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CBS51388_002171-T1, CBS51388_002171-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002171-T1
Unique NameCBS51388_002171-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:2925812..2927096-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002171-T1 ID=CBS51388_002171-T1|Name=CBS51388_002171-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1285bp|location=Sequence derived from alignment at An02:2925812..2927096- (Aspergillus niger CBS 513.88)
ATGGCCAGCATCGCCGATCTACAAGCCCGCTTGAAAGAGCTCTCAACAGC
TCTGTCCCACATCCAGCCGCTGGTCTCTCGGTTAAAGGGCTTTACGACTG
CAGTTGGACAGGGCGATCAGCCGCGATTGGAACTAGGGACGGAGATCCAT
ACTCGACTGAAAGAGGCGGAGGAGCAATTGGAGTTGCTGAAGGTCGAGGT
TGAGGCCCTGGAGGCTGCAGCGGATACGCGGCGCAAGGGTGTGGATAATG
AGAAGGAGTCGGAGAGGGAACGGGTTATTGCCTTGGCTGGACGGTTGGCG
GATGATTTGAAGAGGTAGGTGGAATCGACTGATTGCTCTTCCTGGATTGT
TTACTTATGGGTATGTTACGGCTTTGGCAGAACGAGAGGAGACTTCCGGA
ACGCACAATTACAAGCGAAGCGGAACGCTGAAGTTGCCCGACGGAAAGAG
CGAGAGCTACTGTTTACGAGGTCACAAAGTGCGGAGAGGAAGAAGCAGTC
GAGTGAGAAGCTGACGCAGGATGATATTGTCATGAATGCTTCGAATGATG
TTACGGCTGCGCTGAGACGGACGCATCAGTTGATGCAGGCGGAGCTGTCG
CGGAGTCAGTTTGCGCAGGAGACGTTAGGTTTGTGCTGGTTTACCTTGGG
TGCAGGTCAGGGTAATGGCTAACATTGGTGGTTTAGATCAATCGACTGCT
GCGCTGTCCTCGCTGTCAGAATCCTATACAGATCTCGATTCTTTGATTTC
GTCGTCACGCAATCTCATCGGGTCTTTGCTACGCTCGCAAAAGTCGGATA
CTTGGTACCTTGAGACGGCTTTCTACATATTGGTTGGCACCATTATTTGG
CTTGTCTTCCGGCGGATATTATATGGTCCCCTGTGGTGGCTCGTCTGGCT
GCCTCTCAGGCTGTTCGCGAGGTTCACGTTTGCTATTTTGGGCGCCGTCG
GGATTACCAGTAAGGCTGTTCAGTCTTCTGAACCTAGTACGATGCTCGAA
TATGTGCCGCAAGAGACCCCAATGGTTGAGCAGAAGGTGGAGCCGAACAT
CCAAAGTGCTGAGGGCGAAGCGGTCTGGGATCAAGTTCCAGTTACGGATG
AGGCAGAGGAGGACCGCTTAATTGATGAGATCGGCAAAATGGTGGAAGAA
AGCGAGGAGCAAGAGGAGACCAACATTGACGACATCTCAGAAGAGGAAAG
GCAAAGGCAGGCGGAGTTGCCCCGGAACCCTAAGAAGAGGATGTTCGAGG
CTACGGATGTACCACAGCAGAAGGACGAACTATAG
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Coding sequence (CDS) from alignment at An02:2925812..2927096-

>CBS51388_002171-T1 ID=CBS51388_002171-T1|Name=CBS51388_002171-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3447bp|location=Sequence derived from alignment at An02:2925812..2927096- (Aspergillus niger CBS 513.88)
ATCTCGATTCTTTGATTTCGTCGTCACGCAATCTCATCGGGTCTTTGCTA
CGCTCGCAAAAGTCGGATACTTGGTACCTTGAGACGGCTTTCTACATATT
GGTTGGCACCATTATTTGGCTTGTCTTCCGGCGGATATTATATGGTCCCC
TGTGGTGGCTCGTCTGGCTGCCTCTCAGGCTGTTCGCGAGGTTCACGTTT
GCTATTTTGGGCGCCGTCGGGATTACCAGTAAGGCTGTTCAGTCTTCTGA
ACCTAGTACGATGCTCGAATATGTGCCGCAAGAGACCCCAATGGTTGAGC
AGAAGGTGGAGCCGAACATCCAAAGTGCTGAGGGCGAAGCGGTCTGGGAT
CAAGTTCCAGTTACGGATGAGGCAGAGGAGGACCGCTTAATTGATGAGAT
CGGCAAAATGGTGGAAGAAAGCGAGGAGCAAGAGGAGACCAACATTGACG
ACATCTCAGAAGAGGAAAGGCAAAGGCAGGCGGAGTTGCCCCGGAACCCT
AAGAAGAGGATGTTCGAGGCTACGGATGTACCACAGCAGAAGGACGAACT
ATAGAACGAGAGGAGACTTCCGGAACGCACAATTACAAGCGAAGCGGAAC
GCTGAAGTTGCCCGACGGAAAGAGCGAGAGCTACTGTTTACGAGGTCACA
AAGTGCGGAGAGGAAGAAGCAGTCGAGTGAGAAGCTGACGCAGGATGATA
TTGTCATGAATGCTTCGAATGATGTTACGGCTGCGCTGAGACGGACGCAT
CAGTTGATGCAGGCGGAGCTGTCGCGGAGTCAGTTTGCGCAGGAGACGTT
AGGTTTGTGCTGGTTTACCTTGGGTGCAGGTCAGGATGGCCAGCATCGCC
GATCTACAAGCCCGCTTGAAAGAGCTCTCAACAGCTCTGTCCCACATCCA
GCCGCTGGTCTCTCGGTTAAAGGGCTTTACGACTGCAGTTGGACAGGGCG
ATCAGCCGCGATTGGAACTAGGGACGGAGATCCATACTCGACTGAAAGAG
GCGGAGGAGCAATTGGAGTTGCTGAAGGTCGAGGTTGAGGCCCTGGAGGC
TGCAGCGGATACGCGGCGCAAGGGTGTGGATAATGAGAAGGAGTCGGAGA
GGGAACGGGTTATTGCCTTGGCTGGACGGTTGGCGGATGATTTGAAGAGA
TCTCGATTCTTTGATTTCGTCGTCACGCAATCTCATCGGGTCTTTGCTAC
GCTCGCAAAAGTCGGATACTTGGTACCTTGAGACGGCTTTCTACATATTG
GTTGGCACCATTATTTGGCTTGTCTTCCGGCGGATATTATATGGTCCCCT
GTGGTGGCTCGTCTGGCTGCCTCTCAGGCTGTTCGCGAGGTTCACGTTTG
CTATTTTGGGCGCCGTCGGGATTACCAGTAAGGCTGTTCAGTCTTCTGAA
CCTAGTACGATGCTCGAATATGTGCCGCAAGAGACCCCAATGGTTGAGCA
GAAGGTGGAGCCGAACATCCAAAGTGCTGAGGGCGAAGCGGTCTGGGATC
AAGTTCCAGTTACGGATGAGGCAGAGGAGGACCGCTTAATTGATGAGATC
GGCAAAATGGTGGAAGAAAGCGAGGAGCAAGAGGAGACCAACATTGACGA
CATCTCAGAAGAGGAAAGGCAAAGGCAGGCGGAGTTGCCCCGGAACCCTA
AGAAGAGGATGTTCGAGGCTACGGATGTACCACAGCAGAAGGACGAACTA
TAGAACGAGAGGAGACTTCCGGAACGCACAATTACAAGCGAAGCGGAACG
CTGAAGTTGCCCGACGGAAAGAGCGAGAGCTACTGTTTACGAGGTCACAA
AGTGCGGAGAGGAAGAAGCAGTCGAGTGAGAAGCTGACGCAGGATGATAT
TGTCATGAATGCTTCGAATGATGTTACGGCTGCGCTGAGACGGACGCATC
AGTTGATGCAGGCGGAGCTGTCGCGGAGTCAGTTTGCGCAGGAGACGTTA
GGTTTGTGCTGGTTTACCTTGGGTGCAGGTCAGGATGGCCAGCATCGCCG
ATCTACAAGCCCGCTTGAAAGAGCTCTCAACAGCTCTGTCCCACATCCAG
CCGCTGGTCTCTCGGTTAAAGGGCTTTACGACTGCAGTTGGACAGGGCGA
TCAGCCGCGATTGGAACTAGGGACGGAGATCCATACTCGACTGAAAGAGG
CGGAGGAGCAATTGGAGTTGCTGAAGGTCGAGGTTGAGGCCCTGGAGGCT
GCAGCGGATACGCGGCGCAAGGGTGTGGATAATGAGAAGGAGTCGGAGAG
GGAACGGGTTATTGCCTTGGCTGGACGGTTGGCGGATGATTTGAAGAGAT
CTCGATTCTTTGATTTCGTCGTCACGCAATCTCATCGGGTCTTTGCTACG
CTCGCAAAAGTCGGATACTTGGTACCTTGAGACGGCTTTCTACATATTGG
TTGGCACCATTATTTGGCTTGTCTTCCGGCGGATATTATATGGTCCCCTG
TGGTGGCTCGTCTGGCTGCCTCTCAGGCTGTTCGCGAGGTTCACGTTTGC
TATTTTGGGCGCCGTCGGGATTACCAGTAAGGCTGTTCAGTCTTCTGAAC
CTAGTACGATGCTCGAATATGTGCCGCAAGAGACCCCAATGGTTGAGCAG
AAGGTGGAGCCGAACATCCAAAGTGCTGAGGGCGAAGCGGTCTGGGATCA
AGTTCCAGTTACGGATGAGGCAGAGGAGGACCGCTTAATTGATGAGATCG
GCAAAATGGTGGAAGAAAGCGAGGAGCAAGAGGAGACCAACATTGACGAC
ATCTCAGAAGAGGAAAGGCAAAGGCAGGCGGAGTTGCCCCGGAACCCTAA
GAAGAGGATGTTCGAGGCTACGGATGTACCACAGCAGAAGGACGAACTAT
AGAACGAGAGGAGACTTCCGGAACGCACAATTACAAGCGAAGCGGAACGC
TGAAGTTGCCCGACGGAAAGAGCGAGAGCTACTGTTTACGAGGTCACAAA
GTGCGGAGAGGAAGAAGCAGTCGAGTGAGAAGCTGACGCAGGATGATATT
GTCATGAATGCTTCGAATGATGTTACGGCTGCGCTGAGACGGACGCATCA
GTTGATGCAGGCGGAGCTGTCGCGGAGTCAGTTTGCGCAGGAGACGTTAG
GTTTGTGCTGGTTTACCTTGGGTGCAGGTCAGGATGGCCAGCATCGCCGA
TCTACAAGCCCGCTTGAAAGAGCTCTCAACAGCTCTGTCCCACATCCAGC
CGCTGGTCTCTCGGTTAAAGGGCTTTACGACTGCAGTTGGACAGGGCGAT
CAGCCGCGATTGGAACTAGGGACGGAGATCCATACTCGACTGAAAGAGGC
GGAGGAGCAATTGGAGTTGCTGAAGGTCGAGGTTGAGGCCCTGGAGGCTG
CAGCGGATACGCGGCGCAAGGGTGTGGATAATGAGAAGGAGTCGGAGAGG
GAACGGGTTATTGCCTTGGCTGGACGGTTGGCGGATGATTTGAAGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005484SNAP receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0006890retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_002171CBS51388_002171Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002171-T1CBS51388_002171-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002171-T1.cdsCBS51388_002171-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002171-T1.exon3CBS51388_002171-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_002171-T1.exon2CBS51388_002171-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_002171-T1.exon1CBS51388_002171-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR005606
DBxrefPFAM:PF03908
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:2925812..2927096 -
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