCGCAGCACGACTCGAGGCA
GAGGAGCAAGCAGAGCGAGAGAAGGCAGACAAGGCTCTGAACGTGATGAA
GCTGGAGACGGAGGACTTGAACGAGCTGGACTTTACCGTGCAAGGCAAGA
CAGGCTCGTGTGGAAACTGCGCCCTGGGTGATGCCTTCCGGTGCGCGGGC
TGTCCGTTCATCGGACTGCCGGCATTCAAGCCGGGCCAGGAGGTGCAGAT
CCTGGAAAATGTTGCGCAGTTGTGAATGGCTCCCTCGTTCGTAACCATCG
ACACAACGCCTGATTTCGACATGGCACCCGCCCCCTCCTTCCAGCCCATG
TCGACCGGCAGCCCCTCCAAGCGCACTCTCCTCCTCGCGCCCCCCTCCAT
CGCCACCCAAGAAGAGAAGCTTCGGGACCTCTTCACTGCCTTTGACCGCT
CCACAACCGATCTGCAGATGCTTGACCGCATATCTGCCGGCTTCGTCTCC
CTGCCCGCCAACACCTACGATCACATTCTTGTCCTAACCGATACCGATGG
CACGCGGCGGTCGGAGGCCCTCCACCTGCTCACGCGGGATGTCTACACCG
CGTTGGTTCCCTGCATGAAGGCCGGAGCGAAGCTACAGACTCAGGATAAC
TTTTTCGGAGAGGCTGAGGAGCGCGAGGCGGTCCTGGCGGGTCTGATCAA
GACCGATGCCGGATTTGAGAAGATGGATCAACCCAAGTCGTTCGCAATTC
CTCTGCGACGCAATGGGAAGAAGAAGGATGCTGCGAAGACAGAGACATTT
GCTCCTGCTCCTGCTCCTGCCCCGCCCGTGCAGCCTGTCACCGTGGGCAT
GATTAATAATGACGACGATTACGAGAACGATGATGATCTGATTGACGAGG
ATACACTGCTGTCGGATGAGGATCTGAAGAGACCTATTCAACCTCCCGAA
TGCCAGCCCAAGCCCGGCCGCCGGCGTCGCGCCTGCAAGGACTGCACGTG
CGGACTCGCAGCACGACTCGAGGCAGAGGAGCAAGCAGAGCGAGAGAAGG
CAGACAAGGCTCTGAACGTGATGAAGCTGGAGACGGAGGACTTGAACGAG
CTGGACTTTACCGTGCAAGGCAAGACAGGCTCGTGTGGAAACTGCGCCCT
GGGTGATGCCTTCCGGTGCGCGGGCTGTCCGTTCATCGGACTGCCGGCAT
TCAAGCCGGGCCAGGAGGTGCAGATCCTGGAAAATGTTGCGCAGTTGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0016226iron-sulfur cluster assembly
Vocabulary: Molecular Function
TermDefinition
GO:0051536iron-sulfur cluster binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DRE2CBS51388_002153Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002153-T1.exon1CBS51388_002153-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_002153-T1.exon2CBS51388_002153-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002153-T1.cdsCBS51388_002153-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002153-T1CBS51388_002153-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265040
DBxrefInterPro:IPR007785
DBxrefInterPro:IPR031838
DBxrefPFAM:PF16803
DBxrefPFAM:PF05093
Productelectron carrier
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:2872086..2873139 +
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