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CBS51388_002286-T1, CBS51388_002286-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002286-T1
Unique NameCBS51388_002286-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:3244012..3245616-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002286-T1 ID=CBS51388_002286-T1|Name=CBS51388_002286-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1605bp|location=Sequence derived from alignment at An02:3244012..3245616- (Aspergillus niger CBS 513.88)
ATGGCTGATACCATGCGTGACGAGGAGAAGGGCCACCGCGCCGCTCCAGC
CGTAGAGTCGGTCTCGTCTCCCTCGGAAAGTGGAAAAGAAATGGCCTCCT
TCCCTTCTTCAGGGAATGCCTGGACGAGGCTCAACGCTCGAATTCAATCC
ATCAAATTCCTCGAAAGCCGCGGTATCGAGCGTGTTCCGGAGTCCGAGCG
CTACGCTACCTCCGCGTCCAATTACATGCAAATGGCTCTGCTTTGGTTCA
GTACGAACATCACCGCTAACAACATTGCGGTTGGAATGTATGGGCCACTG
GACTACTCTCTGAGTTTCGTTGACTCGGCACTCTGTGCGGTGTTCGGTGC
TTTCCTTGGTGCGGCAGGTGTGGCGTATATGGGAACCTTCGGACCGCAGA
GCGGTAATCGAACAATGGTAAGCAACGTCAAGGCCATCTGCTGGAGAAAT
TATAGTACTAACAACAGAAACTTATAGGTTGTCGCGAGATATTTCATGGG
CTACTACCCGAGTAAGATTGCTTGTCTTCTGAACATTATCATCATGTTGG
GTTATGGAATGATCGACTGCCTCGTGGGTGGCCAGGTGCTGTCCGCGGTT
GCTGATGGTGGGTTAACGGTGGTGGTGGGAATCATCATCATTGCCATCAT
CACGTGGATCGTCGTGGTCTTTGGTATGGCGCCTTTCCACGTGTACGAGC
GATGGGCCTGGGTGCCTCAACTCATCGCCATTTTCGTCTTGGTCGGCAGT
GCCGGCCCGAAATTCGACACCAACATCTCCTCCACTGGCGACACCCAGAC
CATCAACGCCAACCGTCTCACCTTCTTCTCGCTCTGCCTTTCCAGTTCAG
TTGCCTGGGCCCCTGCTGGTGCTGATTTCTTCGTCTACTTCCCACCCACC
ACCTCGAAGTGGAAGACTTTCACTCTCACCCTCTTCGGTGTCGGCCTTGC
CCTCTCTTTTGCCAACCTTATGGGCATCGGCCTCGCTAGTGGCACGCTAA
CGAACCCATCCTGGGCGGAGGCCTACGACACCTCTGCTGGAGCTCTCATT
ATCGCCGGATATGACGGTCTCGGAGGATTTGGCAAGTTCTTGGGCGTCCT
CGTCGCCCTGGGTCTGATTGCCAACAACATCCCTGGAACTTACTCTGCCA
CCCTGGGCTTCCAGATCATGGGCCGCCACCTCGGCAGCCTTCCCAGATGG
TTCCTCTCCTGTGTTTGTGTGATCATCTACACTGCCTGCGCCCTAGGTGG
CCGGAACCACCTCTACGATATCTTCGAAAACTTCTTGGCCTTGATGGGTT
ATTGGGTAACCATCTATCTTACCATCGCCCTCGAAGAACACCTCATCTTC
CGCCGCACCCGCGGCTTTGATTGGGATGCCTGGGCTGACCGGTCCAAGTT
GCCCCTCGGCCTTGCTGCTCTGGCTGCGTTCTTGATCGGATGGGCGGGTG
CGATCGTCTGCATGGACCAAATATGGTATGTTGGCCCGATTGCCAGGATG
GTTGGCTCGGACGGCGCGGACCTGGGTATCTGGGTCGGTGTTTCCTGGGC
GATGCTTGTGTTCCCGCCTCTGCGGTATTTGGAGCTGCAGAAGATTGGTC
GGTAA
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Coding sequence (CDS) from alignment at An02:3244012..3245616-

>CBS51388_002286-T1 ID=CBS51388_002286-T1|Name=CBS51388_002286-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3090bp|location=Sequence derived from alignment at An02:3244012..3245616- (Aspergillus niger CBS 513.88)
GTTGTCGCGAGATATTTCATGGGCTACTACCCGAGTAAGATTGCTTGTCT
TCTGAACATTATCATCATGTTGGGTTATGGAATGATCGACTGCCTCGTGG
GTGGCCAGGTGCTGTCCGCGGTTGCTGATGGTGGGTTAACGGTGGTGGTG
GGAATCATCATCATTGCCATCATCACGTGGATCGTCGTGGTCTTTGGTAT
GGCGCCTTTCCACGTGTACGAGCGATGGGCCTGGGTGCCTCAACTCATCG
CCATTTTCGTCTTGGTCGGCAGTGCCGGCCCGAAATTCGACACCAACATC
TCCTCCACTGGCGACACCCAGACCATCAACGCCAACCGTCTCACCTTCTT
CTCGCTCTGCCTTTCCAGTTCAGTTGCCTGGGCCCCTGCTGGTGCTGATT
TCTTCGTCTACTTCCCACCCACCACCTCGAAGTGGAAGACTTTCACTCTC
ACCCTCTTCGGTGTCGGCCTTGCCCTCTCTTTTGCCAACCTTATGGGCAT
CGGCCTCGCTAGTGGCACGCTAACGAACCCATCCTGGGCGGAGGCCTACG
ACACCTCTGCTGGAGCTCTCATTATCGCCGGATATGACGGTCTCGGAGGA
TTTGGCAAGTTCTTGGGCGTCCTCGTCGCCCTGGGTCTGATTGCCAACAA
CATCCCTGGAACTTACTCTGCCACCCTGGGCTTCCAGATCATGGGCCGCC
ACCTCGGCAGCCTTCCCAGATGGTTCCTCTCCTGTGTTTGTGTGATCATC
TACACTGCCTGCGCCCTAGGTGGCCGGAACCACCTCTACGATATCTTCGA
AAACTTCTTGGCCTTGATGGGTTATTGGGTAACCATCTATCTTACCATCG
CCCTCGAAGAACACCTCATCTTCCGCCGCACCCGCGGCTTTGATTGGGAT
GCCTGGGCTGACCGGTCCAAGTTGCCCCTCGGCCTTGCTGCTCTGGCTGC
GTTCTTGATCGGATGGGCGGGTGCGATCGTCTGCATGGACCAAATATGGT
ATGTTGGCCCGATTGCCAGGATGGTTGGCTCGGACGGCGCGGACCTGGGT
ATCTGGGTCGGTGTTTCCTGGGCGATGCTTGTGTTCCCGCCTCTGCGGTA
TTTGGAGCTGCAGAAGATTGGTCGGTAAATGGCTGATACCATGCGTGACG
AGGAGAAGGGCCACCGCGCCGCTCCAGCCGTAGAGTCGGTCTCGTCTCCC
TCGGAAAGTGGAAAAGAAATGGCCTCCTTCCCTTCTTCAGGGAATGCCTG
GACGAGGCTCAACGCTCGAATTCAATCCATCAAATTCCTCGAAAGCCGCG
GTATCGAGCGTGTTCCGGAGTCCGAGCGCTACGCTACCTCCGCGTCCAAT
TACATGCAAATGGCTCTGCTTTGGTTCAGTACGAACATCACCGCTAACAA
CATTGCGGTTGGAATGTATGGGCCACTGGACTACTCTCTGAGTTTCGTTG
ACTCGGCACTCTGTGCGGTGTTCGGTGCTTTCCTTGGTGCGGCAGGTGTG
GCGTATATGGGAACCTTCGGACCGCAGAGCGGTAATCGAACAATGGTTGT
CGCGAGATATTTCATGGGCTACTACCCGAGTAAGATTGCTTGTCTTCTGA
ACATTATCATCATGTTGGGTTATGGAATGATCGACTGCCTCGTGGGTGGC
CAGGTGCTGTCCGCGGTTGCTGATGGTGGGTTAACGGTGGTGGTGGGAAT
CATCATCATTGCCATCATCACGTGGATCGTCGTGGTCTTTGGTATGGCGC
CTTTCCACGTGTACGAGCGATGGGCCTGGGTGCCTCAACTCATCGCCATT
TTCGTCTTGGTCGGCAGTGCCGGCCCGAAATTCGACACCAACATCTCCTC
CACTGGCGACACCCAGACCATCAACGCCAACCGTCTCACCTTCTTCTCGC
TCTGCCTTTCCAGTTCAGTTGCCTGGGCCCCTGCTGGTGCTGATTTCTTC
GTCTACTTCCCACCCACCACCTCGAAGTGGAAGACTTTCACTCTCACCCT
CTTCGGTGTCGGCCTTGCCCTCTCTTTTGCCAACCTTATGGGCATCGGCC
TCGCTAGTGGCACGCTAACGAACCCATCCTGGGCGGAGGCCTACGACACC
TCTGCTGGAGCTCTCATTATCGCCGGATATGACGGTCTCGGAGGATTTGG
CAAGTTCTTGGGCGTCCTCGTCGCCCTGGGTCTGATTGCCAACAACATCC
CTGGAACTTACTCTGCCACCCTGGGCTTCCAGATCATGGGCCGCCACCTC
GGCAGCCTTCCCAGATGGTTCCTCTCCTGTGTTTGTGTGATCATCTACAC
TGCCTGCGCCCTAGGTGGCCGGAACCACCTCTACGATATCTTCGAAAACT
TCTTGGCCTTGATGGGTTATTGGGTAACCATCTATCTTACCATCGCCCTC
GAAGAACACCTCATCTTCCGCCGCACCCGCGGCTTTGATTGGGATGCCTG
GGCTGACCGGTCCAAGTTGCCCCTCGGCCTTGCTGCTCTGGCTGCGTTCT
TGATCGGATGGGCGGGTGCGATCGTCTGCATGGACCAAATATGGTATGTT
GGCCCGATTGCCAGGATGGTTGGCTCGGACGGCGCGGACCTGGGTATCTG
GGTCGGTGTTTCCTGGGCGATGCTTGTGTTCCCGCCTCTGCGGTATTTGG
AGCTGCAGAAGATTGGTCGGTAAATGGCTGATACCATGCGTGACGAGGAG
AAGGGCCACCGCGCCGCTCCAGCCGTAGAGTCGGTCTCGTCTCCCTCGGA
AAGTGGAAAAGAAATGGCCTCCTTCCCTTCTTCAGGGAATGCCTGGACGA
GGCTCAACGCTCGAATTCAATCCATCAAATTCCTCGAAAGCCGCGGTATC
GAGCGTGTTCCGGAGTCCGAGCGCTACGCTACCTCCGCGTCCAATTACAT
GCAAATGGCTCTGCTTTGGTTCAGTACGAACATCACCGCTAACAACATTG
CGGTTGGAATGTATGGGCCACTGGACTACTCTCTGAGTTTCGTTGACTCG
GCACTCTGTGCGGTGTTCGGTGCTTTCCTTGGTGCGGCAGGTGTGGCGTA
TATGGGAACCTTCGGACCGCAGAGCGGTAATCGAACAATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_002286CBS51388_002286Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002286-T1CBS51388_002286-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002286-T1.cdsCBS51388_002286-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002286-T1.exon2CBS51388_002286-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_002286-T1.exon1CBS51388_002286-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR001248
DBxrefInterPro:IPR038271
DBxrefInterPro:IPR026030
DBxrefPFAM:PF02133
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:3244012..3245616 -
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