CBS51388_002226-T1, CBS51388_002226-T1 (mRNA) Aspergillus niger CBS 513.88

Overview


Name	CBS51388_002226-T1
Unique Name	CBS51388_002226-T1
Type	mRNA
Organism	Aspergillus niger CBS 513.88

Sequences

The following sequences are available for this feature:

mRNA from alignment at An02:3082542..3084036+
coding sequence from alignment at An02:3082542..3084036+

mRNA from alignment at An02:3082542..3084036+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>CBS51388_002226-T1 ID=CBS51388_002226-T1|Name=CBS51388_002226-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1495bp|location=Sequence derived from alignment at An02:3082542..3084036+ (Aspergillus niger CBS 513.88)
ATGCCTAGCGCCACGGGAGAGAACTGGGAGAAGTACAAGAAGAACTTCGC
CGATGACGAAGAGCCAGAGAAGAAGATCACCCCTCTTACAGACGAGTAGG
TGATTCCCGGTGTTTTATCAGCATCGATAGTGGTTGGTTCCCGCATCTGG
ATGGCTAACTGGCCGCAGGGATATCCAAGTATTGAAGACCTACGGTGCCG
CTCCCTACGCCACGGCATTAAAGAAGCTCGAAAAACAGATCAAGGACAGA
CAAGCGAGTGTAAACGAGAAGATTGGCGTCAAGGTATTGAGGTCTGCGAT
ATACGTCATACCGGACACGTCTGACTAGCTGCTTAGGAATCCGATACCGG
TCTTGCGCCTCCACACCTTTGGGATGTTGCTGCGGACCGACAGCGCATGG
CAGAGGAGCAACCGCTGCAGGTAGCTCGTTGTACAAAGATCATTTCGGAT
GAGAAGGACTCGGATAAGAGCAAATATGTTATCAACGTTAAGCAGATCGC
CAAGTTTGTCGTCAACCTTGGGGAACGCGTGAGTCCTACGGATATCGAAG
AGGGCATGAGAGTCGGGTATGACCCTGCAGCTTTGCTATGCATCTTCCCA
TCTAACAGATGACAGTGTCGACCGCAATAAATACCAGATTATGCTACCTC
TCCCTCCCAAGATCGACCCCAGCGTGACGATGATGACTGTCGAGGACAAG
CCCGATGTGACGTACGGCGATGTCGGAGGATGCAAGGAACAAATTGAGAA
GTTGCGAGAAGTCGTCGAGATGCCATTGCTATCGCCAGAGCGCTTCGTTA
ACCTCGGTATCGACCCGCCGAAGGGTGCTCTGCTCTACGGACCTCCCGGA
ACTGGTAAGACACTTTGCGCTCGAGCCGTGGCCAACCGAACCGACGCTAC
GTTCATCCGTGTCATTGGTAGTGAGTTGGTGCAGAAGTATGTTGGTGAGG
GTGCTCGGATGGTCCGTGAGCTTTTCGAGATGGCCCGAACAAAGAAGGCG
TGCATTATCTTCTTCGACGAAATCGATGCGGTCGGCGGTGCTCGTTTCGA
CGACGGAGCGGGTGGTGACAACGAAGTTCAACGTACCATGTTGGAGTTGA
TTACGCAGCTGGATGGTTTCGACGCACGTGGTAACATCAAGGTCATGTTC
GCTACCAACCGACCGTCGACTTTGGACCCTGCCCTGATGCGTCCTGGTCG
TATCGACCGTAAGATCGAGTTCTCGCTCCCGGATGTCGAGGGCCGTGCCA
ACATTCTCCGGATTCACGCCAAGAGCATGTCGGTGGAGCGGGACATTCGG
TGGGAGCTGATTTCGCGTCTGTGCCCGAACGCTACAGGAGCTGAGCTCCG
GAGTGTTGCGACAGAGGCGGGCATGTTTGCTATTCGGGCGCGGCGGAAGG
TGGCCACGGAGAAGGACTTCCTGGCCGCGGTGGACAAGGTGATCAAGGGT
AACCTGAAGTTCAACTCGACGGCGACGTACATGCAGTATAATTAG

Coding sequence (CDS) from alignment at An02:3082542..3084036+

>CBS51388_002226-T1 ID=CBS51388_002226-T1|Name=CBS51388_002226-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5280bp|location=Sequence derived from alignment at An02:3082542..3084036+ (Aspergillus niger CBS 513.88)
ATGCCTAGCGCCACGGGAGAGAACTGGGAGAAGTACAAGAAGAACTTCGC
CGATGACGAAGAGCCAGAGAAGAAGATCACCCCTCTTACAGACGAGGATA
TCCAAGTATTGAAGACCTACGGTGCCGCTCCCTACGCCACGGCATTAAAG
AAGCTCGAAAAACAGATCAAGGACAGACAAGCGAGTGTAAACGAGAAGAT
TGGCGTCAAGGAATCCGATACCGGTCTTGCGCCTCCACACCTTTGGGATG
TTGCTGCGGACCGACAGCGCATGGCAGAGGAGCAACCGCTGCAGGTAGCT
CGTTGTACAAAGATCATTTCGGATGAGAAGGACTCGGATAAGAGCAAATA
TGTTATCAACGTTAAGCAGATCGCCAAGTTTGTCGTCAACCTTGGGGAAC
GCGTGAGTCCTACGGATATCGAAGAGGGCATGAGAGTCGGTGTCGACCGC
AATAAATACCAGATTATGCTACCTCTCCCTCCCAAGATCGACCCCAGCGT
GACGATGATGACTGTCGAGGACAAGCCCGATGTGACGTACGGCGATGTCG
GAGGATGCAAGGAACAAATTGAGAAGTTGCGAGAAGTCGTCGAGATGCCA
TTGCTATCGCCAGAGCGCTTCGTTAACCTCGGTATCGACCCGCCGAAGGG
TGCTCTGCTCTACGGACCTCCCGGAACTGGTAAGACACTTTGCGCTCGAG
CCGTGGCCAACCGAACCGACGCTACGTTCATCCGTGTCATTGGTAGTGAG
TTGGTGCAGAAGTATGTTGGTGAGGGTGCTCGGATGGTCCGTGAGCTTTT
CGAGATGGCCCGAACAAAGAAGGCGTGCATTATCTTCTTCGACGAAATCG
ATGCGGTCGGCGGTGCTCGTTTCGACGACGGAGCGGGTGGTGACAACGAA
GTTCAACGTACCATGTTGGAGTTGATTACGCAGCTGGATGGTTTCGACGC
ACGTGGTAACATCAAGGTCATGTTCGCTACCAACCGACCGTCGACTTTGG
ACCCTGCCCTGATGCGTCCTGGTCGTATCGACCGTAAGATCGAGTTCTCG
CTCCCGGATGTCGAGGGCCGTGCCAACATTCTCCGGATTCACGCCAAGAG
CATGTCGGTGGAGCGGGACATTCGGTGGGAGCTGATTTCGCGTCTGTGCC
CGAACGCTACAGGAGCTGAGCTCCGGAGTGTTGCGACAGAGGCGGGCATG
TTTGCTATTCGGGCGCGGCGGAAGGTGGCCACGGAGAAGGACTTCCTGGC
CGCGGTGGACAAGGTGATCAAGGGTAACCTGAAGTTCAACTCGACGGCGA
CGTACATGCAGTATAATTAGATGCCTAGCGCCACGGGAGAGAACTGGGAG
AAGTACAAGAAGAACTTCGCCGATGACGAAGAGCCAGAGAAGAAGATCAC
CCCTCTTACAGACGAGGATATCCAAGTATTGAAGACCTACGGTGCCGCTC
CCTACGCCACGGCATTAAAGAAGCTCGAAAAACAGATCAAGGACAGACAA
GCGAGTGTAAACGAGAAGATTGGCGTCAAGGAATCCGATACCGGTCTTGC
GCCTCCACACCTTTGGGATGTTGCTGCGGACCGACAGCGCATGGCAGAGG
AGCAACCGCTGCAGGTAGCTCGTTGTACAAAGATCATTTCGGATGAGAAG
GACTCGGATAAGAGCAAATATGTTATCAACGTTAAGCAGATCGCCAAGTT
TGTCGTCAACCTTGGGGAACGCGTGAGTCCTACGGATATCGAAGAGGGCA
TGAGAGTCGGTGTCGACCGCAATAAATACCAGATTATGCTACCTCTCCCT
CCCAAGATCGACCCCAGCGTGACGATGATGACTGTCGAGGACAAGCCCGA
TGTGACGTACGGCGATGTCGGAGGATGCAAGGAACAAATTGAGAAGTTGC
GAGAAGTCGTCGAGATGCCATTGCTATCGCCAGAGCGCTTCGTTAACCTC
GGTATCGACCCGCCGAAGGGTGCTCTGCTCTACGGACCTCCCGGAACTGG
TAAGACACTTTGCGCTCGAGCCGTGGCCAACCGAACCGACGCTACGTTCA
TCCGTGTCATTGGTAGTGAGTTGGTGCAGAAGTATGTTGGTGAGGGTGCT
CGGATGGTCCGTGAGCTTTTCGAGATGGCCCGAACAAAGAAGGCGTGCAT
TATCTTCTTCGACGAAATCGATGCGGTCGGCGGTGCTCGTTTCGACGACG
GAGCGGGTGGTGACAACGAAGTTCAACGTACCATGTTGGAGTTGATTACG
CAGCTGGATGGTTTCGACGCACGTGGTAACATCAAGGTCATGTTCGCTAC
CAACCGACCGTCGACTTTGGACCCTGCCCTGATGCGTCCTGGTCGTATCG
ACCGTAAGATCGAGTTCTCGCTCCCGGATGTCGAGGGCCGTGCCAACATT
CTCCGGATTCACGCCAAGAGCATGTCGGTGGAGCGGGACATTCGGTGGGA
GCTGATTTCGCGTCTGTGCCCGAACGCTACAGGAGCTGAGCTCCGGAGTG
TTGCGACAGAGGCGGGCATGTTTGCTATTCGGGCGCGGCGGAAGGTGGCC
ACGGAGAAGGACTTCCTGGCCGCGGTGGACAAGGTGATCAAGGGTAACCT
GAAGTTCAACTCGACGGCGACGTACATGCAGTATAATTAGATGCCTAGCG
CCACGGGAGAGAACTGGGAGAAGTACAAGAAGAACTTCGCCGATGACGAA
GAGCCAGAGAAGAAGATCACCCCTCTTACAGACGAGGATATCCAAGTATT
GAAGACCTACGGTGCCGCTCCCTACGCCACGGCATTAAAGAAGCTCGAAA
AACAGATCAAGGACAGACAAGCGAGTGTAAACGAGAAGATTGGCGTCAAG
GAATCCGATACCGGTCTTGCGCCTCCACACCTTTGGGATGTTGCTGCGGA
CCGACAGCGCATGGCAGAGGAGCAACCGCTGCAGGTAGCTCGTTGTACAA
AGATCATTTCGGATGAGAAGGACTCGGATAAGAGCAAATATGTTATCAAC
GTTAAGCAGATCGCCAAGTTTGTCGTCAACCTTGGGGAACGCGTGAGTCC
TACGGATATCGAAGAGGGCATGAGAGTCGGTGTCGACCGCAATAAATACC
AGATTATGCTACCTCTCCCTCCCAAGATCGACCCCAGCGTGACGATGATG
ACTGTCGAGGACAAGCCCGATGTGACGTACGGCGATGTCGGAGGATGCAA
GGAACAAATTGAGAAGTTGCGAGAAGTCGTCGAGATGCCATTGCTATCGC
CAGAGCGCTTCGTTAACCTCGGTATCGACCCGCCGAAGGGTGCTCTGCTC
TACGGACCTCCCGGAACTGGTAAGACACTTTGCGCTCGAGCCGTGGCCAA
CCGAACCGACGCTACGTTCATCCGTGTCATTGGTAGTGAGTTGGTGCAGA
AGTATGTTGGTGAGGGTGCTCGGATGGTCCGTGAGCTTTTCGAGATGGCC
CGAACAAAGAAGGCGTGCATTATCTTCTTCGACGAAATCGATGCGGTCGG
CGGTGCTCGTTTCGACGACGGAGCGGGTGGTGACAACGAAGTTCAACGTA
CCATGTTGGAGTTGATTACGCAGCTGGATGGTTTCGACGCACGTGGTAAC
ATCAAGGTCATGTTCGCTACCAACCGACCGTCGACTTTGGACCCTGCCCT
GATGCGTCCTGGTCGTATCGACCGTAAGATCGAGTTCTCGCTCCCGGATG
TCGAGGGCCGTGCCAACATTCTCCGGATTCACGCCAAGAGCATGTCGGTG
GAGCGGGACATTCGGTGGGAGCTGATTTCGCGTCTGTGCCCGAACGCTAC
AGGAGCTGAGCTCCGGAGTGTTGCGACAGAGGCGGGCATGTTTGCTATTC
GGGCGCGGCGGAAGGTGGCCACGGAGAAGGACTTCCTGGCCGCGGTGGAC
AAGGTGATCAAGGGTAACCTGAAGTTCAACTCGACGGCGACGTACATGCA
GTATAATTAGATGCCTAGCGCCACGGGAGAGAACTGGGAGAAGTACAAGA
AGAACTTCGCCGATGACGAAGAGCCAGAGAAGAAGATCACCCCTCTTACA
GACGAGGATATCCAAGTATTGAAGACCTACGGTGCCGCTCCCTACGCCAC
GGCATTAAAGAAGCTCGAAAAACAGATCAAGGACAGACAAGCGAGTGTAA
ACGAGAAGATTGGCGTCAAGGAATCCGATACCGGTCTTGCGCCTCCACAC
CTTTGGGATGTTGCTGCGGACCGACAGCGCATGGCAGAGGAGCAACCGCT
GCAGGTAGCTCGTTGTACAAAGATCATTTCGGATGAGAAGGACTCGGATA
AGAGCAAATATGTTATCAACGTTAAGCAGATCGCCAAGTTTGTCGTCAAC
CTTGGGGAACGCGTGAGTCCTACGGATATCGAAGAGGGCATGAGAGTCGG
TGTCGACCGCAATAAATACCAGATTATGCTACCTCTCCCTCCCAAGATCG
ACCCCAGCGTGACGATGATGACTGTCGAGGACAAGCCCGATGTGACGTAC
GGCGATGTCGGAGGATGCAAGGAACAAATTGAGAAGTTGCGAGAAGTCGT
CGAGATGCCATTGCTATCGCCAGAGCGCTTCGTTAACCTCGGTATCGACC
CGCCGAAGGGTGCTCTGCTCTACGGACCTCCCGGAACTGGTAAGACACTT
TGCGCTCGAGCCGTGGCCAACCGAACCGACGCTACGTTCATCCGTGTCAT
TGGTAGTGAGTTGGTGCAGAAGTATGTTGGTGAGGGTGCTCGGATGGTCC
GTGAGCTTTTCGAGATGGCCCGAACAAAGAAGGCGTGCATTATCTTCTTC
GACGAAATCGATGCGGTCGGCGGTGCTCGTTTCGACGACGGAGCGGGTGG
TGACAACGAAGTTCAACGTACCATGTTGGAGTTGATTACGCAGCTGGATG
GTTTCGACGCACGTGGTAACATCAAGGTCATGTTCGCTACCAACCGACCG
TCGACTTTGGACCCTGCCCTGATGCGTCCTGGTCGTATCGACCGTAAGAT
CGAGTTCTCGCTCCCGGATGTCGAGGGCCGTGCCAACATTCTCCGGATTC
ACGCCAAGAGCATGTCGGTGGAGCGGGACATTCGGTGGGAGCTGATTTCG
CGTCTGTGCCCGAACGCTACAGGAGCTGAGCTCCGGAGTGTTGCGACAGA
GGCGGGCATGTTTGCTATTCGGGCGCGGCGGAAGGTGGCCACGGAGAAGG
ACTTCCTGGCCGCGGTGGACAAGGTGATCAAGGGTAACCTGAAGTTCAAC
TCGACGGCGACGTACATGCAGTATAATTAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **Biological Process**
Term	Definition
GO:0030163	protein catabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0016787	hydrolase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
RPT1	CBS51388_002226	Aspergillus niger CBS 513.88	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_002226-T1.exon1	CBS51388_002226-T1.exon1	Aspergillus niger CBS 513.88	exon
CBS51388_002226-T1.exon2	CBS51388_002226-T1.exon2	Aspergillus niger CBS 513.88	exon
CBS51388_002226-T1.exon3	CBS51388_002226-T1.exon3	Aspergillus niger CBS 513.88	exon
CBS51388_002226-T1.exon4	CBS51388_002226-T1.exon4	Aspergillus niger CBS 513.88	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_002226-T1.cds	CBS51388_002226-T1.cds	Aspergillus niger CBS 513.88	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_002226-T1	CBS51388_002226-T1-protein	Aspergillus niger CBS 513.88	polypeptide

Properties


Property Name	Value
DBxref	InterPro:IPR027417
DBxref	InterPro:IPR003960
DBxref	InterPro:IPR003959
DBxref	InterPro:IPR005937
DBxref	InterPro:IPR003593
DBxref	PFAM:PF00004
Product	26S proteasome regulatory subunit 7

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger CBS 513.88 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
An02	supercontig	An02:3082542..3084036 +

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CBS51388_002226-T1, CBS51388_002226-T1 (mRNA) Aspergillus niger CBS 513.88

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CBS51388_002226-T1, CBS51388_002226-T1 (mRNA) Aspergillus niger CBS 513.88