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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:2966683..2968714+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002186-T1 ID=CBS51388_002186-T1|Name=CBS51388_002186-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2032bp|location=Sequence derived from alignment at An02:2966683..2968714+ (Aspergillus niger CBS 513.88)
ATGGGTCGCAGAAAGATCGAGATCAAGGCGATCAAGGATGATCGCAACCG
CTCAGTGTAAGTGCTAAAGCTGGTGGATCTCTTCACCTCTCCCCATTAAA
CCCTAGTTCGTCAAGCTAACGCTCTGGTGCGCGACTAGGACCTTTCTGAA
ACGGAAGGGTGGTCTGTTCAAGAAGGCACATGAGCTTGCGGTCCTGTGTT
CGGTTGATGTCGCTGTTATTATCTTTGGTCACAACAAGAAGCTCTACGAA
TTCTCGTCATGTGATATGCGAGAGGCCCTCACTCGATATCAATACGTGCG
TTGTCCACCTAACCCGCTCGTCTGGAAAGACTGTCGTTGATCTGACATTG
CCGCTTTCCTATGCTTTTAGTTTGGTCCCCCACATGAACACAAAGGCCCT
GAAGACTTTAACGGCAAACGCGACGATGATGATGACGAAGATGAGACGAC
GCCTGCCCCCGAAGATGTGCATCCTACGCCTCCAAATCCTCCCATGATTC
CCGCCCACCTGCCAGGTCATCCCGGCTTCCAGCACGTCACTCATGCGCCG
TCTGCTTCCCCGCCCATAGGGAATGGGATGGCATTTGCTCCGCGTCACGG
TACCCCTCAACCGCAGGGAGTTTCTCGGCCTTCGTCTCGGAATCATCTTC
GTCGGGTGAGCTCCAATATGGGACCTCAACAGCATCACCATGCGACCCCT
CCGCCGCCTCCGCCGCCGCCGCAAAATGGCTTCACGTACATTCCTAATCC
TTCGGTATATAACCCCAACGCTGCTCACGCCATGGCTCAACCTCCCCGCC
CACCTCAGTTCACTCATTACGGACCCCCCGGGCCGCATCACCAACCCCCT
CCGCCTCCACAGCATCATCCAGCGATGCCGCCACACTCCATGCCCCCACA
GTCTATGCCTCCACATACAATGGCACCGCAAGCCATGCCGCCGCACCACC
AGGCTCCTCCACACATGCCACACCCGCCTCATGCACTTTCACAGCAACCG
CCTCCAATGGCCATGACCCAGCCGCCCCATGCCGCCATCCCGCAGGTCGC
GCAAGCGTTTCTCCCAGAGCAAGGACGAAATTCCATGCCTCCGACGTTTA
CAACAGAACAGCAACCACCGCCGCCACGAACAGTGTCGCTTCCTGAAGGA
ACCGCTCCGACAGACGCAATGCCAGGTCCCATGAAGACGGAAGGAACCCC
ATCCCCGCCGCACCAGCGATCTCTCTCTTCCAAGTCTCGCAGTATCTTCA
CACCCATTGACGACCGAGGCTCCGTATTGGCGCGCCATTTTGGCGTAGGT
CCTCCGACGGAGGCGGGAGAGAATGCGCAAACGAAGGCTGAAGGAGCAAC
ACTCGGACCAAACGAAGGGAAGCCTGCTGGGCTAACTGCAAAGCCCCCTC
CTCCACCTCCCCGAGCGGCCACGGAAGCCCCGCGTCCCCAGCCGGTAGTT
GACCTGAAGCCGCCTGTGCGTACAAACAGCGGCCAGTTCCCGCCTAAGCG
CCCGCAGTTGAAGGTACAGATACCGAGTGAGAATTCGGACCGGGGCAGCG
CAACGGCAGATTCATCGTCACGTGATTCTGCGGGGAACAAAACGCTCACG
CCTGCCAAAGCGAATCCAGACACCGGTCACTCGAGCGTGGTATTGCCCCC
GCCCTCGCCGTCTGCGGGTGCGATATTAAGTGCAGGGGCTCAAGGGCCGC
CAAATCCTTTTGCCCGGCCACCGCCTCCGGGAGCAGCACCACAGAACAAC
AGTGCATACAACAATAATAGCAATATAGATACGCCAATCTCTGCTCTTCC
TAGTCGGTTCGTCTCGGATGCGCTTCTCCCGTCACCGTCCAGTTTCTTTC
CGGAATGGGGCTTTGGGCGGTCTGGACCAGACAGCAACATGTTGCCCAGT
CCCTTGACGTTCCCTACGCCGGCGGTACAAAGTGGCCCCGGGTTTGGGCG
CGAGGATGAGCAAGACAAAAAGCGCAAAAGCCCTGATAGTGGACCCAATG
CGGAAGGGGTAGTGAAGAAACCAAAGACGTAA back to topCoding sequence (CDS) from alignment at An02:2966683..2968714+ >CBS51388_002186-T1 ID=CBS51388_002186-T1|Name=CBS51388_002186-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5625bp|location=Sequence derived from alignment at An02:2966683..2968714+ (Aspergillus niger CBS 513.88)
ATGGGTCGCAGAAAGATCGAGATCAAGGCGATCAAGGATGATCGCAACCG
CTCAGTGACCTTTCTGAAACGGAAGGGTGGTCTGTTCAAGAAGGCACATG
AGCTTGCGGTCCTGTGTTCGGTTGATGTCGCTGTTATTATCTTTGGTCAC
AACAAGAAGCTCTACGAATTCTCGTCATGTGATATGCGAGAGGCCCTCAC
TCGATATCAATACTTTGGTCCCCCACATGAACACAAAGGCCCTGAAGACT
TTAACGGCAAACGCGACGATGATGATGACGAAGATGAGACGACGCCTGCC
CCCGAAGATGTGCATCCTACGCCTCCAAATCCTCCCATGATTCCCGCCCA
CCTGCCAGGTCATCCCGGCTTCCAGCACGTCACTCATGCGCCGTCTGCTT
CCCCGCCCATAGGGAATGGGATGGCATTTGCTCCGCGTCACGGTACCCCT
CAACCGCAGGGAGTTTCTCGGCCTTCGTCTCGGAATCATCTTCGTCGGGT
GAGCTCCAATATGGGACCTCAACAGCATCACCATGCGACCCCTCCGCCGC
CTCCGCCGCCGCCGCAAAATGGCTTCACGTACATTCCTAATCCTTCGGTA
TATAACCCCAACGCTGCTCACGCCATGGCTCAACCTCCCCGCCCACCTCA
GTTCACTCATTACGGACCCCCCGGGCCGCATCACCAACCCCCTCCGCCTC
CACAGCATCATCCAGCGATGCCGCCACACTCCATGCCCCCACAGTCTATG
CCTCCACATACAATGGCACCGCAAGCCATGCCGCCGCACCACCAGGCTCC
TCCACACATGCCACACCCGCCTCATGCACTTTCACAGCAACCGCCTCCAA
TGGCCATGACCCAGCCGCCCCATGCCGCCATCCCGCAGGTCGCGCAAGCG
TTTCTCCCAGAGCAAGGACGAAATTCCATGCCTCCGACGTTTACAACAGA
ACAGCAACCACCGCCGCCACGAACAGTGTCGCTTCCTGAAGGAACCGCTC
CGACAGACGCAATGCCAGGTCCCATGAAGACGGAAGGAACCCCATCCCCG
CCGCACCAGCGATCTCTCTCTTCCAAGTCTCGCAGTATCTTCACACCCAT
TGACGACCGAGGCTCCGTATTGGCGCGCCATTTTGGCGTAGGTCCTCCGA
CGGAGGCGGGAGAGAATGCGCAAACGAAGGCTGAAGGAGCAACACTCGGA
CCAAACGAAGGGAAGCCTGCTGGGCTAACTGCAAAGCCCCCTCCTCCACC
TCCCCGAGCGGCCACGGAAGCCCCGCGTCCCCAGCCGGTAGTTGACCTGA
AGCCGCCTGTGCGTACAAACAGCGGCCAGTTCCCGCCTAAGCGCCCGCAG
TTGAAGGTACAGATACCGAGTGAGAATTCGGACCGGGGCAGCGCAACGGC
AGATTCATCGTCACGTGATTCTGCGGGGAACAAAACGCTCACGCCTGCCA
AAGCGAATCCAGACACCGGTCACTCGAGCGTGGTATTGCCCCCGCCCTCG
CCGTCTGCGGGTGCGATATTAAGTGCAGGGGCTCAAGGGCCGCCAAATCC
TTTTGCCCGGCCACCGCCTCCGGGAGCAGCACCACAGAACAACAGTGCAT
ACAACAATAATAGCAATATAGATACGCCAATCTCTGCTCTTCCTAGTCGG
TTCGTCTCGGATGCGCTTCTCCCGTCACCGTCCAGTTTCTTTCCGGAATG
GGGCTTTGGGCGGTCTGGACCAGACAGCAACATGTTGCCCAGTCCCTTGA
CGTTCCCTACGCCGGCGGTACAAAGTGGCCCCGGGTTTGGGCGCGAGGAT
GAGCAAGACAAAAAGCGCAAAAGCCCTGATAGTGGACCCAATGCGGAAGG
GGTAGTGAAGAAACCAAAGACGTAAATGGGTCGCAGAAAGATCGAGATCA
AGGCGATCAAGGATGATCGCAACCGCTCAGTGACCTTTCTGAAACGGAAG
GGTGGTCTGTTCAAGAAGGCACATGAGCTTGCGGTCCTGTGTTCGGTTGA
TGTCGCTGTTATTATCTTTGGTCACAACAAGAAGCTCTACGAATTCTCGT
CATGTGATATGCGAGAGGCCCTCACTCGATATCAATACTTTGGTCCCCCA
CATGAACACAAAGGCCCTGAAGACTTTAACGGCAAACGCGACGATGATGA
TGACGAAGATGAGACGACGCCTGCCCCCGAAGATGTGCATCCTACGCCTC
CAAATCCTCCCATGATTCCCGCCCACCTGCCAGGTCATCCCGGCTTCCAG
CACGTCACTCATGCGCCGTCTGCTTCCCCGCCCATAGGGAATGGGATGGC
ATTTGCTCCGCGTCACGGTACCCCTCAACCGCAGGGAGTTTCTCGGCCTT
CGTCTCGGAATCATCTTCGTCGGGTGAGCTCCAATATGGGACCTCAACAG
CATCACCATGCGACCCCTCCGCCGCCTCCGCCGCCGCCGCAAAATGGCTT
CACGTACATTCCTAATCCTTCGGTATATAACCCCAACGCTGCTCACGCCA
TGGCTCAACCTCCCCGCCCACCTCAGTTCACTCATTACGGACCCCCCGGG
CCGCATCACCAACCCCCTCCGCCTCCACAGCATCATCCAGCGATGCCGCC
ACACTCCATGCCCCCACAGTCTATGCCTCCACATACAATGGCACCGCAAG
CCATGCCGCCGCACCACCAGGCTCCTCCACACATGCCACACCCGCCTCAT
GCACTTTCACAGCAACCGCCTCCAATGGCCATGACCCAGCCGCCCCATGC
CGCCATCCCGCAGGTCGCGCAAGCGTTTCTCCCAGAGCAAGGACGAAATT
CCATGCCTCCGACGTTTACAACAGAACAGCAACCACCGCCGCCACGAACA
GTGTCGCTTCCTGAAGGAACCGCTCCGACAGACGCAATGCCAGGTCCCAT
GAAGACGGAAGGAACCCCATCCCCGCCGCACCAGCGATCTCTCTCTTCCA
AGTCTCGCAGTATCTTCACACCCATTGACGACCGAGGCTCCGTATTGGCG
CGCCATTTTGGCGTAGGTCCTCCGACGGAGGCGGGAGAGAATGCGCAAAC
GAAGGCTGAAGGAGCAACACTCGGACCAAACGAAGGGAAGCCTGCTGGGC
TAACTGCAAAGCCCCCTCCTCCACCTCCCCGAGCGGCCACGGAAGCCCCG
CGTCCCCAGCCGGTAGTTGACCTGAAGCCGCCTGTGCGTACAAACAGCGG
CCAGTTCCCGCCTAAGCGCCCGCAGTTGAAGGTACAGATACCGAGTGAGA
ATTCGGACCGGGGCAGCGCAACGGCAGATTCATCGTCACGTGATTCTGCG
GGGAACAAAACGCTCACGCCTGCCAAAGCGAATCCAGACACCGGTCACTC
GAGCGTGGTATTGCCCCCGCCCTCGCCGTCTGCGGGTGCGATATTAAGTG
CAGGGGCTCAAGGGCCGCCAAATCCTTTTGCCCGGCCACCGCCTCCGGGA
GCAGCACCACAGAACAACAGTGCATACAACAATAATAGCAATATAGATAC
GCCAATCTCTGCTCTTCCTAGTCGGTTCGTCTCGGATGCGCTTCTCCCGT
CACCGTCCAGTTTCTTTCCGGAATGGGGCTTTGGGCGGTCTGGACCAGAC
AGCAACATGTTGCCCAGTCCCTTGACGTTCCCTACGCCGGCGGTACAAAG
TGGCCCCGGGTTTGGGCGCGAGGATGAGCAAGACAAAAAGCGCAAAAGCC
CTGATAGTGGACCCAATGCGGAAGGGGTAGTGAAGAAACCAAAGACGTAA
ATGGGTCGCAGAAAGATCGAGATCAAGGCGATCAAGGATGATCGCAACCG
CTCAGTGACCTTTCTGAAACGGAAGGGTGGTCTGTTCAAGAAGGCACATG
AGCTTGCGGTCCTGTGTTCGGTTGATGTCGCTGTTATTATCTTTGGTCAC
AACAAGAAGCTCTACGAATTCTCGTCATGTGATATGCGAGAGGCCCTCAC
TCGATATCAATACTTTGGTCCCCCACATGAACACAAAGGCCCTGAAGACT
TTAACGGCAAACGCGACGATGATGATGACGAAGATGAGACGACGCCTGCC
CCCGAAGATGTGCATCCTACGCCTCCAAATCCTCCCATGATTCCCGCCCA
CCTGCCAGGTCATCCCGGCTTCCAGCACGTCACTCATGCGCCGTCTGCTT
CCCCGCCCATAGGGAATGGGATGGCATTTGCTCCGCGTCACGGTACCCCT
CAACCGCAGGGAGTTTCTCGGCCTTCGTCTCGGAATCATCTTCGTCGGGT
GAGCTCCAATATGGGACCTCAACAGCATCACCATGCGACCCCTCCGCCGC
CTCCGCCGCCGCCGCAAAATGGCTTCACGTACATTCCTAATCCTTCGGTA
TATAACCCCAACGCTGCTCACGCCATGGCTCAACCTCCCCGCCCACCTCA
GTTCACTCATTACGGACCCCCCGGGCCGCATCACCAACCCCCTCCGCCTC
CACAGCATCATCCAGCGATGCCGCCACACTCCATGCCCCCACAGTCTATG
CCTCCACATACAATGGCACCGCAAGCCATGCCGCCGCACCACCAGGCTCC
TCCACACATGCCACACCCGCCTCATGCACTTTCACAGCAACCGCCTCCAA
TGGCCATGACCCAGCCGCCCCATGCCGCCATCCCGCAGGTCGCGCAAGCG
TTTCTCCCAGAGCAAGGACGAAATTCCATGCCTCCGACGTTTACAACAGA
ACAGCAACCACCGCCGCCACGAACAGTGTCGCTTCCTGAAGGAACCGCTC
CGACAGACGCAATGCCAGGTCCCATGAAGACGGAAGGAACCCCATCCCCG
CCGCACCAGCGATCTCTCTCTTCCAAGTCTCGCAGTATCTTCACACCCAT
TGACGACCGAGGCTCCGTATTGGCGCGCCATTTTGGCGTAGGTCCTCCGA
CGGAGGCGGGAGAGAATGCGCAAACGAAGGCTGAAGGAGCAACACTCGGA
CCAAACGAAGGGAAGCCTGCTGGGCTAACTGCAAAGCCCCCTCCTCCACC
TCCCCGAGCGGCCACGGAAGCCCCGCGTCCCCAGCCGGTAGTTGACCTGA
AGCCGCCTGTGCGTACAAACAGCGGCCAGTTCCCGCCTAAGCGCCCGCAG
TTGAAGGTACAGATACCGAGTGAGAATTCGGACCGGGGCAGCGCAACGGC
AGATTCATCGTCACGTGATTCTGCGGGGAACAAAACGCTCACGCCTGCCA
AAGCGAATCCAGACACCGGTCACTCGAGCGTGGTATTGCCCCCGCCCTCG
CCGTCTGCGGGTGCGATATTAAGTGCAGGGGCTCAAGGGCCGCCAAATCC
TTTTGCCCGGCCACCGCCTCCGGGAGCAGCACCACAGAACAACAGTGCAT
ACAACAATAATAGCAATATAGATACGCCAATCTCTGCTCTTCCTAGTCGG
TTCGTCTCGGATGCGCTTCTCCCGTCACCGTCCAGTTTCTTTCCGGAATG
GGGCTTTGGGCGGTCTGGACCAGACAGCAACATGTTGCCCAGTCCCTTGA
CGTTCCCTACGCCGGCGGTACAAAGTGGCCCCGGGTTTGGGCGCGAGGAT
GAGCAAGACAAAAAGCGCAAAAGCCCTGATAGTGGACCCAATGCGGAAGG
GGTAGTGAAGAAACCAAAGACGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0045944 | positive regulation of transcription by RNA polymerase II |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000977 | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
| GO:0003677 | DNA binding |
| GO:0046983 | protein dimerization activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR033896 |
| DBxref | InterPro:IPR036879 |
| DBxref | InterPro:IPR002100 |
| DBxref | PFAM:PF00319 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:2966683..2968714 + |
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