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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:3173706..3175418+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002257-T1 ID=CBS51388_002257-T1|Name=CBS51388_002257-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1713bp|location=Sequence derived from alignment at An02:3173706..3175418+ (Aspergillus niger CBS 513.88)
ATGGTATACGGCGGGAAGCCAAGTACTGGGTGCCAGAACTGTCGCAAACG
ACGCATCAAGGTATGCTGCATCGGCGAATCGAATAGCGAAATGCTAATAG
TGTAGTGCGATGAAACTCGTCCGCACTGCCGAGCATGTGTTCGGACAGGC
CGGACATGTCCTGGCTATCCCGACCCTTTTGATGTCATGTTAAGAGACCA
AGTAGCGTTCCACCGCAAGAAGCGACACACATCTAGTAAGGTCTCCACTC
CGAAGATCGAAGTGGAGTCAATTCGATCTTCACCTGCTCCGGTAGTATCC
AACGATGCTTTGATTAGCACCAGGCCTAGCGCAGATCTCTCGCAGACGGG
ATCGGTACTGCGCACTGCGCAGCAAGAGGTCCCAAGAGGGTTGGCTCTAC
CAACTGACGATACTGTGACTGCGATGTTCTTCAATTCGTACATCTACTCG
CCTAGAGATCCGCTGATTTTGCGGGGTTTCATGGATATCTTGCCTGATGT
CTTCTGCTATACTCAGCCTGGCTCTCATTTGCATGTCGGCACTTTGGCCG
TGTCGTACTTTTCGGTGGCTGCCTGGACGGGGAATCGCTCTTTTCTCCAG
TCAGCGCAGCAGTTGTTTGTGAAGGCTGTCGCCAAGACTAGGGAAGCGTT
ACAGGGTGACATTACTCATAATGTGGATGATATTCTGATGACCATTCTTC
TTTTGTCTACTTATGAGGTATGTCAACACGCTATTTTCTGTTGGATAATA
GCTAATGTGCGGTAGGAGTTCTGCGCTATCAAAGAAAATAGACCGTCAAG
AAGGACCCATTTGCGAGGTGCTGTTGCTCTGGTGAACAGCAAACGGCCTG
AGCAGCGATCGTCGATTATATCATTGATCTTAGAGAATGCGGTCCAGGTA
CAGCTGGTATGTATCGTGATCTTTTAGACAACCATATACTAACCAGGACA
GATCAAATCATCAAAAGGTCTGGCCTATCCCACAATGCAGACGCCAAATC
AATGGCCCCCGTCTGCACCCGTTCCACAGTCAGCATCGTCACAGCTATTA
ACGATCACCTCCGAGCTGGTCAGTCTCCGACAAGCATGGGATAGATTCAA
CGAAGAAGGAACAAACCATGTCCATGACATCCAGGAGATCCTCTCACGGG
CCTACAGCCTGGACGCGAATCTAGAAGCTTGGAAATACGCACTCCCTGAA
CACTGGAAACCATTGCCTGCGGTCTATGTTCCCCAGTCCGTGCGGGAAGC
CGGCATGTACAAAAACCGCTGCGACTGCTACACCGACCTCTGGATGGCAG
GGACATGGAACTTTTACCGGGATTCCCGGATAGTCGTCCAAAATATCATA
CTTCGCTGTTTGCGGATCCTACCTGATGGTGTGATGCTGGAGCATATACA
GGAGACTATTAACCTGATTGAGACTCTTGCTCTGGATATCTGCGCCACCG
TGCCGTACATCCTTGGCAGCCAGACGATGTCAGTGCATGTTAGTGGGCAA
AAAATCGAGTATCCGGAAGCCGATGGACGGCGGGTGACGACGCCTCATTA
TCCGACTGCTGCGCTTGTGGGGGGATGGATGGTATCGTCTCACTTGTCGA
ATCTAGAATTGCTGTGTCTGAGTGAGGAGATGAATACATGGATTCGGGCG
CAGAAGGAGCGAGTACTGCAGATATATACGTTTGGGGGAAACGGCAGTCA
GATAAGCATGTAA back to topCoding sequence (CDS) from alignment at An02:3173706..3175418+ >CBS51388_002257-T1 ID=CBS51388_002257-T1|Name=CBS51388_002257-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6300bp|location=Sequence derived from alignment at An02:3173706..3175418+ (Aspergillus niger CBS 513.88)
ATGGTATACGGCGGGAAGCCAAGTACTGGGTGCCAGAACTGTCGCAAACG
ACGCATCAAGTGCGATGAAACTCGTCCGCACTGCCGAGCATGTGTTCGGA
CAGGCCGGACATGTCCTGGCTATCCCGACCCTTTTGATGTCATGTTAAGA
GACCAAGTAGCGTTCCACCGCAAGAAGCGACACACATCTAGTAAGGTCTC
CACTCCGAAGATCGAAGTGGAGTCAATTCGATCTTCACCTGCTCCGGTAG
TATCCAACGATGCTTTGATTAGCACCAGGCCTAGCGCAGATCTCTCGCAG
ACGGGATCGGTACTGCGCACTGCGCAGCAAGAGGTCCCAAGAGGGTTGGC
TCTACCAACTGACGATACTGTGACTGCGATGTTCTTCAATTCGTACATCT
ACTCGCCTAGAGATCCGCTGATTTTGCGGGGTTTCATGGATATCTTGCCT
GATGTCTTCTGCTATACTCAGCCTGGCTCTCATTTGCATGTCGGCACTTT
GGCCGTGTCGTACTTTTCGGTGGCTGCCTGGACGGGGAATCGCTCTTTTC
TCCAGTCAGCGCAGCAGTTGTTTGTGAAGGCTGTCGCCAAGACTAGGGAA
GCGTTACAGGGTGACATTACTCATAATGTGGATGATATTCTGATGACCAT
TCTTCTTTTGTCTACTTATGAGGAGTTCTGCGCTATCAAAGAAAATAGAC
CGTCAAGAAGGACCCATTTGCGAGGTGCTGTTGCTCTGGTGAACAGCAAA
CGGCCTGAGCAGCGATCGTCGATTATATCATTGATCTTAGAGAATGCGGT
CCAGGTACAGCTGATCAAATCATCAAAAGGTCTGGCCTATCCCACAATGC
AGACGCCAAATCAATGGCCCCCGTCTGCACCCGTTCCACAGTCAGCATCG
TCACAGCTATTAACGATCACCTCCGAGCTGGTCAGTCTCCGACAAGCATG
GGATAGATTCAACGAAGAAGGAACAAACCATGTCCATGACATCCAGGAGA
TCCTCTCACGGGCCTACAGCCTGGACGCGAATCTAGAAGCTTGGAAATAC
GCACTCCCTGAACACTGGAAACCATTGCCTGCGGTCTATGTTCCCCAGTC
CGTGCGGGAAGCCGGCATGTACAAAAACCGCTGCGACTGCTACACCGACC
TCTGGATGGCAGGGACATGGAACTTTTACCGGGATTCCCGGATAGTCGTC
CAAAATATCATACTTCGCTGTTTGCGGATCCTACCTGATGGTGTGATGCT
GGAGCATATACAGGAGACTATTAACCTGATTGAGACTCTTGCTCTGGATA
TCTGCGCCACCGTGCCGTACATCCTTGGCAGCCAGACGATGTCAGTGCAT
GTTAGTGGGCAAAAAATCGAGTATCCGGAAGCCGATGGACGGCGGGTGAC
GACGCCTCATTATCCGACTGCTGCGCTTGTGGGGGGATGGATGGTATCGT
CTCACTTGTCGAATCTAGAATTGCTGTGTCTGAGTGAGGAGATGAATACA
TGGATTCGGGCGCAGAAGGAGCGAGTACTGCAGATATATACGTTTGGGGG
AAACGGCAGTCAGATAAGCATGTAAATGGTATACGGCGGGAAGCCAAGTA
CTGGGTGCCAGAACTGTCGCAAACGACGCATCAAGTGCGATGAAACTCGT
CCGCACTGCCGAGCATGTGTTCGGACAGGCCGGACATGTCCTGGCTATCC
CGACCCTTTTGATGTCATGTTAAGAGACCAAGTAGCGTTCCACCGCAAGA
AGCGACACACATCTAGTAAGGTCTCCACTCCGAAGATCGAAGTGGAGTCA
ATTCGATCTTCACCTGCTCCGGTAGTATCCAACGATGCTTTGATTAGCAC
CAGGCCTAGCGCAGATCTCTCGCAGACGGGATCGGTACTGCGCACTGCGC
AGCAAGAGGTCCCAAGAGGGTTGGCTCTACCAACTGACGATACTGTGACT
GCGATGTTCTTCAATTCGTACATCTACTCGCCTAGAGATCCGCTGATTTT
GCGGGGTTTCATGGATATCTTGCCTGATGTCTTCTGCTATACTCAGCCTG
GCTCTCATTTGCATGTCGGCACTTTGGCCGTGTCGTACTTTTCGGTGGCT
GCCTGGACGGGGAATCGCTCTTTTCTCCAGTCAGCGCAGCAGTTGTTTGT
GAAGGCTGTCGCCAAGACTAGGGAAGCGTTACAGGGTGACATTACTCATA
ATGTGGATGATATTCTGATGACCATTCTTCTTTTGTCTACTTATGAGGAG
TTCTGCGCTATCAAAGAAAATAGACCGTCAAGAAGGACCCATTTGCGAGG
TGCTGTTGCTCTGGTGAACAGCAAACGGCCTGAGCAGCGATCGTCGATTA
TATCATTGATCTTAGAGAATGCGGTCCAGGTACAGCTGATCAAATCATCA
AAAGGTCTGGCCTATCCCACAATGCAGACGCCAAATCAATGGCCCCCGTC
TGCACCCGTTCCACAGTCAGCATCGTCACAGCTATTAACGATCACCTCCG
AGCTGGTCAGTCTCCGACAAGCATGGGATAGATTCAACGAAGAAGGAACA
AACCATGTCCATGACATCCAGGAGATCCTCTCACGGGCCTACAGCCTGGA
CGCGAATCTAGAAGCTTGGAAATACGCACTCCCTGAACACTGGAAACCAT
TGCCTGCGGTCTATGTTCCCCAGTCCGTGCGGGAAGCCGGCATGTACAAA
AACCGCTGCGACTGCTACACCGACCTCTGGATGGCAGGGACATGGAACTT
TTACCGGGATTCCCGGATAGTCGTCCAAAATATCATACTTCGCTGTTTGC
GGATCCTACCTGATGGTGTGATGCTGGAGCATATACAGGAGACTATTAAC
CTGATTGAGACTCTTGCTCTGGATATCTGCGCCACCGTGCCGTACATCCT
TGGCAGCCAGACGATGTCAGTGCATGTTAGTGGGCAAAAAATCGAGTATC
CGGAAGCCGATGGACGGCGGGTGACGACGCCTCATTATCCGACTGCTGCG
CTTGTGGGGGGATGGATGGTATCGTCTCACTTGTCGAATCTAGAATTGCT
GTGTCTGAGTGAGGAGATGAATACATGGATTCGGGCGCAGAAGGAGCGAG
TACTGCAGATATATACGTTTGGGGGAAACGGCAGTCAGATAAGCATGTAA
ATGGTATACGGCGGGAAGCCAAGTACTGGGTGCCAGAACTGTCGCAAACG
ACGCATCAAGTGCGATGAAACTCGTCCGCACTGCCGAGCATGTGTTCGGA
CAGGCCGGACATGTCCTGGCTATCCCGACCCTTTTGATGTCATGTTAAGA
GACCAAGTAGCGTTCCACCGCAAGAAGCGACACACATCTAGTAAGGTCTC
CACTCCGAAGATCGAAGTGGAGTCAATTCGATCTTCACCTGCTCCGGTAG
TATCCAACGATGCTTTGATTAGCACCAGGCCTAGCGCAGATCTCTCGCAG
ACGGGATCGGTACTGCGCACTGCGCAGCAAGAGGTCCCAAGAGGGTTGGC
TCTACCAACTGACGATACTGTGACTGCGATGTTCTTCAATTCGTACATCT
ACTCGCCTAGAGATCCGCTGATTTTGCGGGGTTTCATGGATATCTTGCCT
GATGTCTTCTGCTATACTCAGCCTGGCTCTCATTTGCATGTCGGCACTTT
GGCCGTGTCGTACTTTTCGGTGGCTGCCTGGACGGGGAATCGCTCTTTTC
TCCAGTCAGCGCAGCAGTTGTTTGTGAAGGCTGTCGCCAAGACTAGGGAA
GCGTTACAGGGTGACATTACTCATAATGTGGATGATATTCTGATGACCAT
TCTTCTTTTGTCTACTTATGAGGAGTTCTGCGCTATCAAAGAAAATAGAC
CGTCAAGAAGGACCCATTTGCGAGGTGCTGTTGCTCTGGTGAACAGCAAA
CGGCCTGAGCAGCGATCGTCGATTATATCATTGATCTTAGAGAATGCGGT
CCAGGTACAGCTGATCAAATCATCAAAAGGTCTGGCCTATCCCACAATGC
AGACGCCAAATCAATGGCCCCCGTCTGCACCCGTTCCACAGTCAGCATCG
TCACAGCTATTAACGATCACCTCCGAGCTGGTCAGTCTCCGACAAGCATG
GGATAGATTCAACGAAGAAGGAACAAACCATGTCCATGACATCCAGGAGA
TCCTCTCACGGGCCTACAGCCTGGACGCGAATCTAGAAGCTTGGAAATAC
GCACTCCCTGAACACTGGAAACCATTGCCTGCGGTCTATGTTCCCCAGTC
CGTGCGGGAAGCCGGCATGTACAAAAACCGCTGCGACTGCTACACCGACC
TCTGGATGGCAGGGACATGGAACTTTTACCGGGATTCCCGGATAGTCGTC
CAAAATATCATACTTCGCTGTTTGCGGATCCTACCTGATGGTGTGATGCT
GGAGCATATACAGGAGACTATTAACCTGATTGAGACTCTTGCTCTGGATA
TCTGCGCCACCGTGCCGTACATCCTTGGCAGCCAGACGATGTCAGTGCAT
GTTAGTGGGCAAAAAATCGAGTATCCGGAAGCCGATGGACGGCGGGTGAC
GACGCCTCATTATCCGACTGCTGCGCTTGTGGGGGGATGGATGGTATCGT
CTCACTTGTCGAATCTAGAATTGCTGTGTCTGAGTGAGGAGATGAATACA
TGGATTCGGGCGCAGAAGGAGCGAGTACTGCAGATATATACGTTTGGGGG
AAACGGCAGTCAGATAAGCATGTAAATGGTATACGGCGGGAAGCCAAGTA
CTGGGTGCCAGAACTGTCGCAAACGACGCATCAAGTGCGATGAAACTCGT
CCGCACTGCCGAGCATGTGTTCGGACAGGCCGGACATGTCCTGGCTATCC
CGACCCTTTTGATGTCATGTTAAGAGACCAAGTAGCGTTCCACCGCAAGA
AGCGACACACATCTAGTAAGGTCTCCACTCCGAAGATCGAAGTGGAGTCA
ATTCGATCTTCACCTGCTCCGGTAGTATCCAACGATGCTTTGATTAGCAC
CAGGCCTAGCGCAGATCTCTCGCAGACGGGATCGGTACTGCGCACTGCGC
AGCAAGAGGTCCCAAGAGGGTTGGCTCTACCAACTGACGATACTGTGACT
GCGATGTTCTTCAATTCGTACATCTACTCGCCTAGAGATCCGCTGATTTT
GCGGGGTTTCATGGATATCTTGCCTGATGTCTTCTGCTATACTCAGCCTG
GCTCTCATTTGCATGTCGGCACTTTGGCCGTGTCGTACTTTTCGGTGGCT
GCCTGGACGGGGAATCGCTCTTTTCTCCAGTCAGCGCAGCAGTTGTTTGT
GAAGGCTGTCGCCAAGACTAGGGAAGCGTTACAGGGTGACATTACTCATA
ATGTGGATGATATTCTGATGACCATTCTTCTTTTGTCTACTTATGAGGAG
TTCTGCGCTATCAAAGAAAATAGACCGTCAAGAAGGACCCATTTGCGAGG
TGCTGTTGCTCTGGTGAACAGCAAACGGCCTGAGCAGCGATCGTCGATTA
TATCATTGATCTTAGAGAATGCGGTCCAGGTACAGCTGATCAAATCATCA
AAAGGTCTGGCCTATCCCACAATGCAGACGCCAAATCAATGGCCCCCGTC
TGCACCCGTTCCACAGTCAGCATCGTCACAGCTATTAACGATCACCTCCG
AGCTGGTCAGTCTCCGACAAGCATGGGATAGATTCAACGAAGAAGGAACA
AACCATGTCCATGACATCCAGGAGATCCTCTCACGGGCCTACAGCCTGGA
CGCGAATCTAGAAGCTTGGAAATACGCACTCCCTGAACACTGGAAACCAT
TGCCTGCGGTCTATGTTCCCCAGTCCGTGCGGGAAGCCGGCATGTACAAA
AACCGCTGCGACTGCTACACCGACCTCTGGATGGCAGGGACATGGAACTT
TTACCGGGATTCCCGGATAGTCGTCCAAAATATCATACTTCGCTGTTTGC
GGATCCTACCTGATGGTGTGATGCTGGAGCATATACAGGAGACTATTAAC
CTGATTGAGACTCTTGCTCTGGATATCTGCGCCACCGTGCCGTACATCCT
TGGCAGCCAGACGATGTCAGTGCATGTTAGTGGGCAAAAAATCGAGTATC
CGGAAGCCGATGGACGGCGGGTGACGACGCCTCATTATCCGACTGCTGCG
CTTGTGGGGGGATGGATGGTATCGTCTCACTTGTCGAATCTAGAATTGCT
GTGTCTGAGTGAGGAGATGAATACATGGATTCGGGCGCAGAAGGAGCGAG
TACTGCAGATATATACGTTTGGGGGAAACGGCAGTCAGATAAGCATGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF11951 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:3173706..3175418 + |
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