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CBS51388_002330-T1, CBS51388_002330-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002330-T1
Unique NameCBS51388_002330-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:3373177..3375599+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002330-T1 ID=CBS51388_002330-T1|Name=CBS51388_002330-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2423bp|location=Sequence derived from alignment at An02:3373177..3375599+ (Aspergillus niger CBS 513.88)
ATGGCAGATGATTACGAAAGCCCCTCCTCCCCGGAGGAGGCGCCAGTCGA
GTCGCTCATTCAGGGGCGTGCGAAGCGAAGCACAGCCGGCCTTCATATGT
CAGCTCTCCTGGACGCCGCTGCCGACGATGATCTTGCGCTCTTGTTCGAG
GAAGTGGAGGATGACAACGAGTTTGCGATGGATGTGGAGGAAGAAGGGGG
AGAAGAGGATGATATGCGCTTCGAGTCTTCCTCGGATGATGAGGATGATC
AAGGACCTGAGTCTCGAGCTGACGACATGGAAGGGGAGCAACAACTACAG
AAGGAGGAGCGACAAGAGAAGAAAAAAAAGAGAGCGCGAGAAGACCTTCG
ATTCAAGATAGCCAGCAAGAAGGTGAAAATCGATCCTACTGCTGTGTCTA
CAGTGCCTACTCCTCGCCCCAAGAAGAAGTCAGAGCGTATCTCATGGATC
CCCACGCCGGAAGAAGGGCCCACGCGATCATCCTCTCGTCGCCAGACTAT
GCAGAACAAGGAACTTACGCATGCACGCCTGAAGGACAGCGAAGAGAAGC
GCATCCGCCTCATTGCCACCATGGAGGAGGCAGCTAAAAGGAAGGCCCAG
TTCAAGCCGAAGGAGATGACGCAAGCCGAGCGTCTTGCAGAAGCCGAAAG
GGTGGAGAGGCATAACAGCAAGAGTCTTAACCGATGGGAAGAAATGGAAA
AGAGGAAGGCTGAAGAAAGACGTGCGAAGATCGAGGCCCTTCAAAATCGC
CGCCTTGAAGGTCCGGTTATGTCGTACTGGAGTGGCATAGCAACCTGGGT
TAATGGTCGCTTAACGCGCATTGGCAAGGTTGATGTAACGCCAAAACCGG
AGAAGGAGGATAATAATACACGCAAGAAAAGCAAGAAGACGGACAAAGAG
AATAAAATTGTGATAGAGCAAAACCCGACCGAGAATCCTATTGTTGTTGG
TTCTGCCACGTCGCAAACAGCCCCTCCTCCCACCCAAACTGAGGGTTCTA
CGCTACCACAAACATCCGGCGACGGAGAGCCTGCAAAACCGAACCAAAAC
CCTGAACAGCAGCAAACAAGCTCTGAGCCCACTCAGACCAATGGCGCAAT
ATCCCAAGAGAAACCCGTTGATACACCAGTGGAGGCACCCACAGATACGC
CAAAGAAGGCACCCACGAATGAACCCACCGATACGCCAATGGAGGAACCC
ACCCCCTCTCAGGTGAACACAGAGGCTCCTGCTGCTGCTGATCCTGTACA
GCCTGCCACAACTGCAGTCAACGACGAGTCTGCTACAGAAGCAGTGCCAG
AATCAGGTTCATCAAAAGTCGAAGATGAAAAGAAAGAGGAAGCTACTGAG
ACCAAGGCTCCAGATGCAGCTCCGGAAGAGGGCACGTCAGATGAGAAGCC
AAATGTACAACAAAAAGACGACACTATACACGCAGTTGACGCTCAACAGC
CCACGTCGCAGCAGTCTGGCGAGAAGCCTACGCTAGAATCCGAACAGCAG
CCTGACCGAGATCCACCATCTGCGGCCGCAAAGTCCGATGACGCATCGAA
GGAAACAGTCCCTGACCCAACCGCAGCCGCTGAAGCTGTATCTGAGCCTG
CTAGGATGCAGCAGGAGCTGTCTCCTACTACAGTACCAGATGTTACTGTC
GCCCCTTCGCAGACTAACCCGCAGAAGGAGACGTCCAATCAAACACAACC
GGGCCAAGAGGCTCCGGAGGTGCATACAGACCAGCCAGTTGTTGTGACTG
AGGAAACCCCACAACCGGAGGTTCCAGAGGCCCCTCCAGTTATCGAGCAA
ACAGGACGAACCCTTACGGTGTTGGAGAACTTTGATGACAAGACCGCCCA
AAGTCGCGAGTTCAGTATCTACTTCAACGCAAAGAAACCTCCTAGGCTAA
CCAGTATGGAATGCACCTATACCTCCACTGCATGCACGAACACATTGGAC
ATGCTAACAGCAAAACAGAAATCTCTTCATCCCTCTGCGTTATTACATCA
CTTCCCTCGCGCTATCGGGATCCCGAGACCTCCCTGCCCTTCGCAAACTC
ACATGCTTACAATGAAATCCGACATACGGTGGCACAAAAGTACAGTTGGA
GCCCGATGCTGGGATGCTACGTTGGTCCTGTCGGAGTCGCTGCGCGAGGA
GTACCGGCGCGGTTCCTCGGCGGCCCTGAAGCAAAAGAAGAAGAAGCAAA
AGAGAACGGAAAGGGCGATAAAGGCGCTAACAACGAGGCCACCACTACTA
CTGACAAAACAGAAAAAAAAAAAGAGAAAGAGAACGAAGCAAAGACTTCC
ACCGGAGAGGCTCCTCCATCTACATCCAGCCCTTCAGCTGCAGCTGCACC
CGCTTCCGCACCCACACCAACAGCCACCCCCGTTGCAGCTACCGTGGGCG
ATCCAATGGATGTCGATAAATGA
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Coding sequence (CDS) from alignment at An02:3373177..3375599+

>CBS51388_002330-T1 ID=CBS51388_002330-T1|Name=CBS51388_002330-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4716bp|location=Sequence derived from alignment at An02:3373177..3375599+ (Aspergillus niger CBS 513.88)
ATGGCAGATGATTACGAAAGCCCCTCCTCCCCGGAGGAGGCGCCAGTCGA
GTCGCTCATTCAGGGGCGTGCGAAGCGAAGCACAGCCGGCCTTCATATGT
CAGCTCTCCTGGACGCCGCTGCCGACGATGATCTTGCGCTCTTGTTCGAG
GAAGTGGAGGATGACAACGAGTTTGCGATGGATGTGGAGGAAGAAGGGGG
AGAAGAGGATGATATGCGCTTCGAGTCTTCCTCGGATGATGAGGATGATC
AAGGACCTGAGTCTCGAGCTGACGACATGGAAGGGGAGCAACAACTACAG
AAGGAGGAGCGACAAGAGAAGAAAAAAAAGAGAGCGCGAGAAGACCTTCG
ATTCAAGATAGCCAGCAAGAAGGTGAAAATCGATCCTACTGCTGTGTCTA
CAGTGCCTACTCCTCGCCCCAAGAAGAAGTCAGAGCGTATCTCATGGATC
CCCACGCCGGAAGAAGGGCCCACGCGATCATCCTCTCGTCGCCAGACTAT
GCAGAACAAGGAACTTACGCATGCACGCCTGAAGGACAGCGAAGAGAAGC
GCATCCGCCTCATTGCCACCATGGAGGAGGCAGCTAAAAGGAAGGCCCAG
TTCAAGCCGAAGGAGATGACGCAAGCCGAGCGTCTTGCAGAAGCCGAAAG
GGTGGAGAGGCATAACAGCAAGAGTCTTAACCGATGGGAAGAAATGGAAA
AGAGGAAGGCTGAAGAAAGACGTGCGAAGATCGAGGCCCTTCAAAATCGC
CGCCTTGAAGGTCCGGTTATGTCGTACTGGAGTGGCATAGCAACCTGGGT
TAATGGTCGCTTAACGCGCATTGGCAAGGTTGATGTAACGCCAAAACCGG
AGAAGGAGGATAATAATACACGCAAGAAAAGCAAGAAGACGGACAAAGAG
AATAAAATTGTGATAGAGCAAAACCCGACCGAGAATCCTATTGTTGTTGG
TTCTGCCACGTCGCAAACAGCCCCTCCTCCCACCCAAACTGAGGGTTCTA
CGCTACCACAAACATCCGGCGACGGAGAGCCTGCAAAACCGAACCAAAAC
CCTGAACAGCAGCAAACAAGCTCTGAGCCCACTCAGACCAATGGCGCAAT
ATCCCAAGAGAAACCCGTTGATACACCAGTGGAGGCACCCACAGATACGC
CAAAGAAGGCACCCACGAATGAACCCACCGATACGCCAATGGAGGAACCC
ACCCCCTCTCAGGTGAACACAGAGGCTCCTGCTGCTGCTGATCCTGTACA
GCCTGCCACAACTGCAGTCAACGACGAGTCTGCTACAGAAGCAGTGCCAG
AATCAGGTTCATCAAAAGTCGAAGATGAAAAGAAAGAGGAAGCTACTGAG
ACCAAGGCTCCAGATGCAGCTCCGGAAGAGGGCACGTCAGATGAGAAGCC
AAATGTACAACAAAAAGACGACACTATACACGCAGTTGACGCTCAACAGC
CCACGTCGCAGCAGTCTGGCGAGAAGCCTACGCTAGAATCCGAACAGCAG
CCTGACCGAGATCCACCATCTGCGGCCGCAAAGTCCGATGACGCATCGAA
GGAAACAGTCCCTGACCCAACCGCAGCCGCTGAAGCTGTATCTGAGCCTG
CTAGGATGCAGCAGGAGCTGTCTCCTACTACAGTACCAGATGTTACTGTC
GCCCCTTCGCAGACTAACCCGCAGAAGGAGACGTCCAATCAAACACAACC
GGGCCAAGAGGCTCCGGAGGTGCATACAGACCAGCCAGTTGTTGTGACTG
AGGAAACCCCACAACCGGAGGTTCCAGAGGCCCCTCCAGTTATCGAGCAA
ACAGGACGAACCCTTACGGTGTTGGAGAACTTTGATGACAAGACCGCCCA
AAGTCGCGAGTTCAGTATCTACTTCAACGCAAAGAAACCTCCTAGGCTAA
CCAAAATCTCTTCATCCCTCTGCGTTATTACATCACTTCCCTCGCGCTAT
CGGGATCCCGAGACCTCCCTGCCCTTCGCAAACTCACATGCTTACAATGA
AATCCGACATACGGTGGCACAAAAGTACAGTTGGAGCCCGATGCTGGGAT
GCTACGTTGGTCCTGTCGGAGTCGCTGCGCGAGGAGTACCGGCGCGGTTC
CTCGGCGGCCCTGAAGCAAAAGAAGAAGAAGCAAAAGAGAACGGAAAGGG
CGATAAAGGCGCTAACAACGAGGCCACCACTACTACTGACAAAACAGAAA
AAAAAAAAGAGAAAGAGAACGAAGCAAAGACTTCCACCGGAGAGGCTCCT
CCATCTACATCCAGCCCTTCAGCTGCAGCTGCACCCGCTTCCGCACCCAC
ACCAACAGCCACCCCCGTTGCAGCTACCGTGGGCGATCCAATGGATGTCG
ATAAATGAATGGCAGATGATTACGAAAGCCCCTCCTCCCCGGAGGAGGCG
CCAGTCGAGTCGCTCATTCAGGGGCGTGCGAAGCGAAGCACAGCCGGCCT
TCATATGTCAGCTCTCCTGGACGCCGCTGCCGACGATGATCTTGCGCTCT
TGTTCGAGGAAGTGGAGGATGACAACGAGTTTGCGATGGATGTGGAGGAA
GAAGGGGGAGAAGAGGATGATATGCGCTTCGAGTCTTCCTCGGATGATGA
GGATGATCAAGGACCTGAGTCTCGAGCTGACGACATGGAAGGGGAGCAAC
AACTACAGAAGGAGGAGCGACAAGAGAAGAAAAAAAAGAGAGCGCGAGAA
GACCTTCGATTCAAGATAGCCAGCAAGAAGGTGAAAATCGATCCTACTGC
TGTGTCTACAGTGCCTACTCCTCGCCCCAAGAAGAAGTCAGAGCGTATCT
CATGGATCCCCACGCCGGAAGAAGGGCCCACGCGATCATCCTCTCGTCGC
CAGACTATGCAGAACAAGGAACTTACGCATGCACGCCTGAAGGACAGCGA
AGAGAAGCGCATCCGCCTCATTGCCACCATGGAGGAGGCAGCTAAAAGGA
AGGCCCAGTTCAAGCCGAAGGAGATGACGCAAGCCGAGCGTCTTGCAGAA
GCCGAAAGGGTGGAGAGGCATAACAGCAAGAGTCTTAACCGATGGGAAGA
AATGGAAAAGAGGAAGGCTGAAGAAAGACGTGCGAAGATCGAGGCCCTTC
AAAATCGCCGCCTTGAAGGTCCGGTTATGTCGTACTGGAGTGGCATAGCA
ACCTGGGTTAATGGTCGCTTAACGCGCATTGGCAAGGTTGATGTAACGCC
AAAACCGGAGAAGGAGGATAATAATACACGCAAGAAAAGCAAGAAGACGG
ACAAAGAGAATAAAATTGTGATAGAGCAAAACCCGACCGAGAATCCTATT
GTTGTTGGTTCTGCCACGTCGCAAACAGCCCCTCCTCCCACCCAAACTGA
GGGTTCTACGCTACCACAAACATCCGGCGACGGAGAGCCTGCAAAACCGA
ACCAAAACCCTGAACAGCAGCAAACAAGCTCTGAGCCCACTCAGACCAAT
GGCGCAATATCCCAAGAGAAACCCGTTGATACACCAGTGGAGGCACCCAC
AGATACGCCAAAGAAGGCACCCACGAATGAACCCACCGATACGCCAATGG
AGGAACCCACCCCCTCTCAGGTGAACACAGAGGCTCCTGCTGCTGCTGAT
CCTGTACAGCCTGCCACAACTGCAGTCAACGACGAGTCTGCTACAGAAGC
AGTGCCAGAATCAGGTTCATCAAAAGTCGAAGATGAAAAGAAAGAGGAAG
CTACTGAGACCAAGGCTCCAGATGCAGCTCCGGAAGAGGGCACGTCAGAT
GAGAAGCCAAATGTACAACAAAAAGACGACACTATACACGCAGTTGACGC
TCAACAGCCCACGTCGCAGCAGTCTGGCGAGAAGCCTACGCTAGAATCCG
AACAGCAGCCTGACCGAGATCCACCATCTGCGGCCGCAAAGTCCGATGAC
GCATCGAAGGAAACAGTCCCTGACCCAACCGCAGCCGCTGAAGCTGTATC
TGAGCCTGCTAGGATGCAGCAGGAGCTGTCTCCTACTACAGTACCAGATG
TTACTGTCGCCCCTTCGCAGACTAACCCGCAGAAGGAGACGTCCAATCAA
ACACAACCGGGCCAAGAGGCTCCGGAGGTGCATACAGACCAGCCAGTTGT
TGTGACTGAGGAAACCCCACAACCGGAGGTTCCAGAGGCCCCTCCAGTTA
TCGAGCAAACAGGACGAACCCTTACGGTGTTGGAGAACTTTGATGACAAG
ACCGCCCAAAGTCGCGAGTTCAGTATCTACTTCAACGCAAAGAAACCTCC
TAGGCTAACCAAAATCTCTTCATCCCTCTGCGTTATTACATCACTTCCCT
CGCGCTATCGGGATCCCGAGACCTCCCTGCCCTTCGCAAACTCACATGCT
TACAATGAAATCCGACATACGGTGGCACAAAAGTACAGTTGGAGCCCGAT
GCTGGGATGCTACGTTGGTCCTGTCGGAGTCGCTGCGCGAGGAGTACCGG
CGCGGTTCCTCGGCGGCCCTGAAGCAAAAGAAGAAGAAGCAAAAGAGAAC
GGAAAGGGCGATAAAGGCGCTAACAACGAGGCCACCACTACTACTGACAA
AACAGAAAAAAAAAAAGAGAAAGAGAACGAAGCAAAGACTTCCACCGGAG
AGGCTCCTCCATCTACATCCAGCCCTTCAGCTGCAGCTGCACCCGCTTCC
GCACCCACACCAACAGCCACCCCCGTTGCAGCTACCGTGGGCGATCCAAT
GGATGTCGATAAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006338chromatin remodeling
GO:0043486histone exchange
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_002330CBS51388_002330Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002330-T1.exon1CBS51388_002330-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_002330-T1.exon2CBS51388_002330-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002330-T1.cdsCBS51388_002330-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002330-T1CBS51388_002330-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR008895
DBxrefInterPro:IPR013272
DBxrefPFAM:PF08265
DBxrefPFAM:PF05764
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:3373177..3375599 +
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