|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:2882922..2884713- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002156-T1 ID=CBS51388_002156-T1|Name=CBS51388_002156-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1792bp|location=Sequence derived from alignment at An02:2882922..2884713- (Aspergillus niger CBS 513.88)
ATGTCCGTTACAATGAGGTCAGCTAGCCTTGTGCGCGGCAATGCAGTATT
GCGGCCTAATATGCTCGGTAAGTTGACCTGGAATCACTCGTCTATCTGAG
TCCCCAGAAGGCTTCGACTTCAACTGCTCGATCGCTAACCCGATATTCGC
ATGCAGCCCGGCAACGACTTTCCGGTGCCTTGGCTGCGTCTACGGCCGCA
AACCTCCGATTCAACGGCAGAGGTCTGCCATCCCAACTGTCGGCAATCGC
CATTCTAGTCCCTCAGCAGCGCGGATATGCCACTGATCCATCGACCTCTT
CCTCCTCTTCCTCAAATTCGTTCCCCCCTCCGGGCTTCAACGCAGAACAG
GCCAAGAAGCCCCTCCCCCCGGACACCGTGCAGCCCTCCAAGGATGTCCA
GAAGGTCACACCCAATTCTGGGCAGTCCATTTCGTCTCAAATTGCTGCGC
AGAACAATGGAAAGTCGGCAGAGCTGACGACGGCAAAGTCCGCGGATCTT
GATGGCAAGAAGGAGGAAAAGAAGGAGACGAAGAAACTGACAATCGGACA
AAAGATCAAGAAGGAAGCTCAGCACTACTGGGATGGTACCAAGCTTCTTG
CTACGGAAGTCAGAATCAGTTCCAGGCTGGCATTGAAGATGGCTGCAGGC
TATGAACTCAGTCGCAGAGAGCACCGTCAGGTTAGTAAAGTCCGCATGGG
ATACGCTTAATTGATCTTCGCTAATGATGTCTATGTGTGTAGCTCCAAAG
AACCGTCAAGGATTTGGGTCGCCTTGTTCCTTTCTCCATGTTCGTTATCA
TCCCCTTCGCGGAACTGCTGCTTCCCATTGCCCTGAAGCTGTTCCCGAAC
ATGCTGCCTAGCACCTACGAGGGCCAGAAGGCGCGCGAGAAGAAGGCGCT
GAGTCTGAGCTCGACGCGTAAGGAGGTTTCGGGTTTCCTGAAGAACACAC
TGAGGGAGTCTGGTCTCCCGGTCACTGCTGCGACCGTGAAGAACGAAGAG
TTTGCCGAATTCTTCAAGAAGATCCGCACCACGGGAGAATCGCCCACTCC
TGACGACGTGATCAAGGTGTGCAAGATCTTCAAGGATGACCTGACGCTCG
ACAACCTGTCCCGGCCCCAGCTGGTGGGTATCTGCAAGTACATGAACCTC
AACTCTTTCGGAACGGACGCCATGCTTCGGTACAACATCCGCCACCGCAT
GCGCCAGATTAAGCGCGACGACCGCGCCATTTTCCACGAGGGTGTGGAGT
CTCTGTCTGTTCCTGAACTGCAGATGGCATGTGCCTCCCGTGGTATCCGC
ACGCACGGTGTGTCTCCTGCTCGCCTGCGCGAGGACATGTCGATGTGGCT
GGACCTGCGTCTCAAGCAGGGCGTCCCCTCGACCCTTCTTGTGCTGAGCA
ACGCATACGTCTACGCCCAGGGTGGCAAGGAAGCCGAGATGTCGTCCCAG
ATCGAGGCTCTCCAGTCCGTCTTGTCTAGCATTCCTGAGGAGCTCTTCCA
CGAGATCGAGCTCGAGGTTCACAACGCCGAAGGTGCCGCCACCAACAAGC
AGCGTCTGGAGGTCATCAAGGAGCAGCAAGAGCTGATCGAGGAGGAGAAC
GAGCAGAACAGCGAGAACGAGGAGAAGGGCGTCTCTGCCCCCAAGGACAT
CGAGGATATCGATGACAAGGATGACGTCAAGTACGAAGCCAAGTACAAGA
CGCAAGCGGGTGAGGCCAACGAAGCCGTCCAGGAGGGCGAGAAAGCTGAG
GAGGCACAACAGTCTACCCAGGCTAAGGAAGAGAAGAAATAA back to topCoding sequence (CDS) from alignment at An02:2882922..2884713- >CBS51388_002156-T1 ID=CBS51388_002156-T1|Name=CBS51388_002156-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4923bp|location=Sequence derived from alignment at An02:2882922..2884713- (Aspergillus niger CBS 513.88)
CTCCAAAGAACCGTCAAGGATTTGGGTCGCCTTGTTCCTTTCTCCATGTT
CGTTATCATCCCCTTCGCGGAACTGCTGCTTCCCATTGCCCTGAAGCTGT
TCCCGAACATGCTGCCTAGCACCTACGAGGGCCAGAAGGCGCGCGAGAAG
AAGGCGCTGAGTCTGAGCTCGACGCGTAAGGAGGTTTCGGGTTTCCTGAA
GAACACACTGAGGGAGTCTGGTCTCCCGGTCACTGCTGCGACCGTGAAGA
ACGAAGAGTTTGCCGAATTCTTCAAGAAGATCCGCACCACGGGAGAATCG
CCCACTCCTGACGACGTGATCAAGGTGTGCAAGATCTTCAAGGATGACCT
GACGCTCGACAACCTGTCCCGGCCCCAGCTGGTGGGTATCTGCAAGTACA
TGAACCTCAACTCTTTCGGAACGGACGCCATGCTTCGGTACAACATCCGC
CACCGCATGCGCCAGATTAAGCGCGACGACCGCGCCATTTTCCACGAGGG
TGTGGAGTCTCTGTCTGTTCCTGAACTGCAGATGGCATGTGCCTCCCGTG
GTATCCGCACGCACGGTGTGTCTCCTGCTCGCCTGCGCGAGGACATGTCG
ATGTGGCTGGACCTGCGTCTCAAGCAGGGCGTCCCCTCGACCCTTCTTGT
GCTGAGCAACGCATACGTCTACGCCCAGGGTGGCAAGGAAGCCGAGATGT
CGTCCCAGATCGAGGCTCTCCAGTCCGTCTTGTCTAGCATTCCTGAGGAG
CTCTTCCACGAGATCGAGCTCGAGGTTCACAACGCCGAAGGTGCCGCCAC
CAACAAGCAGCGTCTGGAGGTCATCAAGGAGCAGCAAGAGCTGATCGAGG
AGGAGAACGAGCAGAACAGCGAGAACGAGGAGAAGGGCGTCTCTGCCCCC
AAGGACATCGAGGATATCGATGACAAGGATGACGTCAAGTACGAAGCCAA
GTACAAGACGCAAGCGGGTGAGGCCAACGAAGCCGTCCAGGAGGGCGAGA
AAGCTGAGGAGGCACAACAGTCTACCCAGGCTAAGGAAGAGAAGAAATAA
CCCGGCAACGACTTTCCGGTGCCTTGGCTGCGTCTACGGCCGCAAACCTC
CGATTCAACGGCAGAGGTCTGCCATCCCAACTGTCGGCAATCGCCATTCT
AGTCCCTCAGCAGCGCGGATATGCCACTGATCCATCGACCTCTTCCTCCT
CTTCCTCAAATTCGTTCCCCCCTCCGGGCTTCAACGCAGAACAGGCCAAG
AAGCCCCTCCCCCCGGACACCGTGCAGCCCTCCAAGGATGTCCAGAAGGT
CACACCCAATTCTGGGCAGTCCATTTCGTCTCAAATTGCTGCGCAGAACA
ATGGAAAGTCGGCAGAGCTGACGACGGCAAAGTCCGCGGATCTTGATGGC
AAGAAGGAGGAAAAGAAGGAGACGAAGAAACTGACAATCGGACAAAAGAT
CAAGAAGGAAGCTCAGCACTACTGGGATGGTACCAAGCTTCTTGCTACGG
AAGTCAGAATCAGTTCCAGGCTGGCATTGAAGATGGCTGCAGGCTATGAA
CTCAGTCGCAGAGAGCACCGTCAGATGTCCGTTACAATGAGGTCAGCTAG
CCTTGTGCGCGGCAATGCAGTATTGCGGCCTAATATGCTCGCTCCAAAGA
ACCGTCAAGGATTTGGGTCGCCTTGTTCCTTTCTCCATGTTCGTTATCAT
CCCCTTCGCGGAACTGCTGCTTCCCATTGCCCTGAAGCTGTTCCCGAACA
TGCTGCCTAGCACCTACGAGGGCCAGAAGGCGCGCGAGAAGAAGGCGCTG
AGTCTGAGCTCGACGCGTAAGGAGGTTTCGGGTTTCCTGAAGAACACACT
GAGGGAGTCTGGTCTCCCGGTCACTGCTGCGACCGTGAAGAACGAAGAGT
TTGCCGAATTCTTCAAGAAGATCCGCACCACGGGAGAATCGCCCACTCCT
GACGACGTGATCAAGGTGTGCAAGATCTTCAAGGATGACCTGACGCTCGA
CAACCTGTCCCGGCCCCAGCTGGTGGGTATCTGCAAGTACATGAACCTCA
ACTCTTTCGGAACGGACGCCATGCTTCGGTACAACATCCGCCACCGCATG
CGCCAGATTAAGCGCGACGACCGCGCCATTTTCCACGAGGGTGTGGAGTC
TCTGTCTGTTCCTGAACTGCAGATGGCATGTGCCTCCCGTGGTATCCGCA
CGCACGGTGTGTCTCCTGCTCGCCTGCGCGAGGACATGTCGATGTGGCTG
GACCTGCGTCTCAAGCAGGGCGTCCCCTCGACCCTTCTTGTGCTGAGCAA
CGCATACGTCTACGCCCAGGGTGGCAAGGAAGCCGAGATGTCGTCCCAGA
TCGAGGCTCTCCAGTCCGTCTTGTCTAGCATTCCTGAGGAGCTCTTCCAC
GAGATCGAGCTCGAGGTTCACAACGCCGAAGGTGCCGCCACCAACAAGCA
GCGTCTGGAGGTCATCAAGGAGCAGCAAGAGCTGATCGAGGAGGAGAACG
AGCAGAACAGCGAGAACGAGGAGAAGGGCGTCTCTGCCCCCAAGGACATC
GAGGATATCGATGACAAGGATGACGTCAAGTACGAAGCCAAGTACAAGAC
GCAAGCGGGTGAGGCCAACGAAGCCGTCCAGGAGGGCGAGAAAGCTGAGG
AGGCACAACAGTCTACCCAGGCTAAGGAAGAGAAGAAATAACCCGGCAAC
GACTTTCCGGTGCCTTGGCTGCGTCTACGGCCGCAAACCTCCGATTCAAC
GGCAGAGGTCTGCCATCCCAACTGTCGGCAATCGCCATTCTAGTCCCTCA
GCAGCGCGGATATGCCACTGATCCATCGACCTCTTCCTCCTCTTCCTCAA
ATTCGTTCCCCCCTCCGGGCTTCAACGCAGAACAGGCCAAGAAGCCCCTC
CCCCCGGACACCGTGCAGCCCTCCAAGGATGTCCAGAAGGTCACACCCAA
TTCTGGGCAGTCCATTTCGTCTCAAATTGCTGCGCAGAACAATGGAAAGT
CGGCAGAGCTGACGACGGCAAAGTCCGCGGATCTTGATGGCAAGAAGGAG
GAAAAGAAGGAGACGAAGAAACTGACAATCGGACAAAAGATCAAGAAGGA
AGCTCAGCACTACTGGGATGGTACCAAGCTTCTTGCTACGGAAGTCAGAA
TCAGTTCCAGGCTGGCATTGAAGATGGCTGCAGGCTATGAACTCAGTCGC
AGAGAGCACCGTCAGATGTCCGTTACAATGAGGTCAGCTAGCCTTGTGCG
CGGCAATGCAGTATTGCGGCCTAATATGCTCGCTCCAAAGAACCGTCAAG
GATTTGGGTCGCCTTGTTCCTTTCTCCATGTTCGTTATCATCCCCTTCGC
GGAACTGCTGCTTCCCATTGCCCTGAAGCTGTTCCCGAACATGCTGCCTA
GCACCTACGAGGGCCAGAAGGCGCGCGAGAAGAAGGCGCTGAGTCTGAGC
TCGACGCGTAAGGAGGTTTCGGGTTTCCTGAAGAACACACTGAGGGAGTC
TGGTCTCCCGGTCACTGCTGCGACCGTGAAGAACGAAGAGTTTGCCGAAT
TCTTCAAGAAGATCCGCACCACGGGAGAATCGCCCACTCCTGACGACGTG
ATCAAGGTGTGCAAGATCTTCAAGGATGACCTGACGCTCGACAACCTGTC
CCGGCCCCAGCTGGTGGGTATCTGCAAGTACATGAACCTCAACTCTTTCG
GAACGGACGCCATGCTTCGGTACAACATCCGCCACCGCATGCGCCAGATT
AAGCGCGACGACCGCGCCATTTTCCACGAGGGTGTGGAGTCTCTGTCTGT
TCCTGAACTGCAGATGGCATGTGCCTCCCGTGGTATCCGCACGCACGGTG
TGTCTCCTGCTCGCCTGCGCGAGGACATGTCGATGTGGCTGGACCTGCGT
CTCAAGCAGGGCGTCCCCTCGACCCTTCTTGTGCTGAGCAACGCATACGT
CTACGCCCAGGGTGGCAAGGAAGCCGAGATGTCGTCCCAGATCGAGGCTC
TCCAGTCCGTCTTGTCTAGCATTCCTGAGGAGCTCTTCCACGAGATCGAG
CTCGAGGTTCACAACGCCGAAGGTGCCGCCACCAACAAGCAGCGTCTGGA
GGTCATCAAGGAGCAGCAAGAGCTGATCGAGGAGGAGAACGAGCAGAACA
GCGAGAACGAGGAGAAGGGCGTCTCTGCCCCCAAGGACATCGAGGATATC
GATGACAAGGATGACGTCAAGTACGAAGCCAAGTACAAGACGCAAGCGGG
TGAGGCCAACGAAGCCGTCCAGGAGGGCGAGAAAGCTGAGGAGGCACAAC
AGTCTACCCAGGCTAAGGAAGAGAAGAAATAACCCGGCAACGACTTTCCG
GTGCCTTGGCTGCGTCTACGGCCGCAAACCTCCGATTCAACGGCAGAGGT
CTGCCATCCCAACTGTCGGCAATCGCCATTCTAGTCCCTCAGCAGCGCGG
ATATGCCACTGATCCATCGACCTCTTCCTCCTCTTCCTCAAATTCGTTCC
CCCCTCCGGGCTTCAACGCAGAACAGGCCAAGAAGCCCCTCCCCCCGGAC
ACCGTGCAGCCCTCCAAGGATGTCCAGAAGGTCACACCCAATTCTGGGCA
GTCCATTTCGTCTCAAATTGCTGCGCAGAACAATGGAAAGTCGGCAGAGC
TGACGACGGCAAAGTCCGCGGATCTTGATGGCAAGAAGGAGGAAAAGAAG
GAGACGAAGAAACTGACAATCGGACAAAAGATCAAGAAGGAAGCTCAGCA
CTACTGGGATGGTACCAAGCTTCTTGCTACGGAAGTCAGAATCAGTTCCA
GGCTGGCATTGAAGATGGCTGCAGGCTATGAACTCAGTCGCAGAGAGCAC
CGTCAGATGTCCGTTACAATGAGGTCAGCTAGCCTTGTGCGCGGCAATGC
AGTATTGCGGCCTAATATGCTCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0043022 | ribosome binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR033122 |
| DBxref | InterPro:IPR011685 |
| DBxref | PFAM:PF07766 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:2882922..2884713 - |
|
