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CBS51388_002338-T1, CBS51388_002338-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002338-T1
Unique NameCBS51388_002338-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:3399845..3402346+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002338-T1 ID=CBS51388_002338-T1|Name=CBS51388_002338-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2502bp|location=Sequence derived from alignment at An02:3399845..3402346+ (Aspergillus niger CBS 513.88)
ATGCAAACCTCCGATGCAAGCATTCCGAGTCGTCTGATCCCTTCCAAGTT
TTCCCACCTCAACGCGGACAGCACCGGTTTCTCTCACGGAGCATACGCCT
CCAACAATATTCCCCTGCAGGGCCTAACGGACCGGAACGCTCGTCGAGCC
AATATCCCTGCCATTAATACCTCTGCTCCCGTTTCGGACAACATGGCCGC
CTCTGGCGCCGCGTTCGACATGAACTTCACTCCCCTACTACCCTCTCAGT
TGTTGCTTGGTAGCCCCTTCCAGCCCGGTACTCCCTCCGCGTTCGCCTCG
CCTCAATTCGCCAATTTCGGTGGCTTTCCTCAGACGAATGCCTCTTCACA
TGCCCAGAATCACCAGAGCCACCATCAGCTCGGAAGTCCGACCCAGCCCT
CGCAGAATGCTGGCCTATATTCTGGTATGATGTCGACGGATGGTATAGGT
AACTCTCAAATGCTGGGGGCCCCTCAATCTCCTGTTGGTGGTTTGGGGCC
CATGGGCAACGCAGCGTACGGAAGTCCCGCTGCCTCGGTAACCCCTGGCT
TGCTTTCGGGTACGAGCCGAACCGTATACCTAGGCAATATTCCGGCAGAA
ACCTCCGCGGAAGAAATCTTGAACCATGTTCGAAGCGGCCAAATTGAGTC
GGTTCGTTTGCTTCCTGACAAGAACTGTGCTTTCATCTCCTTCCTGGACA
GCAACTCCGCAACCCACTTTCACTCGGATGCAATCTTGAAGAAGCTTGCA
ATCAAGGGAAATGATATCAAGGTGGGTTGGGGCAAACCATCTCAGGTGCC
TACTTCGGTCGCTTTGGCTGTGCAGCAGTCCGGCGCATCACGGAATGTAT
ACTTGGGGAACCTGTCGGAGGACATGACAGAGGAAGAACTGCGGGAGGAG
CTAGGAAAATTCGGCCCCATTGACACCGTCAAGATAGTCAAGGAGAAAGC
GATTGGATTTGTCCACTTCTTGTCGATCAGCAATGCAATGAAGGCTGTTT
CTCAACTTCCTCAGGAGGCTAAGTGGCAGGCACCCAGGCGGGTATTCTAC
GGCAAAGATCGGTGCGCTTATGTTTCCAAAACTCAGCAGCAAAATGCAGC
TCAGTTCTTGGGCATTGCCCCTGGTTATGCACACATTCTCAATTCGGCGG
ACCGTGATTTGATCACCAACGCACTCGCTCAGCAATCTGTCGCCGCCGCG
GCTGTGGCCACCACAGCCGGTGGAGTCAACAACTTGGGCAACCGGACCAT
CTATTTGGGCAACATTCACCCCGAAACGACTATCGAGGAGATTTGCAATG
TCGTGCGTGGTGGTTTGCTACATCATATTCGCTACATTCCCGATAAGCAT
ATCTGCTTTGTCACTTTCATTGATCCTACGTCAGCCGCGTCCTTTTACGC
CCTGAGCAACCTGCAGGGCCTCATGATTCATAACCGTCGTCTGAAGATTG
GCTGGGGTAAGCATTCCGGTCCTCTTCCGCCGGCCATTGCCCTGGCCGTG
AGTGGCGGAGCTTCTCGAAATGTCTATGTCGGTAACCTCGATGAGACCTG
GTCGGAGGAGCGCCTTCGCCAAGACTTCTCCGAGTATGGAGAGATCGAGC
TTGTCAACACGCTCCGTGAAAAGAGCTGCGCATTCGTCAATTTTACCAAC
ATTGCCAATGCCATTAAGGCAATTGAAGGGATGCGGAACCGGGATGAATA
CAAGCGATTCAAGATCAATTTCGGGAAGGATCGCTGCGGTAATCCCCCGC
GTCAAGCCGGCAATGGAGGTCCGCAGGGTCGCAATGGGTCCGGGTTTGAG
GGGCCTCAGTCACCTTCCCCAGCTTTGAATGGCTTCCAGCAGAACCTAAG
CCAATCTGGCTCGGGCTCTAGCCCGACTCATCCTGCCCTCTCTCCTGCTC
CTGGGTCTACGGGTTCTCAGAACGGCCAGCACCACAGGCATCCCCTGCAG
ACGGTCTCATCCCCATCTGGCATTCTAAATGTCGGTGCCAACAATCCGTT
GACCATGTACCTCAACCAAATGTCCGCCCAGCAAGCCCAGGAGCAGGAAA
ACCGGCTGAACGACCCCATGACCTTGGCTGGTCTTCAGTCCCAGCCTCAA
CCGCCGCAACAGCAGTCGCTCTACAATGGCGCCAGCACTGGTGAGCTTTC
CAATGGCAGCATCGAAGCCCCATTGCATCAGCACAAGCCGTCGACCAACG
GATTCTTGAACGTAACCAATGGATCTACGGGCCCCGGCCACCACGCTACC
GCTAGCACCAGCAGCCTGAATGTACCACGGGCGCAGCATTCCCGGGCCGT
GAGTTTGCCTTCGTTCTCTCAGGAGCCTTTCGGATCTGTTTCAAGCCAGC
CTCCCCGCTCCGGACTTGCTCATCAGCCGCAAAGCAGCTTTTCAAGCTTC
ACCTCTGCCCTAGGCGGTCTCAGCCACGCCGGCTTCGGATTGGCCATCCA
GAACGAGAGTTCGCTGCCCGGCTGGGCTGAGGAGGAGATTGGGGCCAAAT
AA
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Coding sequence (CDS) from alignment at An02:3399845..3402346+

>CBS51388_002338-T1 ID=CBS51388_002338-T1|Name=CBS51388_002338-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2502bp|location=Sequence derived from alignment at An02:3399845..3402346+ (Aspergillus niger CBS 513.88)
ATGCAAACCTCCGATGCAAGCATTCCGAGTCGTCTGATCCCTTCCAAGTT
TTCCCACCTCAACGCGGACAGCACCGGTTTCTCTCACGGAGCATACGCCT
CCAACAATATTCCCCTGCAGGGCCTAACGGACCGGAACGCTCGTCGAGCC
AATATCCCTGCCATTAATACCTCTGCTCCCGTTTCGGACAACATGGCCGC
CTCTGGCGCCGCGTTCGACATGAACTTCACTCCCCTACTACCCTCTCAGT
TGTTGCTTGGTAGCCCCTTCCAGCCCGGTACTCCCTCCGCGTTCGCCTCG
CCTCAATTCGCCAATTTCGGTGGCTTTCCTCAGACGAATGCCTCTTCACA
TGCCCAGAATCACCAGAGCCACCATCAGCTCGGAAGTCCGACCCAGCCCT
CGCAGAATGCTGGCCTATATTCTGGTATGATGTCGACGGATGGTATAGGT
AACTCTCAAATGCTGGGGGCCCCTCAATCTCCTGTTGGTGGTTTGGGGCC
CATGGGCAACGCAGCGTACGGAAGTCCCGCTGCCTCGGTAACCCCTGGCT
TGCTTTCGGGTACGAGCCGAACCGTATACCTAGGCAATATTCCGGCAGAA
ACCTCCGCGGAAGAAATCTTGAACCATGTTCGAAGCGGCCAAATTGAGTC
GGTTCGTTTGCTTCCTGACAAGAACTGTGCTTTCATCTCCTTCCTGGACA
GCAACTCCGCAACCCACTTTCACTCGGATGCAATCTTGAAGAAGCTTGCA
ATCAAGGGAAATGATATCAAGGTGGGTTGGGGCAAACCATCTCAGGTGCC
TACTTCGGTCGCTTTGGCTGTGCAGCAGTCCGGCGCATCACGGAATGTAT
ACTTGGGGAACCTGTCGGAGGACATGACAGAGGAAGAACTGCGGGAGGAG
CTAGGAAAATTCGGCCCCATTGACACCGTCAAGATAGTCAAGGAGAAAGC
GATTGGATTTGTCCACTTCTTGTCGATCAGCAATGCAATGAAGGCTGTTT
CTCAACTTCCTCAGGAGGCTAAGTGGCAGGCACCCAGGCGGGTATTCTAC
GGCAAAGATCGGTGCGCTTATGTTTCCAAAACTCAGCAGCAAAATGCAGC
TCAGTTCTTGGGCATTGCCCCTGGTTATGCACACATTCTCAATTCGGCGG
ACCGTGATTTGATCACCAACGCACTCGCTCAGCAATCTGTCGCCGCCGCG
GCTGTGGCCACCACAGCCGGTGGAGTCAACAACTTGGGCAACCGGACCAT
CTATTTGGGCAACATTCACCCCGAAACGACTATCGAGGAGATTTGCAATG
TCGTGCGTGGTGGTTTGCTACATCATATTCGCTACATTCCCGATAAGCAT
ATCTGCTTTGTCACTTTCATTGATCCTACGTCAGCCGCGTCCTTTTACGC
CCTGAGCAACCTGCAGGGCCTCATGATTCATAACCGTCGTCTGAAGATTG
GCTGGGGTAAGCATTCCGGTCCTCTTCCGCCGGCCATTGCCCTGGCCGTG
AGTGGCGGAGCTTCTCGAAATGTCTATGTCGGTAACCTCGATGAGACCTG
GTCGGAGGAGCGCCTTCGCCAAGACTTCTCCGAGTATGGAGAGATCGAGC
TTGTCAACACGCTCCGTGAAAAGAGCTGCGCATTCGTCAATTTTACCAAC
ATTGCCAATGCCATTAAGGCAATTGAAGGGATGCGGAACCGGGATGAATA
CAAGCGATTCAAGATCAATTTCGGGAAGGATCGCTGCGGTAATCCCCCGC
GTCAAGCCGGCAATGGAGGTCCGCAGGGTCGCAATGGGTCCGGGTTTGAG
GGGCCTCAGTCACCTTCCCCAGCTTTGAATGGCTTCCAGCAGAACCTAAG
CCAATCTGGCTCGGGCTCTAGCCCGACTCATCCTGCCCTCTCTCCTGCTC
CTGGGTCTACGGGTTCTCAGAACGGCCAGCACCACAGGCATCCCCTGCAG
ACGGTCTCATCCCCATCTGGCATTCTAAATGTCGGTGCCAACAATCCGTT
GACCATGTACCTCAACCAAATGTCCGCCCAGCAAGCCCAGGAGCAGGAAA
ACCGGCTGAACGACCCCATGACCTTGGCTGGTCTTCAGTCCCAGCCTCAA
CCGCCGCAACAGCAGTCGCTCTACAATGGCGCCAGCACTGGTGAGCTTTC
CAATGGCAGCATCGAAGCCCCATTGCATCAGCACAAGCCGTCGACCAACG
GATTCTTGAACGTAACCAATGGATCTACGGGCCCCGGCCACCACGCTACC
GCTAGCACCAGCAGCCTGAATGTACCACGGGCGCAGCATTCCCGGGCCGT
GAGTTTGCCTTCGTTCTCTCAGGAGCCTTTCGGATCTGTTTCAAGCCAGC
CTCCCCGCTCCGGACTTGCTCATCAGCCGCAAAGCAGCTTTTCAAGCTTC
ACCTCTGCCCTAGGCGGTCTCAGCCACGCCGGCTTCGGATTGGCCATCCA
GAACGAGAGTTCGCTGCCCGGCTGGGCTGAGGAGGAGATTGGGGCCAAAT
AA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_002338CBS51388_002338Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002338-T1.exon1CBS51388_002338-T1.exon1Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002338-T1.cdsCBS51388_002338-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002338-T1CBS51388_002338-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261ZFN
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034195
DBxrefInterPro:IPR018835
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
DBxrefPFAM:PF10378
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:3399845..3402346 +
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