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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:2996891..2997878- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002196-T1 ID=CBS51388_002196-T1|Name=CBS51388_002196-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=988bp|location=Sequence derived from alignment at An02:2996891..2997878- (Aspergillus niger CBS 513.88)
ATGAGCATGGCGTCCCAGTCCGACTTCTTCTCGGCTATGACCAACCGGTC
GCTCCGCAACGTCCGATCGGTAGGATGCCCTCCCCTGTCAGCATCGCTCA
GTAAACGGAGTTGCTCGAGCTGATCTTCAATTATGCACCTTGCTGACATC
CTTCGGTCCACTAGGAACTTGAGTTTCTCGCAGACGCATCAGTCATTACT
CCGCAACAGCTCTCATCCATTCTATCGCAACTACCAAGGGACGATGAACG
CAGCAGAGCCCCCGTGCCTCAGCAGCAGCCACCAGTGCAACAACCACCTG
TCGTCGCCCAGCAGCCCCCTGCCCCATACTCTCCTCCTACGAACCAGTTT
GCAAACACCACCTTGAACGAGAAGGCCACTTATCAGCAGCCTCCTCCGCA
GCAGTACTCAACCCCGCCTGTTCCGCCACCTGCTTATCCCCAAGCTCCAC
CGGTACTGTCTATCGCTTCAGCGCTCTATGCCTACACTCCGACGGACCCC
GGAGACTTGGCTCTGCAACCACACGATCGTATTCAAGTCTTGGAACACAT
GAATGCCGACTGTAAGGCTGTCAATACCCCTTGTGTGCAGCCTCCCTTGC
TAACCGCTGTTTATAGGGTGGCGTGGTCGTAATGAGCGCACCAACCTCGA
GGGTATCTTCCCTCGGAGCTATGTGAACGTGCTGAACGAAAAGGCCGTTT
CGTCTCCTCCCCCGACCAACTATGGAAACATGCCTCTGGAAGTCAGCCAG
AGTGGTTCGACGCCCCCTGGTGAAGAGGGCAAGAAGTCCAAGTTCGAGGA
GCAGGGCAAGAAGTTTGGCAAGAAGATGGGCAATGCCGGTACGTTTAAAG
CGATGCGCATTCGATCGCCATATAGATTGATGCGCCGAACGTCATTAAAT
ATACGGTCAATTTTACTGATAATCACGTCTAGCTATCTTCGGTGCCGGTG
CTACGATGGGTTCGAACATTGTCAACAGCATCTTCTAG back to topCoding sequence (CDS) from alignment at An02:2996891..2997878- >CBS51388_002196-T1 ID=CBS51388_002196-T1|Name=CBS51388_002196-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2976bp|location=Sequence derived from alignment at An02:2996891..2997878- (Aspergillus niger CBS 513.88)
CTATCTTCGGTGCCGGTGCTACGATGGGTTCGAACATTGTCAACAGCATC
TTCTAGGGTGGCGTGGTCGTAATGAGCGCACCAACCTCGAGGGTATCTTC
CCTCGGAGCTATGTGAACGTGCTGAACGAAAAGGCCGTTTCGTCTCCTCC
CCCGACCAACTATGGAAACATGCCTCTGGAAGTCAGCCAGAGTGGTTCGA
CGCCCCCTGGTGAAGAGGGCAAGAAGTCCAAGTTCGAGGAGCAGGGCAAG
AAGTTTGGCAAGAAGATGGGCAATGCCGGAACTTGAGTTTCTCGCAGACG
CATCAGTCATTACTCCGCAACAGCTCTCATCCATTCTATCGCAACTACCA
AGGGACGATGAACGCAGCAGAGCCCCCGTGCCTCAGCAGCAGCCACCAGT
GCAACAACCACCTGTCGTCGCCCAGCAGCCCCCTGCCCCATACTCTCCTC
CTACGAACCAGTTTGCAAACACCACCTTGAACGAGAAGGCCACTTATCAG
CAGCCTCCTCCGCAGCAGTACTCAACCCCGCCTGTTCCGCCACCTGCTTA
TCCCCAAGCTCCACCGGTACTGTCTATCGCTTCAGCGCTCTATGCCTACA
CTCCGACGGACCCCGGAGACTTGGCTCTGCAACCACACGATCGTATTCAA
GTCTTGGAACACATGAATGCCGACTATGAGCATGGCGTCCCAGTCCGACT
TCTTCTCGGCTATGACCAACCGGTCGCTCCGCAACGTCCGATCGCTATCT
TCGGTGCCGGTGCTACGATGGGTTCGAACATTGTCAACAGCATCTTCTAG
GGTGGCGTGGTCGTAATGAGCGCACCAACCTCGAGGGTATCTTCCCTCGG
AGCTATGTGAACGTGCTGAACGAAAAGGCCGTTTCGTCTCCTCCCCCGAC
CAACTATGGAAACATGCCTCTGGAAGTCAGCCAGAGTGGTTCGACGCCCC
CTGGTGAAGAGGGCAAGAAGTCCAAGTTCGAGGAGCAGGGCAAGAAGTTT
GGCAAGAAGATGGGCAATGCCGGAACTTGAGTTTCTCGCAGACGCATCAG
TCATTACTCCGCAACAGCTCTCATCCATTCTATCGCAACTACCAAGGGAC
GATGAACGCAGCAGAGCCCCCGTGCCTCAGCAGCAGCCACCAGTGCAACA
ACCACCTGTCGTCGCCCAGCAGCCCCCTGCCCCATACTCTCCTCCTACGA
ACCAGTTTGCAAACACCACCTTGAACGAGAAGGCCACTTATCAGCAGCCT
CCTCCGCAGCAGTACTCAACCCCGCCTGTTCCGCCACCTGCTTATCCCCA
AGCTCCACCGGTACTGTCTATCGCTTCAGCGCTCTATGCCTACACTCCGA
CGGACCCCGGAGACTTGGCTCTGCAACCACACGATCGTATTCAAGTCTTG
GAACACATGAATGCCGACTATGAGCATGGCGTCCCAGTCCGACTTCTTCT
CGGCTATGACCAACCGGTCGCTCCGCAACGTCCGATCGCTATCTTCGGTG
CCGGTGCTACGATGGGTTCGAACATTGTCAACAGCATCTTCTAGGGTGGC
GTGGTCGTAATGAGCGCACCAACCTCGAGGGTATCTTCCCTCGGAGCTAT
GTGAACGTGCTGAACGAAAAGGCCGTTTCGTCTCCTCCCCCGACCAACTA
TGGAAACATGCCTCTGGAAGTCAGCCAGAGTGGTTCGACGCCCCCTGGTG
AAGAGGGCAAGAAGTCCAAGTTCGAGGAGCAGGGCAAGAAGTTTGGCAAG
AAGATGGGCAATGCCGGAACTTGAGTTTCTCGCAGACGCATCAGTCATTA
CTCCGCAACAGCTCTCATCCATTCTATCGCAACTACCAAGGGACGATGAA
CGCAGCAGAGCCCCCGTGCCTCAGCAGCAGCCACCAGTGCAACAACCACC
TGTCGTCGCCCAGCAGCCCCCTGCCCCATACTCTCCTCCTACGAACCAGT
TTGCAAACACCACCTTGAACGAGAAGGCCACTTATCAGCAGCCTCCTCCG
CAGCAGTACTCAACCCCGCCTGTTCCGCCACCTGCTTATCCCCAAGCTCC
ACCGGTACTGTCTATCGCTTCAGCGCTCTATGCCTACACTCCGACGGACC
CCGGAGACTTGGCTCTGCAACCACACGATCGTATTCAAGTCTTGGAACAC
ATGAATGCCGACTATGAGCATGGCGTCCCAGTCCGACTTCTTCTCGGCTA
TGACCAACCGGTCGCTCCGCAACGTCCGATCGCTATCTTCGGTGCCGGTG
CTACGATGGGTTCGAACATTGTCAACAGCATCTTCTAGGGTGGCGTGGTC
GTAATGAGCGCACCAACCTCGAGGGTATCTTCCCTCGGAGCTATGTGAAC
GTGCTGAACGAAAAGGCCGTTTCGTCTCCTCCCCCGACCAACTATGGAAA
CATGCCTCTGGAAGTCAGCCAGAGTGGTTCGACGCCCCCTGGTGAAGAGG
GCAAGAAGTCCAAGTTCGAGGAGCAGGGCAAGAAGTTTGGCAAGAAGATG
GGCAATGCCGGAACTTGAGTTTCTCGCAGACGCATCAGTCATTACTCCGC
AACAGCTCTCATCCATTCTATCGCAACTACCAAGGGACGATGAACGCAGC
AGAGCCCCCGTGCCTCAGCAGCAGCCACCAGTGCAACAACCACCTGTCGT
CGCCCAGCAGCCCCCTGCCCCATACTCTCCTCCTACGAACCAGTTTGCAA
ACACCACCTTGAACGAGAAGGCCACTTATCAGCAGCCTCCTCCGCAGCAG
TACTCAACCCCGCCTGTTCCGCCACCTGCTTATCCCCAAGCTCCACCGGT
ACTGTCTATCGCTTCAGCGCTCTATGCCTACACTCCGACGGACCCCGGAG
ACTTGGCTCTGCAACCACACGATCGTATTCAAGTCTTGGAACACATGAAT
GCCGACTATGAGCATGGCGTCCCAGTCCGACTTCTTCTCGGCTATGACCA
ACCGGTCGCTCCGCAACGTCCGATCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036028 |
| DBxref | InterPro:IPR001452 |
| DBxref | PFAM:PF14604 |
| DBxref | PFAM:PF07653 |
| DBxref | PFAM:PF00018 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:2996891..2997878 - |
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