You are here

Home

CBS51388_002168-T1, CBS51388_002168-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002168-T1
Unique NameCBS51388_002168-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:2921000..2922075+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002168-T1 ID=CBS51388_002168-T1|Name=CBS51388_002168-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1076bp|location=Sequence derived from alignment at An02:2921000..2922075+ (Aspergillus niger CBS 513.88)
ATGGCGTGTCTCAACGGCCGGGTCTCATACGCTTCCTGGCGTTTGAGGAT
ATTCCGGCAGCTTTTCCAGCCGAATGGCTCCCCTGAGGTGGGATATCGTG
CTATATCGACCAACAATGGTGCACGGGAACCTCGTTCGGCGGCCTCCGCG
GACAAGACATTGAAGTCTACCCCGACAGAAGAAGCAGAAGCTGCTGCTTC
TGAAGACAAGAAAGGATTAGGCCGACCTCCACGCCCCTCCGAACTCCTCC
CTCAATCCCCCCTCCTCACCAACCCCCGCCCCGGCCACGACAAGCTACAC
AAGAAGAAACGCCGCCCCGACCCCAACGAATCCGACATCCACCTGAACCC
CTGGGCGCAGGCCCTCGCCTCGCCTCTCCGAGCCTGCAAAGTAACCGGCG
CGCGAGTCCCGCGCGCATTTATGAGCGAATGGGGGTTTGTACAACGTCCG
GACGTTGAAGACAAGCTCTGGTTGTTACCCGTGGGACTTATGAAGGACAA
ACTATATCCCTCTTCCACAAATCCTCCCCAAGAAGAACACACCAAAAACG
ACGACATTGACAAGACCGACGCCAACAAGAAAACCCGCCACCTAACCCTC
CGCATAGTCGACCGCCTCCCCCTCCTCCGCACCCTAACCTCAACCTACTG
GAGCACCAAAACCAACCGTAAGCGCGAACCGCTCGCCAAACTCCTCCCCC
ACCGCTGGAAACACCCACTCGGCCCCGTAACAAGCTGGGAGGAATCGCAG
CTCTCCCTGCGAGAAGACACACCCACTTTCACTCTGAAAATGATGCGCCA
AGACGTGGTCCAGAAACTCAAAGCGGCGTCCGACCCACCCAACACGCAGC
CCGAAGCGAAGCGCCGAGTGTGGACAGTTCTGCCGGTTAGTAAGTACGGA
CGAGCTTACTTAGCGCGCCGGACGTGGTCTATGGAGCCGTTCGAGCGGAT
GGAGTGTTGCGGGGTGTTGGTGATGAATCGGCGGAGGGGGAAGCCCGGGA
GAGTTACGGGGTTGTGGCCGCGGATGCCGGAGATCGTGTGTATATCGAAG
GAGAAGAAGGTGGCACCGGTGTTTGA
back to top

Coding sequence (CDS) from alignment at An02:2921000..2922075+

>CBS51388_002168-T1 ID=CBS51388_002168-T1|Name=CBS51388_002168-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2064bp|location=Sequence derived from alignment at An02:2921000..2922075+ (Aspergillus niger CBS 513.88)
ATGGCGTGTCTCAACGGCCGGGTCTCATACGCTTCCTGGCGTTTGAGGAT
ATTCCGGCAGCTTTTCCAGCCGAATGGCTCCCCTGAGGTGGGATATCGTG
CTATATCGACCAACAATGGTGCACGGGAACCTCGTTCGGCGGCCTCCGCG
GACAAGACATTGAAGTCTACCCCGACAGAAGAAGCAGAAGCTGCTGCTTC
TGAAGACAAGAAAGGATTAGGCCGACCTCCACGCCCCTCCGAACTCCTCC
CTCAATCCCCCCTCCTCACCAACCCCCGCCCCGGCCACGACAAGCTACAC
AAGAAGAAACGCCGCCCCGACCCCAACGAATCCGACATCCACCTGAACCC
CTGGGCGCAGGCCCTCGCCTCGCCTCTCCGAGCCTGCAAAGTAACCGGCG
CGCGAGTCCCGCGCGCATTTATGAGCGAATGGGGGTTTGTACAACGTCCG
GACGTTGAAGACAAGCTCTGGTTGTTACCCGTGGGACTTATGAAGGACAA
ACTATATCCCTCTTCCACAAATCCTCCCCAAGAAGAACACACCAAAAACG
ACGACATTGACAAGACCGACGCCAACAAGAAAACCCGCCACCTAACCCTC
CGCATAGTCGACCGCCTCCCCCTCCTCCGCACCCTAACCTCAACCTACTG
GAGCACCAAAACCAACCGTAAGCGCGAACCGCTCGCCAAACTCCTCCCCC
ACCGCTGGAAACACCCACTCGGCCCCGTAACAAGCTGGGAGGAATCGCAG
CTCTCCCTGCGAGAAGACACACCCACTTTCACTCTGAAAATGATGCGCCA
AGACGTGGTCCAGAAACTCAAAGCGGCGTCCGACCCACCCAACACGCAGC
CCGAAGCGAAGCGCCGAGTCGCGCCGGACGTGGTCTATGGAGCCGTTCGA
GCGGATGGAGTGTTGCGGGGTGTTGGTGATGAATCGGCGGAGGGGGAAGC
CCGGGAGAGTTACGGGGTTGTGGCCGCGGATGCCGGAGATCGTGTGTATA
TCGAAGGAGAAGAAGGTGGCACCGGTGTTTGAATGGCGTGTCTCAACGGC
CGGGTCTCATACGCTTCCTGGCGTTTGAGGATATTCCGGCAGCTTTTCCA
GCCGAATGGCTCCCCTGAGGTGGGATATCGTGCTATATCGACCAACAATG
GTGCACGGGAACCTCGTTCGGCGGCCTCCGCGGACAAGACATTGAAGTCT
ACCCCGACAGAAGAAGCAGAAGCTGCTGCTTCTGAAGACAAGAAAGGATT
AGGCCGACCTCCACGCCCCTCCGAACTCCTCCCTCAATCCCCCCTCCTCA
CCAACCCCCGCCCCGGCCACGACAAGCTACACAAGAAGAAACGCCGCCCC
GACCCCAACGAATCCGACATCCACCTGAACCCCTGGGCGCAGGCCCTCGC
CTCGCCTCTCCGAGCCTGCAAAGTAACCGGCGCGCGAGTCCCGCGCGCAT
TTATGAGCGAATGGGGGTTTGTACAACGTCCGGACGTTGAAGACAAGCTC
TGGTTGTTACCCGTGGGACTTATGAAGGACAAACTATATCCCTCTTCCAC
AAATCCTCCCCAAGAAGAACACACCAAAAACGACGACATTGACAAGACCG
ACGCCAACAAGAAAACCCGCCACCTAACCCTCCGCATAGTCGACCGCCTC
CCCCTCCTCCGCACCCTAACCTCAACCTACTGGAGCACCAAAACCAACCG
TAAGCGCGAACCGCTCGCCAAACTCCTCCCCCACCGCTGGAAACACCCAC
TCGGCCCCGTAACAAGCTGGGAGGAATCGCAGCTCTCCCTGCGAGAAGAC
ACACCCACTTTCACTCTGAAAATGATGCGCCAAGACGTGGTCCAGAAACT
CAAAGCGGCGTCCGACCCACCCAACACGCAGCCCGAAGCGAAGCGCCGAG
TCGCGCCGGACGTGGTCTATGGAGCCGTTCGAGCGGATGGAGTGTTGCGG
GGTGTTGGTGATGAATCGGCGGAGGGGGAAGCCCGGGAGAGTTACGGGGT
TGTGGCCGCGGATGCCGGAGATCGTGTGTATATCGAAGGAGAAGAAGGTG
GCACCGGTGTTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_002168CBS51388_002168Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002168-T1.exon1CBS51388_002168-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_002168-T1.exon2CBS51388_002168-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002168-T1.cdsCBS51388_002168-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002168-T1CBS51388_002168-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:2921000..2922075 +
Powered by Drupal