|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:2900589..2902285- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002160-T1 ID=CBS51388_002160-T1|Name=CBS51388_002160-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1697bp|location=Sequence derived from alignment at An02:2900589..2902285- (Aspergillus niger CBS 513.88)
ATGCAGTCTGAGTGTAGTTGGTGGGGGAACTGTGTGGGTTATATTTATAT
ATTAATATGATCAATTGAAATCACAGGAAACCTGTCACACCCGAATCTCT
TCTCGAATCAGTTACTAGACAACCTGGCCGACTTGCAGGGCGCAAAGCCG
TACATCCGGGTTGGAGGCAACACTCAGTACGTATCAACTACGCCATCCTC
GATTCTGTTTCCCCGTCAAGGCAAAGAGGGGAAGGAGGGGTAAGGATCTA
ATTAAATCACGCAGAGACTTTGCGCTGTATGATCCAAAGCTACGAGCAGC
CACAAATGCCACATACATTACCAGCATTTCGACGGATTACCCGCTGATTC
TATCATTCGGTCCCGCCTTCTTCGAGTCGTACTTCACCTGGCCAGGAACA
AAGTTCATCCACGGGTTTAATCTGGGAAAGAATAGCTCGTCGGATATAGA
GCTCATGCTAGAGTCCGTGCCGCTAGCGTGTAAGGCTTTGGAAGGGGGCA
AATTGGCGTATTGGGAACTGGGGAATGAGCCGGATTTGTACAAGACGTCC
GCACAGGGCATCAGGAGACCGGCAAGCTGGACGGAACAAGATTATGTGGA
TGAGTGGTTGAACAAGACGGCGCGGATCGAGAAGAGATTGGTCGAGGCGT
GCCCTGAGCTTGCAGAGTCAAAGTATATTGCGCCTTCATTCGCCGGAGTC
ACTAACAGCTTGAATCCTGTGGTGACGTGGGAGAAAGGCCTAGACAAGAG
CCGGAACATTGCCCTCAATTCCGAGCACAAGTGAGTTTGGTGGTGGCCAA
GCCTCCCAACCCCCCAGCCCCAGTTGTACTCTGAATGCGAAAGGATGGAG
CACAGGTCGGCTTTGGCTAATAGGTCGCGTTTGATGCAGCTACATCGGTG
GCGCCACTCAGCCGGGAGTAACACTGCAGAATACGCTAATGAACCATACT
AAGACGGTGGAAAGCGTCGCACAACAGGTCAACGTCTCACGTATCTTGTC
GAAGGACAACCTGACCCCGGGCATACCCTATATTCTGGGCGAGACCAACT
CCTTGTATAACGAGGGCGCGCCTGGACTGTCCAATTCATTCGGAGCTGCG
CTTTGGGGGGTAGACTTCAACCTTTACTGCGCCTCGCAGAACATCCGTCG
GACCCATATGCATCAGGGAAGTAATTACAATTACATCTCCTGGCAGCCAG
TGGGAACCAATCGTACAACCATAGGCACGAAGGCGCCGTATTACGGCAAT
GCCATGGTGGCGGCCATGCTCCACGGCGGAGACGATGTCCGAATTGTCAA
TCTCCCGCTGGCCGCGGATACAGAAGCCGCATACGCCGCGTATGTGAATG
AGACTCTGGTCCGAGTGGCTGTCATCAACTTGGTGGAGTTCAACTACACC
TCAACTGATTCGACAGCGGAGAAAGTGGAGAGCAGACCCAGTGCGAAGTA
TACGTTCCAGTTGCCTTCATCTGAATCGGTGTACGCCGGCTCGGTTTCAG
TGCAGCGGCTGATGGCGAACGGCAGCAACGCCATCACGGGGATCACCTGG
GACGGCTGGTCTTACAATTACGAGCTGGCGCAGGGTAAGCCAGTTCGATT
GCAGAACGTAACTACTGGAGAGGCGATCTCGGTGGGCGACGATGGGGTTG
TGGAGATCGAGATCCCCTACTCCAGCGCTGCAATCCTCAGTCTGTGA back to topCoding sequence (CDS) from alignment at An02:2900589..2902285- >CBS51388_002160-T1 ID=CBS51388_002160-T1|Name=CBS51388_002160-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5760bp|location=Sequence derived from alignment at An02:2900589..2902285- (Aspergillus niger CBS 513.88)
CTACATCGGTGGCGCCACTCAGCCGGGAGTAACACTGCAGAATACGCTAA
TGAACCATACTAAGACGGTGGAAAGCGTCGCACAACAGGTCAACGTCTCA
CGTATCTTGTCGAAGGACAACCTGACCCCGGGCATACCCTATATTCTGGG
CGAGACCAACTCCTTGTATAACGAGGGCGCGCCTGGACTGTCCAATTCAT
TCGGAGCTGCGCTTTGGGGGGTAGACTTCAACCTTTACTGCGCCTCGCAG
AACATCCGTCGGACCCATATGCATCAGGGAAGTAATTACAATTACATCTC
CTGGCAGCCAGTGGGAACCAATCGTACAACCATAGGCACGAAGGCGCCGT
ATTACGGCAATGCCATGGTGGCGGCCATGCTCCACGGCGGAGACGATGTC
CGAATTGTCAATCTCCCGCTGGCCGCGGATACAGAAGCCGCATACGCCGC
GTATGTGAATGAGACTCTGGTCCGAGTGGCTGTCATCAACTTGGTGGAGT
TCAACTACACCTCAACTGATTCGACAGCGGAGAAAGTGGAGAGCAGACCC
AGTGCGAAGTATACGTTCCAGTTGCCTTCATCTGAATCGGTGTACGCCGG
CTCGGTTTCAGTGCAGCGGCTGATGGCGAACGGCAGCAACGCCATCACGG
GGATCACCTGGGACGGCTGGTCTTACAATTACGAGCTGGCGCAGGGTAAG
CCAGTTCGATTGCAGAACGTAACTACTGGAGAGGCGATCTCGGTGGGCGA
CGATGGGGTTGTGGAGATCGAGATCCCCTACTCCAGCGCTGCAATCCTCA
GTCTGTGAAGACTTTGCGCTGTATGATCCAAAGCTACGAGCAGCCACAAA
TGCCACATACATTACCAGCATTTCGACGGATTACCCGCTGATTCTATCAT
TCGGTCCCGCCTTCTTCGAGTCGTACTTCACCTGGCCAGGAACAAAGTTC
ATCCACGGGTTTAATCTGGGAAAGAATAGCTCGTCGGATATAGAGCTCAT
GCTAGAGTCCGTGCCGCTAGCGTGTAAGGCTTTGGAAGGGGGCAAATTGG
CGTATTGGGAACTGGGGAATGAGCCGGATTTGTACAAGACGTCCGCACAG
GGCATCAGGAGACCGGCAAGCTGGACGGAACAAGATTATGTGGATGAGTG
GTTGAACAAGACGGCGCGGATCGAGAAGAGATTGGTCGAGGCGTGCCCTG
AGCTTGCAGAGTCAAAGTATATTGCGCCTTCATTCGCCGGAGTCACTAAC
AGCTTGAATCCTGTGGTGACGTGGGAGAAAGGCCTAGACAAGAGCCGGAA
CATTGCCCTCAATTCCGAGCACAAGAAACCTGTCACACCCGAATCTCTTC
TCGAATCAGTTACTAGACAACCTGGCCGACTTGCAGGGCGCAAAGCCGTA
CATCCGGGTTGGAGGCAACACTCAATGCAGTCTGAGTGTACTACATCGGT
GGCGCCACTCAGCCGGGAGTAACACTGCAGAATACGCTAATGAACCATAC
TAAGACGGTGGAAAGCGTCGCACAACAGGTCAACGTCTCACGTATCTTGT
CGAAGGACAACCTGACCCCGGGCATACCCTATATTCTGGGCGAGACCAAC
TCCTTGTATAACGAGGGCGCGCCTGGACTGTCCAATTCATTCGGAGCTGC
GCTTTGGGGGGTAGACTTCAACCTTTACTGCGCCTCGCAGAACATCCGTC
GGACCCATATGCATCAGGGAAGTAATTACAATTACATCTCCTGGCAGCCA
GTGGGAACCAATCGTACAACCATAGGCACGAAGGCGCCGTATTACGGCAA
TGCCATGGTGGCGGCCATGCTCCACGGCGGAGACGATGTCCGAATTGTCA
ATCTCCCGCTGGCCGCGGATACAGAAGCCGCATACGCCGCGTATGTGAAT
GAGACTCTGGTCCGAGTGGCTGTCATCAACTTGGTGGAGTTCAACTACAC
CTCAACTGATTCGACAGCGGAGAAAGTGGAGAGCAGACCCAGTGCGAAGT
ATACGTTCCAGTTGCCTTCATCTGAATCGGTGTACGCCGGCTCGGTTTCA
GTGCAGCGGCTGATGGCGAACGGCAGCAACGCCATCACGGGGATCACCTG
GGACGGCTGGTCTTACAATTACGAGCTGGCGCAGGGTAAGCCAGTTCGAT
TGCAGAACGTAACTACTGGAGAGGCGATCTCGGTGGGCGACGATGGGGTT
GTGGAGATCGAGATCCCCTACTCCAGCGCTGCAATCCTCAGTCTGTGAAG
ACTTTGCGCTGTATGATCCAAAGCTACGAGCAGCCACAAATGCCACATAC
ATTACCAGCATTTCGACGGATTACCCGCTGATTCTATCATTCGGTCCCGC
CTTCTTCGAGTCGTACTTCACCTGGCCAGGAACAAAGTTCATCCACGGGT
TTAATCTGGGAAAGAATAGCTCGTCGGATATAGAGCTCATGCTAGAGTCC
GTGCCGCTAGCGTGTAAGGCTTTGGAAGGGGGCAAATTGGCGTATTGGGA
ACTGGGGAATGAGCCGGATTTGTACAAGACGTCCGCACAGGGCATCAGGA
GACCGGCAAGCTGGACGGAACAAGATTATGTGGATGAGTGGTTGAACAAG
ACGGCGCGGATCGAGAAGAGATTGGTCGAGGCGTGCCCTGAGCTTGCAGA
GTCAAAGTATATTGCGCCTTCATTCGCCGGAGTCACTAACAGCTTGAATC
CTGTGGTGACGTGGGAGAAAGGCCTAGACAAGAGCCGGAACATTGCCCTC
AATTCCGAGCACAAGAAACCTGTCACACCCGAATCTCTTCTCGAATCAGT
TACTAGACAACCTGGCCGACTTGCAGGGCGCAAAGCCGTACATCCGGGTT
GGAGGCAACACTCAATGCAGTCTGAGTGTACTACATCGGTGGCGCCACTC
AGCCGGGAGTAACACTGCAGAATACGCTAATGAACCATACTAAGACGGTG
GAAAGCGTCGCACAACAGGTCAACGTCTCACGTATCTTGTCGAAGGACAA
CCTGACCCCGGGCATACCCTATATTCTGGGCGAGACCAACTCCTTGTATA
ACGAGGGCGCGCCTGGACTGTCCAATTCATTCGGAGCTGCGCTTTGGGGG
GTAGACTTCAACCTTTACTGCGCCTCGCAGAACATCCGTCGGACCCATAT
GCATCAGGGAAGTAATTACAATTACATCTCCTGGCAGCCAGTGGGAACCA
ATCGTACAACCATAGGCACGAAGGCGCCGTATTACGGCAATGCCATGGTG
GCGGCCATGCTCCACGGCGGAGACGATGTCCGAATTGTCAATCTCCCGCT
GGCCGCGGATACAGAAGCCGCATACGCCGCGTATGTGAATGAGACTCTGG
TCCGAGTGGCTGTCATCAACTTGGTGGAGTTCAACTACACCTCAACTGAT
TCGACAGCGGAGAAAGTGGAGAGCAGACCCAGTGCGAAGTATACGTTCCA
GTTGCCTTCATCTGAATCGGTGTACGCCGGCTCGGTTTCAGTGCAGCGGC
TGATGGCGAACGGCAGCAACGCCATCACGGGGATCACCTGGGACGGCTGG
TCTTACAATTACGAGCTGGCGCAGGGTAAGCCAGTTCGATTGCAGAACGT
AACTACTGGAGAGGCGATCTCGGTGGGCGACGATGGGGTTGTGGAGATCG
AGATCCCCTACTCCAGCGCTGCAATCCTCAGTCTGTGAAGACTTTGCGCT
GTATGATCCAAAGCTACGAGCAGCCACAAATGCCACATACATTACCAGCA
TTTCGACGGATTACCCGCTGATTCTATCATTCGGTCCCGCCTTCTTCGAG
TCGTACTTCACCTGGCCAGGAACAAAGTTCATCCACGGGTTTAATCTGGG
AAAGAATAGCTCGTCGGATATAGAGCTCATGCTAGAGTCCGTGCCGCTAG
CGTGTAAGGCTTTGGAAGGGGGCAAATTGGCGTATTGGGAACTGGGGAAT
GAGCCGGATTTGTACAAGACGTCCGCACAGGGCATCAGGAGACCGGCAAG
CTGGACGGAACAAGATTATGTGGATGAGTGGTTGAACAAGACGGCGCGGA
TCGAGAAGAGATTGGTCGAGGCGTGCCCTGAGCTTGCAGAGTCAAAGTAT
ATTGCGCCTTCATTCGCCGGAGTCACTAACAGCTTGAATCCTGTGGTGAC
GTGGGAGAAAGGCCTAGACAAGAGCCGGAACATTGCCCTCAATTCCGAGC
ACAAGAAACCTGTCACACCCGAATCTCTTCTCGAATCAGTTACTAGACAA
CCTGGCCGACTTGCAGGGCGCAAAGCCGTACATCCGGGTTGGAGGCAACA
CTCAATGCAGTCTGAGTGTACTACATCGGTGGCGCCACTCAGCCGGGAGT
AACACTGCAGAATACGCTAATGAACCATACTAAGACGGTGGAAAGCGTCG
CACAACAGGTCAACGTCTCACGTATCTTGTCGAAGGACAACCTGACCCCG
GGCATACCCTATATTCTGGGCGAGACCAACTCCTTGTATAACGAGGGCGC
GCCTGGACTGTCCAATTCATTCGGAGCTGCGCTTTGGGGGGTAGACTTCA
ACCTTTACTGCGCCTCGCAGAACATCCGTCGGACCCATATGCATCAGGGA
AGTAATTACAATTACATCTCCTGGCAGCCAGTGGGAACCAATCGTACAAC
CATAGGCACGAAGGCGCCGTATTACGGCAATGCCATGGTGGCGGCCATGC
TCCACGGCGGAGACGATGTCCGAATTGTCAATCTCCCGCTGGCCGCGGAT
ACAGAAGCCGCATACGCCGCGTATGTGAATGAGACTCTGGTCCGAGTGGC
TGTCATCAACTTGGTGGAGTTCAACTACACCTCAACTGATTCGACAGCGG
AGAAAGTGGAGAGCAGACCCAGTGCGAAGTATACGTTCCAGTTGCCTTCA
TCTGAATCGGTGTACGCCGGCTCGGTTTCAGTGCAGCGGCTGATGGCGAA
CGGCAGCAACGCCATCACGGGGATCACCTGGGACGGCTGGTCTTACAATT
ACGAGCTGGCGCAGGGTAAGCCAGTTCGATTGCAGAACGTAACTACTGGA
GAGGCGATCTCGGTGGGCGACGATGGGGTTGTGGAGATCGAGATCCCCTA
CTCCAGCGCTGCAATCCTCAGTCTGTGAAGACTTTGCGCTGTATGATCCA
AAGCTACGAGCAGCCACAAATGCCACATACATTACCAGCATTTCGACGGA
TTACCCGCTGATTCTATCATTCGGTCCCGCCTTCTTCGAGTCGTACTTCA
CCTGGCCAGGAACAAAGTTCATCCACGGGTTTAATCTGGGAAAGAATAGC
TCGTCGGATATAGAGCTCATGCTAGAGTCCGTGCCGCTAGCGTGTAAGGC
TTTGGAAGGGGGCAAATTGGCGTATTGGGAACTGGGGAATGAGCCGGATT
TGTACAAGACGTCCGCACAGGGCATCAGGAGACCGGCAAGCTGGACGGAA
CAAGATTATGTGGATGAGTGGTTGAACAAGACGGCGCGGATCGAGAAGAG
ATTGGTCGAGGCGTGCCCTGAGCTTGCAGAGTCAAAGTATATTGCGCCTT
CATTCGCCGGAGTCACTAACAGCTTGAATCCTGTGGTGACGTGGGAGAAA
GGCCTAGACAAGAGCCGGAACATTGCCCTCAATTCCGAGCACAAGAAACC
TGTCACACCCGAATCTCTTCTCGAATCAGTTACTAGACAACCTGGCCGAC
TTGCAGGGCGCAAAGCCGTACATCCGGGTTGGAGGCAACACTCAATGCAG
TCTGAGTGTA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH79 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR031728 |
| DBxref | PFAM:PF16862 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:2900589..2902285 - |
|
