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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:3363121..3363954+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002327-T1 ID=CBS51388_002327-T1|Name=CBS51388_002327-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=834bp|location=Sequence derived from alignment at An02:3363121..3363954+ (Aspergillus niger CBS 513.88)
ATGACCGACACAGCAGATGCCCCCCAAACCAACAAGGCCTTCGTGCCCCT
CGGTACCCCCTCCTTCCCTCCCCCCAAAACACCACATATAACCACACCAA
CTAACCATTATCACCACTATTATTGCACCACAGAAAATAACCCCGAAGTA
ATGACCCACCTCGTCCGCCAACTCGGCCTCTCCCCAACCCTCGGCTTCAC
AGACGTGTGGTCAATCGACAGCCCGGACCTCCTCGCCTTCATCCCCCGCC
CCTCCTACGCCCTCCTCCTCGTCTTCCCCGTCTCCGCCGCCTACGAAGCC
ACCCGCCGAACCGAAGACGCGCCTCTCCCTGATTACACCGGCTCAGGTCC
CAACGAGCCCGTCATGTGGTTCAAGCAAACCATCCGCAACGCCTGCGGGC
TAATCGGGCTCCTGCACGCCGTGTCGAACGGCACGCCGCGGAAGCACATC
ACCCCTGGGTCCGATCTAGATAACCTGCTCAAGGAAGCGGAGGGTTTGGG
GCCGATTCAGCGCGCGGATCTGTTGTATGAGAGTAAGGCGTTGGAGAGTG
CGCATGCCGATGCGGCGAAACTGGGGGATACGGATGCGCCGGCGGCCGAG
GACTCGGTGGACTTGCATTTTGTGGCGTTTGTGAAGGGTGAGGATGGGAC
TTTGTGGGAGTTGGATGGGAGGAGGAAGGGGCCGTTGGTTAGGGGGGTTC
TTGAGGAGGGGGAGGATGCGTTGAGTGAGAGGGCTTTGCAGTTGGGGGTA
AGAAGGTTCTTGGAGGTCGAGAAGGGGAGCGGGGATGGAGATTTGAGGTT
TAGTCTTGTTAGTTTGGGGGAGGTTTTTGACTGA back to topCoding sequence (CDS) from alignment at An02:3363121..3363954+ >CBS51388_002327-T1 ID=CBS51388_002327-T1|Name=CBS51388_002327-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1506bp|location=Sequence derived from alignment at An02:3363121..3363954+ (Aspergillus niger CBS 513.88)
ATGACCGACACAGCAGATGCCCCCCAAACCAACAAGGCCTTCGTGCCCCT
CGAAAATAACCCCGAAGTAATGACCCACCTCGTCCGCCAACTCGGCCTCT
CCCCAACCCTCGGCTTCACAGACGTGTGGTCAATCGACAGCCCGGACCTC
CTCGCCTTCATCCCCCGCCCCTCCTACGCCCTCCTCCTCGTCTTCCCCGT
CTCCGCCGCCTACGAAGCCACCCGCCGAACCGAAGACGCGCCTCTCCCTG
ATTACACCGGCTCAGGTCCCAACGAGCCCGTCATGTGGTTCAAGCAAACC
ATCCGCAACGCCTGCGGGCTAATCGGGCTCCTGCACGCCGTGTCGAACGG
CACGCCGCGGAAGCACATCACCCCTGGGTCCGATCTAGATAACCTGCTCA
AGGAAGCGGAGGGTTTGGGGCCGATTCAGCGCGCGGATCTGTTGTATGAG
AGTAAGGCGTTGGAGAGTGCGCATGCCGATGCGGCGAAACTGGGGGATAC
GGATGCGCCGGCGGCCGAGGACTCGGTGGACTTGCATTTTGTGGCGTTTG
TGAAGGGTGAGGATGGGACTTTGTGGGAGTTGGATGGGAGGAGGAAGGGG
CCGTTGGTTAGGGGGGTTCTTGAGGAGGGGGAGGATGCGTTGAGTGAGAG
GGCTTTGCAGTTGGGGGTAAGAAGGTTCTTGGAGGTCGAGAAGGGGAGCG
GGGATGGAGATTTGAGGTTTAGTCTTGTTAGTTTGGGGGAGGTTTTTGAC
TGAATGACCGACACAGCAGATGCCCCCCAAACCAACAAGGCCTTCGTGCC
CCTCGAAAATAACCCCGAAGTAATGACCCACCTCGTCCGCCAACTCGGCC
TCTCCCCAACCCTCGGCTTCACAGACGTGTGGTCAATCGACAGCCCGGAC
CTCCTCGCCTTCATCCCCCGCCCCTCCTACGCCCTCCTCCTCGTCTTCCC
CGTCTCCGCCGCCTACGAAGCCACCCGCCGAACCGAAGACGCGCCTCTCC
CTGATTACACCGGCTCAGGTCCCAACGAGCCCGTCATGTGGTTCAAGCAA
ACCATCCGCAACGCCTGCGGGCTAATCGGGCTCCTGCACGCCGTGTCGAA
CGGCACGCCGCGGAAGCACATCACCCCTGGGTCCGATCTAGATAACCTGC
TCAAGGAAGCGGAGGGTTTGGGGCCGATTCAGCGCGCGGATCTGTTGTAT
GAGAGTAAGGCGTTGGAGAGTGCGCATGCCGATGCGGCGAAACTGGGGGA
TACGGATGCGCCGGCGGCCGAGGACTCGGTGGACTTGCATTTTGTGGCGT
TTGTGAAGGGTGAGGATGGGACTTTGTGGGAGTTGGATGGGAGGAGGAAG
GGGCCGTTGGTTAGGGGGGTTCTTGAGGAGGGGGAGGATGCGTTGAGTGA
GAGGGCTTTGCAGTTGGGGGTAAGAAGGTTCTTGGAGGTCGAGAAGGGGA
GCGGGGATGGAGATTTGAGGTTTAGTCTTGTTAGTTTGGGGGAGGTTTTT
GACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006511 | ubiquitin-dependent protein catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004843 | thiol-dependent ubiquitin-specific protease activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | MEROPS:MER0000836 |
| DBxref | InterPro:IPR038765 |
| DBxref | InterPro:IPR036959 |
| DBxref | InterPro:IPR001578 |
| DBxref | PFAM:PF01088 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:3363121..3363954 + |
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