|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:3403247..3405066+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002339-T1 ID=CBS51388_002339-T1|Name=CBS51388_002339-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1820bp|location=Sequence derived from alignment at An02:3403247..3405066+ (Aspergillus niger CBS 513.88)
ATGTCCCTGCCCCCAGAGCAAATTAATATCAAGCGTCGCAGAGAAGAGGA
ACCGGTCGAGACTTTATGTAAGACTCCCTTGATTCGTTGCATGAGCGGCC
CTTCTTTAGTGACGAGGCCCTCAACTGCACAATATCACGAGCACATCCCC
TTTGCTTATGGTCACTCTACCAAGATCCCAGCGCTAATACAATTTCCCAG
ACATTCAGTCAGAGCTGCATCAGACTAAGCGTCGATTCACGGACTTTGTT
TTTCAAAGGGTCCAGATCAGTGGCAATAGCCATGAAGACAGCTCGTCTAG
CCCGTCGTCTTTTTCAGCAGCGCGGAGAAAAGTGCTTACCCCGCGGTCGG
TGAGCAACACCGTCTATCCAACTACTGGGGGCGTGACCAACCGCGCTGCT
GGTGCAGGAGCAACTGTCCCCTTGGTAAGAGCCACGTCTCCTGGGGCAGA
GTTCCGCGAGGAACGTCGCCTGGCGAACGCTCGGAAAGAGAATGAGGAGA
AGTTGAGAAGAGCCTTGCTTTCAACGCCTACAGAGAGCCAGCTGGGAACC
CCATCTGCTGTTCCAGCTTCTATTGGATCTGATGCCGCCCGAAAGGTAGC
GTCTTCTGCATCCAGTGAGAGAGAAAGTCTGGCTTCTTCACCGGGACGGA
CGCAATCTCTACGTCGGTTCCAGATTTCTAGATCCACAACGCCAATGAGC
CCGCTCCGTAGCACAGGCGGTGGTGTTCAGAAACGCAAAGATGGCGCGGT
CGCGGTGCTAGTAGAGAAATTGAGGCGCACGCCGCATTCGAGACAAGCAT
CGATGGTCGCTGATGCTGCTGCTCAGGTGGATGAGCAGGCAAGCATGACG
GTTGCAGGCGCTCTGGCCTCGGAGAAACCAGAACGGCCGAGGAAGCGGCC
AGTAGTGAACCAGGCGGAAAAGAAATGGAGAGAGGAGCGTAAGAGCGCGA
TCTCAGCTGCTAAACAGCATATCTCACAGGTGCTGGACAGAGAAGCCGAG
GCGGCCCATCAGAGTAATTGGGAGAATGAGTCGGAACGATTGGCAAGGGA
ACTGGAGAAAGTGGCTCTGGAGCTGGATTCGGAAATGGATGTGACGGCGA
CCGAAACAGACTACACGCAGCTTTCGAGACCGTCTCGGCCTCCTTCGGTG
ATGCCCAAGCCTCCGTTGAAATACCAACCGCGCACGCCCAATAAGCATCG
TGCGGGAGCCTCGGACGCACAAGTGATGCAAGGGCCAGTAGAGAAACTTG
AAGAGGCGGCGAACACTCTGCCTGGGGGGCCTGAGGAGGAGGAAAGCGAC
GGGGAGTACGTCTACGACACGTACATACGGAAGCCACTCCCAGGCACTGG
ACTGCTTACGGACCCATTAGTCGGTTTGGATACAGACCAGGAGGCTTGGT
TGCGGCAGCATGGCATCGATGCGAATCGCCAAGACATTGGAGTTATCGTC
ATCACGCAGGAGGATGAGGAGTACTGGGAGAACTTTGTCGAGGATGAAGA
GGACGAGGACCGGTGGGATAGCGAGGACGCAGATTCGAACGGTAAGCAGT
CGATCGCAATTTTGGCAGAACCTCTGCAGAAAAGGCTAACAGCACGGGCG
TTCCCGGGCAGCTGAAAATAATCCCGCAAATGACTATCCAGATGAGGAAT
TGTCGTGGGACGATGAAGAGGACGATCCAACGGCTATCTACAACAAATAC
CGGACCTACGCTCGGTCTGATGACGAGGAGTTCGACTTTGACGACTCAGC
CAGTGAGGGGCGCCATCGTAGTGGATTCGGGTTTCGGTCGCACGTGGATT
CAGACGGCGAGAGCTGGTGA back to topCoding sequence (CDS) from alignment at An02:3403247..3405066+ >CBS51388_002339-T1 ID=CBS51388_002339-T1|Name=CBS51388_002339-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4851bp|location=Sequence derived from alignment at An02:3403247..3405066+ (Aspergillus niger CBS 513.88)
ATGTCCCTGCCCCCAGAGCAAATTAATATCAAGCGTCGCAGAGAAGAGGA
ACCGGTCGAGACTTTATACATTCAGTCAGAGCTGCATCAGACTAAGCGTC
GATTCACGGACTTTGTTTTTCAAAGGGTCCAGATCAGTGGCAATAGCCAT
GAAGACAGCTCGTCTAGCCCGTCGTCTTTTTCAGCAGCGCGGAGAAAAGT
GCTTACCCCGCGGTCGGTGAGCAACACCGTCTATCCAACTACTGGGGGCG
TGACCAACCGCGCTGCTGGTGCAGGAGCAACTGTCCCCTTGGTAAGAGCC
ACGTCTCCTGGGGCAGAGTTCCGCGAGGAACGTCGCCTGGCGAACGCTCG
GAAAGAGAATGAGGAGAAGTTGAGAAGAGCCTTGCTTTCAACGCCTACAG
AGAGCCAGCTGGGAACCCCATCTGCTGTTCCAGCTTCTATTGGATCTGAT
GCCGCCCGAAAGGTAGCGTCTTCTGCATCCAGTGAGAGAGAAAGTCTGGC
TTCTTCACCGGGACGGACGCAATCTCTACGTCGGTTCCAGATTTCTAGAT
CCACAACGCCAATGAGCCCGCTCCGTAGCACAGGCGGTGGTGTTCAGAAA
CGCAAAGATGGCGCGGTCGCGGTGCTAGTAGAGAAATTGAGGCGCACGCC
GCATTCGAGACAAGCATCGATGGTCGCTGATGCTGCTGCTCAGGTGGATG
AGCAGGCAAGCATGACGGTTGCAGGCGCTCTGGCCTCGGAGAAACCAGAA
CGGCCGAGGAAGCGGCCAGTAGTGAACCAGGCGGAAAAGAAATGGAGAGA
GGAGCGTAAGAGCGCGATCTCAGCTGCTAAACAGCATATCTCACAGGTGC
TGGACAGAGAAGCCGAGGCGGCCCATCAGAGTAATTGGGAGAATGAGTCG
GAACGATTGGCAAGGGAACTGGAGAAAGTGGCTCTGGAGCTGGATTCGGA
AATGGATGTGACGGCGACCGAAACAGACTACACGCAGCTTTCGAGACCGT
CTCGGCCTCCTTCGGTGATGCCCAAGCCTCCGTTGAAATACCAACCGCGC
ACGCCCAATAAGCATCGTGCGGGAGCCTCGGACGCACAAGTGATGCAAGG
GCCAGTAGAGAAACTTGAAGAGGCGGCGAACACTCTGCCTGGGGGGCCTG
AGGAGGAGGAAAGCGACGGGGAGTACGTCTACGACACGTACATACGGAAG
CCACTCCCAGGCACTGGACTGCTTACGGACCCATTAGTCGGTTTGGATAC
AGACCAGGAGGCTTGGTTGCGGCAGCATGGCATCGATGCGAATCGCCAAG
ACATTGGAGTTATCGTCATCACGCAGGAGGATGAGGAGTACTGGGAGAAC
TTTGTCGAGGATGAAGAGGACGAGGACCGGTGGGATAGCGAGGACGCAGA
TTCGAACGCTGAAAATAATCCCGCAAATGACTATCCAGATGAGGAATTGT
CGTGGGACGATGAAGAGGACGATCCAACGGCTATCTACAACAAATACCGG
ACCTACGCTCGGTCTGATGACGAGGAGTTCGACTTTGACGACTCAGCCAG
TGAGGGGCGCCATCGTAGTGGATTCGGGTTTCGGTCGCACGTGGATTCAG
ACGGCGAGAGCTGGTGAATGTCCCTGCCCCCAGAGCAAATTAATATCAAG
CGTCGCAGAGAAGAGGAACCGGTCGAGACTTTATACATTCAGTCAGAGCT
GCATCAGACTAAGCGTCGATTCACGGACTTTGTTTTTCAAAGGGTCCAGA
TCAGTGGCAATAGCCATGAAGACAGCTCGTCTAGCCCGTCGTCTTTTTCA
GCAGCGCGGAGAAAAGTGCTTACCCCGCGGTCGGTGAGCAACACCGTCTA
TCCAACTACTGGGGGCGTGACCAACCGCGCTGCTGGTGCAGGAGCAACTG
TCCCCTTGGTAAGAGCCACGTCTCCTGGGGCAGAGTTCCGCGAGGAACGT
CGCCTGGCGAACGCTCGGAAAGAGAATGAGGAGAAGTTGAGAAGAGCCTT
GCTTTCAACGCCTACAGAGAGCCAGCTGGGAACCCCATCTGCTGTTCCAG
CTTCTATTGGATCTGATGCCGCCCGAAAGGTAGCGTCTTCTGCATCCAGT
GAGAGAGAAAGTCTGGCTTCTTCACCGGGACGGACGCAATCTCTACGTCG
GTTCCAGATTTCTAGATCCACAACGCCAATGAGCCCGCTCCGTAGCACAG
GCGGTGGTGTTCAGAAACGCAAAGATGGCGCGGTCGCGGTGCTAGTAGAG
AAATTGAGGCGCACGCCGCATTCGAGACAAGCATCGATGGTCGCTGATGC
TGCTGCTCAGGTGGATGAGCAGGCAAGCATGACGGTTGCAGGCGCTCTGG
CCTCGGAGAAACCAGAACGGCCGAGGAAGCGGCCAGTAGTGAACCAGGCG
GAAAAGAAATGGAGAGAGGAGCGTAAGAGCGCGATCTCAGCTGCTAAACA
GCATATCTCACAGGTGCTGGACAGAGAAGCCGAGGCGGCCCATCAGAGTA
ATTGGGAGAATGAGTCGGAACGATTGGCAAGGGAACTGGAGAAAGTGGCT
CTGGAGCTGGATTCGGAAATGGATGTGACGGCGACCGAAACAGACTACAC
GCAGCTTTCGAGACCGTCTCGGCCTCCTTCGGTGATGCCCAAGCCTCCGT
TGAAATACCAACCGCGCACGCCCAATAAGCATCGTGCGGGAGCCTCGGAC
GCACAAGTGATGCAAGGGCCAGTAGAGAAACTTGAAGAGGCGGCGAACAC
TCTGCCTGGGGGGCCTGAGGAGGAGGAAAGCGACGGGGAGTACGTCTACG
ACACGTACATACGGAAGCCACTCCCAGGCACTGGACTGCTTACGGACCCA
TTAGTCGGTTTGGATACAGACCAGGAGGCTTGGTTGCGGCAGCATGGCAT
CGATGCGAATCGCCAAGACATTGGAGTTATCGTCATCACGCAGGAGGATG
AGGAGTACTGGGAGAACTTTGTCGAGGATGAAGAGGACGAGGACCGGTGG
GATAGCGAGGACGCAGATTCGAACGCTGAAAATAATCCCGCAAATGACTA
TCCAGATGAGGAATTGTCGTGGGACGATGAAGAGGACGATCCAACGGCTA
TCTACAACAAATACCGGACCTACGCTCGGTCTGATGACGAGGAGTTCGAC
TTTGACGACTCAGCCAGTGAGGGGCGCCATCGTAGTGGATTCGGGTTTCG
GTCGCACGTGGATTCAGACGGCGAGAGCTGGTGAATGTCCCTGCCCCCAG
AGCAAATTAATATCAAGCGTCGCAGAGAAGAGGAACCGGTCGAGACTTTA
TACATTCAGTCAGAGCTGCATCAGACTAAGCGTCGATTCACGGACTTTGT
TTTTCAAAGGGTCCAGATCAGTGGCAATAGCCATGAAGACAGCTCGTCTA
GCCCGTCGTCTTTTTCAGCAGCGCGGAGAAAAGTGCTTACCCCGCGGTCG
GTGAGCAACACCGTCTATCCAACTACTGGGGGCGTGACCAACCGCGCTGC
TGGTGCAGGAGCAACTGTCCCCTTGGTAAGAGCCACGTCTCCTGGGGCAG
AGTTCCGCGAGGAACGTCGCCTGGCGAACGCTCGGAAAGAGAATGAGGAG
AAGTTGAGAAGAGCCTTGCTTTCAACGCCTACAGAGAGCCAGCTGGGAAC
CCCATCTGCTGTTCCAGCTTCTATTGGATCTGATGCCGCCCGAAAGGTAG
CGTCTTCTGCATCCAGTGAGAGAGAAAGTCTGGCTTCTTCACCGGGACGG
ACGCAATCTCTACGTCGGTTCCAGATTTCTAGATCCACAACGCCAATGAG
CCCGCTCCGTAGCACAGGCGGTGGTGTTCAGAAACGCAAAGATGGCGCGG
TCGCGGTGCTAGTAGAGAAATTGAGGCGCACGCCGCATTCGAGACAAGCA
TCGATGGTCGCTGATGCTGCTGCTCAGGTGGATGAGCAGGCAAGCATGAC
GGTTGCAGGCGCTCTGGCCTCGGAGAAACCAGAACGGCCGAGGAAGCGGC
CAGTAGTGAACCAGGCGGAAAAGAAATGGAGAGAGGAGCGTAAGAGCGCG
ATCTCAGCTGCTAAACAGCATATCTCACAGGTGCTGGACAGAGAAGCCGA
GGCGGCCCATCAGAGTAATTGGGAGAATGAGTCGGAACGATTGGCAAGGG
AACTGGAGAAAGTGGCTCTGGAGCTGGATTCGGAAATGGATGTGACGGCG
ACCGAAACAGACTACACGCAGCTTTCGAGACCGTCTCGGCCTCCTTCGGT
GATGCCCAAGCCTCCGTTGAAATACCAACCGCGCACGCCCAATAAGCATC
GTGCGGGAGCCTCGGACGCACAAGTGATGCAAGGGCCAGTAGAGAAACTT
GAAGAGGCGGCGAACACTCTGCCTGGGGGGCCTGAGGAGGAGGAAAGCGA
CGGGGAGTACGTCTACGACACGTACATACGGAAGCCACTCCCAGGCACTG
GACTGCTTACGGACCCATTAGTCGGTTTGGATACAGACCAGGAGGCTTGG
TTGCGGCAGCATGGCATCGATGCGAATCGCCAAGACATTGGAGTTATCGT
CATCACGCAGGAGGATGAGGAGTACTGGGAGAACTTTGTCGAGGATGAAG
AGGACGAGGACCGGTGGGATAGCGAGGACGCAGATTCGAACGCTGAAAAT
AATCCCGCAAATGACTATCCAGATGAGGAATTGTCGTGGGACGATGAAGA
GGACGATCCAACGGCTATCTACAACAAATACCGGACCTACGCTCGGTCTG
ATGACGAGGAGTTCGACTTTGACGACTCAGCCAGTGAGGGGCGCCATCGT
AGTGGATTCGGGTTTCGGTCGCACGTGGATTCAGACGGCGAGAGCTGGTG
A back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013883 |
| DBxref | PFAM:PF08574 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:3403247..3405066 + |
|
