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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:3157419..3159440- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002253-T1 ID=CBS51388_002253-T1|Name=CBS51388_002253-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2022bp|location=Sequence derived from alignment at An02:3157419..3159440- (Aspergillus niger CBS 513.88)
ATGCTGCTCAAACCCGCCACTCCCCTCACCATCCTCCTCCTGATCGCATT
TGCGCTTCTCCTTATCTCTGTCATTTCCACCCCTATCGTCAAAAGCATTG
CGCTTGCGAGACATGATAACATTGACTATGGCGTGTTCGGATACTGCAAA
GGCGATGTGTGCACCAGCATTCATGTTGGTTACGCCGACGGTTCGTTGCC
CTCTTGTGCTTTTGTTACCAATCTCATGAGGACCGCTAAATTCCTGACTT
GAATCGCAGCTGACTCTAGTTCAGATGACATAACTTCCGAAGACGGTACA
TTTAGCATTGCACCTGGCACCCGCAGATCGCTCTCAGCAATTCTGATCGT
CCATCCCGTCGCTGCGTTCCTCACACTCGTATGCCTATGCATGGCCGCAG
CGGCTCATTTTCACTCACCGTCGCATTCGCCCCGCTATTTGCTAGCCTTG
TTGATCCTACTGCTTCCTACTCTTCTCGTGTCACTCCTCGCGTTCCTGGT
CGATATTCTCTTGTTTGTACCGCACATGGCCTGGGCAGGATGGATTGTAT
TAGTTGCCACCATTTTACTTGTCACTTGCGGCGTAGTTACATGTGCAATG
CGGCGGACACTCGTGAGCCGCAAGGCAAGGAAGAAGCGGATCAACGAAAA
TGCTGAAATGAGCGGGGAGAACTTCTACAACCGCCAGAACGCAGCGGCGG
CGGCAGCAGCAGCAGCGAACCTGGATACAAAGGAGCCTGTGATAACTGGG
TCTTCGCCTTCATCCGAGACGGGCCCTACATTTGCTACTTTCCGTACGAC
TACACACGACAGTGATGACGATCGCACGCCACTGAACTCACGGACTGTTC
ATCCTGACCCTCCAATGCCCGATAACCAGTACACCCGGGCGCGGAGAGAT
GTGGCAGCCTATAACTCTCCGCCTGATGATGCTGGTGTTCCTGGTCCGCA
AGCTCCACCATCCGATCCTCGTTTGCGCAATCAGTATTCCGACGGCAGTG
TCGGCTCGCGGAGAGGGGCCCCTCCGCCAGGGTTTGCGCGCGGACGGGGT
GGTTATCCACCTCGAGGGGCTTATGGCCGTGGGGGGCCTTATAGAGGACC
ACCCCGGGGCCCGCCTCCTCCGGGTGCAAACGGTGCCCCAATGGGTCCCA
TGCGAGGTGGACATCCCGGAATGATGGGACGAGGATACCGAGGACCCCCT
CCGGGTGATTACATGCCTGGGCCCGTTCCTAGGCCAACTCCGCCGCCTGA
AGATGAGTACGGCTATCACCACCCACCGCCCGTCGCTCGACAGCCGTCCC
CTGGGCCAATTGGAATGGCAGTATCTCCCGATCATGGTAGCCCAATCGGC
CAGGCTATCGAAATGCAACCACAGCCACGACGAATGGGCTCTCATGAATC
GCATGAAGCGCACCTCGAACCCCAGCCACATGCGCTGTCAGCAGATGGCT
ATCCGGAGCCTATCAGTCCTTCAAGCCTCTATAGTCGGACAGCGTAAGCT
GTGTATCCTCTCTAACCTTGTGTTTGAATGCTAACGGTCTTTAGATCATA
TATTCCTCCGCGTGCCGGTTGGGCTCCAGAAGAACCGCGGACCGGCCCCT
CGTCCTCGCCTGTCCATGCGTATGAAGGGCCACGACAACATGCTCGAACT
CCTTCAACGGACTATTTTGAAGATGCAGACCCTCGGTTTGCTACCAACGA
GTCGGCGGCAGGCAACCCTCGGTTGCCGGCTGTCTTGACACCAGGTGCTA
CTGGTGAGAGGAAACCGATGGAAGATATGGCTGAAGGACCCAGCTCACCG
ACTACTAGCGAAGTAAGCCACTTTACATCAATATCTGAGCGGCCTATCAA
TCCCCGCTGGCGGCCACCTCCCGTTCCAGCGCAGCGGAAGCATGATGTTC
TCCTAGAGAACAATCCCGACTTTGACTTGCGGGCAGGTACTGGGCGGGGA
GGAGCTGCTGGTGTTGGTAGTCGTATGCCACCAATGTCGATACCCCGAGA
TGCGGCAAGATACCCCATTTGA back to topCoding sequence (CDS) from alignment at An02:3157419..3159440- >CBS51388_002253-T1 ID=CBS51388_002253-T1|Name=CBS51388_002253-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5661bp|location=Sequence derived from alignment at An02:3157419..3159440- (Aspergillus niger CBS 513.88)
ATCATATATTCCTCCGCGTGCCGGTTGGGCTCCAGAAGAACCGCGGACCG
GCCCCTCGTCCTCGCCTGTCCATGCGTATGAAGGGCCACGACAACATGCT
CGAACTCCTTCAACGGACTATTTTGAAGATGCAGACCCTCGGTTTGCTAC
CAACGAGTCGGCGGCAGGCAACCCTCGGTTGCCGGCTGTCTTGACACCAG
GTGCTACTGGTGAGAGGAAACCGATGGAAGATATGGCTGAAGGACCCAGC
TCACCGACTACTAGCGAAGTAAGCCACTTTACATCAATATCTGAGCGGCC
TATCAATCCCCGCTGGCGGCCACCTCCCGTTCCAGCGCAGCGGAAGCATG
ATGTTCTCCTAGAGAACAATCCCGACTTTGACTTGCGGGCAGGTACTGGG
CGGGGAGGAGCTGCTGGTGTTGGTAGTCGTATGCCACCAATGTCGATACC
CCGAGATGCGGCAAGATACCCCATTTGAATGACATAACTTCCGAAGACGG
TACATTTAGCATTGCACCTGGCACCCGCAGATCGCTCTCAGCAATTCTGA
TCGTCCATCCCGTCGCTGCGTTCCTCACACTCGTATGCCTATGCATGGCC
GCAGCGGCTCATTTTCACTCACCGTCGCATTCGCCCCGCTATTTGCTAGC
CTTGTTGATCCTACTGCTTCCTACTCTTCTCGTGTCACTCCTCGCGTTCC
TGGTCGATATTCTCTTGTTTGTACCGCACATGGCCTGGGCAGGATGGATT
GTATTAGTTGCCACCATTTTACTTGTCACTTGCGGCGTAGTTACATGTGC
AATGCGGCGGACACTCGTGAGCCGCAAGGCAAGGAAGAAGCGGATCAACG
AAAATGCTGAAATGAGCGGGGAGAACTTCTACAACCGCCAGAACGCAGCG
GCGGCGGCAGCAGCAGCAGCGAACCTGGATACAAAGGAGCCTGTGATAAC
TGGGTCTTCGCCTTCATCCGAGACGGGCCCTACATTTGCTACTTTCCGTA
CGACTACACACGACAGTGATGACGATCGCACGCCACTGAACTCACGGACT
GTTCATCCTGACCCTCCAATGCCCGATAACCAGTACACCCGGGCGCGGAG
AGATGTGGCAGCCTATAACTCTCCGCCTGATGATGCTGGTGTTCCTGGTC
CGCAAGCTCCACCATCCGATCCTCGTTTGCGCAATCAGTATTCCGACGGC
AGTGTCGGCTCGCGGAGAGGGGCCCCTCCGCCAGGGTTTGCGCGCGGACG
GGGTGGTTATCCACCTCGAGGGGCTTATGGCCGTGGGGGGCCTTATAGAG
GACCACCCCGGGGCCCGCCTCCTCCGGGTGCAAACGGTGCCCCAATGGGT
CCCATGCGAGGTGGACATCCCGGAATGATGGGACGAGGATACCGAGGACC
CCCTCCGGGTGATTACATGCCTGGGCCCGTTCCTAGGCCAACTCCGCCGC
CTGAAGATGAGTACGGCTATCACCACCCACCGCCCGTCGCTCGACAGCCG
TCCCCTGGGCCAATTGGAATGGCAGTATCTCCCGATCATGGTAGCCCAAT
CGGCCAGGCTATCGAAATGCAACCACAGCCACGACGAATGGGCTCTCATG
AATCGCATGAAGCGCACCTCGAACCCCAGCCACATGCGCTGTCAGCAGAT
GGCTATCCGGAGCCTATCAGTCCTTCAAGCCTCTATAGTCGGACAGCATG
CTGCTCAAACCCGCCACTCCCCTCACCATCCTCCTCCTGATCGCATTTGC
GCTTCTCCTTATCTCTGTCATTTCCACCCCTATCGTCAAAAGCATTGCGC
TTGCGAGACATGATAACATTGACTATGGCGTGTTCGGATACTGCAAAGGC
GATGTGTGCACCAGCATTCATGTTGGTTACGCCGACGATCATATATTCCT
CCGCGTGCCGGTTGGGCTCCAGAAGAACCGCGGACCGGCCCCTCGTCCTC
GCCTGTCCATGCGTATGAAGGGCCACGACAACATGCTCGAACTCCTTCAA
CGGACTATTTTGAAGATGCAGACCCTCGGTTTGCTACCAACGAGTCGGCG
GCAGGCAACCCTCGGTTGCCGGCTGTCTTGACACCAGGTGCTACTGGTGA
GAGGAAACCGATGGAAGATATGGCTGAAGGACCCAGCTCACCGACTACTA
GCGAAGTAAGCCACTTTACATCAATATCTGAGCGGCCTATCAATCCCCGC
TGGCGGCCACCTCCCGTTCCAGCGCAGCGGAAGCATGATGTTCTCCTAGA
GAACAATCCCGACTTTGACTTGCGGGCAGGTACTGGGCGGGGAGGAGCTG
CTGGTGTTGGTAGTCGTATGCCACCAATGTCGATACCCCGAGATGCGGCA
AGATACCCCATTTGAATGACATAACTTCCGAAGACGGTACATTTAGCATT
GCACCTGGCACCCGCAGATCGCTCTCAGCAATTCTGATCGTCCATCCCGT
CGCTGCGTTCCTCACACTCGTATGCCTATGCATGGCCGCAGCGGCTCATT
TTCACTCACCGTCGCATTCGCCCCGCTATTTGCTAGCCTTGTTGATCCTA
CTGCTTCCTACTCTTCTCGTGTCACTCCTCGCGTTCCTGGTCGATATTCT
CTTGTTTGTACCGCACATGGCCTGGGCAGGATGGATTGTATTAGTTGCCA
CCATTTTACTTGTCACTTGCGGCGTAGTTACATGTGCAATGCGGCGGACA
CTCGTGAGCCGCAAGGCAAGGAAGAAGCGGATCAACGAAAATGCTGAAAT
GAGCGGGGAGAACTTCTACAACCGCCAGAACGCAGCGGCGGCGGCAGCAG
CAGCAGCGAACCTGGATACAAAGGAGCCTGTGATAACTGGGTCTTCGCCT
TCATCCGAGACGGGCCCTACATTTGCTACTTTCCGTACGACTACACACGA
CAGTGATGACGATCGCACGCCACTGAACTCACGGACTGTTCATCCTGACC
CTCCAATGCCCGATAACCAGTACACCCGGGCGCGGAGAGATGTGGCAGCC
TATAACTCTCCGCCTGATGATGCTGGTGTTCCTGGTCCGCAAGCTCCACC
ATCCGATCCTCGTTTGCGCAATCAGTATTCCGACGGCAGTGTCGGCTCGC
GGAGAGGGGCCCCTCCGCCAGGGTTTGCGCGCGGACGGGGTGGTTATCCA
CCTCGAGGGGCTTATGGCCGTGGGGGGCCTTATAGAGGACCACCCCGGGG
CCCGCCTCCTCCGGGTGCAAACGGTGCCCCAATGGGTCCCATGCGAGGTG
GACATCCCGGAATGATGGGACGAGGATACCGAGGACCCCCTCCGGGTGAT
TACATGCCTGGGCCCGTTCCTAGGCCAACTCCGCCGCCTGAAGATGAGTA
CGGCTATCACCACCCACCGCCCGTCGCTCGACAGCCGTCCCCTGGGCCAA
TTGGAATGGCAGTATCTCCCGATCATGGTAGCCCAATCGGCCAGGCTATC
GAAATGCAACCACAGCCACGACGAATGGGCTCTCATGAATCGCATGAAGC
GCACCTCGAACCCCAGCCACATGCGCTGTCAGCAGATGGCTATCCGGAGC
CTATCAGTCCTTCAAGCCTCTATAGTCGGACAGCATGCTGCTCAAACCCG
CCACTCCCCTCACCATCCTCCTCCTGATCGCATTTGCGCTTCTCCTTATC
TCTGTCATTTCCACCCCTATCGTCAAAAGCATTGCGCTTGCGAGACATGA
TAACATTGACTATGGCGTGTTCGGATACTGCAAAGGCGATGTGTGCACCA
GCATTCATGTTGGTTACGCCGACGATCATATATTCCTCCGCGTGCCGGTT
GGGCTCCAGAAGAACCGCGGACCGGCCCCTCGTCCTCGCCTGTCCATGCG
TATGAAGGGCCACGACAACATGCTCGAACTCCTTCAACGGACTATTTTGA
AGATGCAGACCCTCGGTTTGCTACCAACGAGTCGGCGGCAGGCAACCCTC
GGTTGCCGGCTGTCTTGACACCAGGTGCTACTGGTGAGAGGAAACCGATG
GAAGATATGGCTGAAGGACCCAGCTCACCGACTACTAGCGAAGTAAGCCA
CTTTACATCAATATCTGAGCGGCCTATCAATCCCCGCTGGCGGCCACCTC
CCGTTCCAGCGCAGCGGAAGCATGATGTTCTCCTAGAGAACAATCCCGAC
TTTGACTTGCGGGCAGGTACTGGGCGGGGAGGAGCTGCTGGTGTTGGTAG
TCGTATGCCACCAATGTCGATACCCCGAGATGCGGCAAGATACCCCATTT
GAATGACATAACTTCCGAAGACGGTACATTTAGCATTGCACCTGGCACCC
GCAGATCGCTCTCAGCAATTCTGATCGTCCATCCCGTCGCTGCGTTCCTC
ACACTCGTATGCCTATGCATGGCCGCAGCGGCTCATTTTCACTCACCGTC
GCATTCGCCCCGCTATTTGCTAGCCTTGTTGATCCTACTGCTTCCTACTC
TTCTCGTGTCACTCCTCGCGTTCCTGGTCGATATTCTCTTGTTTGTACCG
CACATGGCCTGGGCAGGATGGATTGTATTAGTTGCCACCATTTTACTTGT
CACTTGCGGCGTAGTTACATGTGCAATGCGGCGGACACTCGTGAGCCGCA
AGGCAAGGAAGAAGCGGATCAACGAAAATGCTGAAATGAGCGGGGAGAAC
TTCTACAACCGCCAGAACGCAGCGGCGGCGGCAGCAGCAGCAGCGAACCT
GGATACAAAGGAGCCTGTGATAACTGGGTCTTCGCCTTCATCCGAGACGG
GCCCTACATTTGCTACTTTCCGTACGACTACACACGACAGTGATGACGAT
CGCACGCCACTGAACTCACGGACTGTTCATCCTGACCCTCCAATGCCCGA
TAACCAGTACACCCGGGCGCGGAGAGATGTGGCAGCCTATAACTCTCCGC
CTGATGATGCTGGTGTTCCTGGTCCGCAAGCTCCACCATCCGATCCTCGT
TTGCGCAATCAGTATTCCGACGGCAGTGTCGGCTCGCGGAGAGGGGCCCC
TCCGCCAGGGTTTGCGCGCGGACGGGGTGGTTATCCACCTCGAGGGGCTT
ATGGCCGTGGGGGGCCTTATAGAGGACCACCCCGGGGCCCGCCTCCTCCG
GGTGCAAACGGTGCCCCAATGGGTCCCATGCGAGGTGGACATCCCGGAAT
GATGGGACGAGGATACCGAGGACCCCCTCCGGGTGATTACATGCCTGGGC
CCGTTCCTAGGCCAACTCCGCCGCCTGAAGATGAGTACGGCTATCACCAC
CCACCGCCCGTCGCTCGACAGCCGTCCCCTGGGCCAATTGGAATGGCAGT
ATCTCCCGATCATGGTAGCCCAATCGGCCAGGCTATCGAAATGCAACCAC
AGCCACGACGAATGGGCTCTCATGAATCGCATGAAGCGCACCTCGAACCC
CAGCCACATGCGCTGTCAGCAGATGGCTATCCGGAGCCTATCAGTCCTTC
AAGCCTCTATAGTCGGACAGCATGCTGCTCAAACCCGCCACTCCCCTCAC
CATCCTCCTCCTGATCGCATTTGCGCTTCTCCTTATCTCTGTCATTTCCA
CCCCTATCGTCAAAAGCATTGCGCTTGCGAGACATGATAACATTGACTAT
GGCGTGTTCGGATACTGCAAAGGCGATGTGTGCACCAGCATTCATGTTGG
TTACGCCGACG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005886 | plasma membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009571 |
| DBxref | PFAM:PF06687 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:3157419..3159440 - |
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