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CBS51388_002344-T1, CBS51388_002344-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002344-T1
Unique NameCBS51388_002344-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:3441379..3442393+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002344-T1 ID=CBS51388_002344-T1|Name=CBS51388_002344-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1015bp|location=Sequence derived from alignment at An02:3441379..3442393+ (Aspergillus niger CBS 513.88)
ATGGTTGTGGCAACAATTAAGTGCGTTGTTCTCATCATCTTTATCCCTTT
CTCTCCGCAATCACTTTTCCCCCTCCTCTCTTTCCCCTCCCCCCATTTGA
ATACACCCCCCCTCTATCCTGTCCCTTCCTTCCCCTTTCTCCGTGCAAAC
CGAACACATTCATTCATTCTTTCTTTCTTGGAGCGGCAGGTTGCTAACCA
TAGTTTGACTTTTGTCGCAGATGCGTTGTCGTCGGTGACGGTGCCGTTGG
CAAGACCTGCCTTTTGATCTCTTACACGACGAACAAGTTCCCTTCCGAAT
ATGTTCCCACGGTGTTTGATAACTATGCCGTCACAGTCATGTAAGTTAGG
GATCTCCTATCATTGAACACGATTTACATATCGGGACTCTGTCGGAGTGC
GCTATATCACACTGCCAATAGCGTTATTGGTGCAACCCAATGTCGCTGGC
TCGACGAATGCGATGGCGTCTGTGGACAAATATCGGAATCTGGAACTGAC
TCGAATCCGTTGCGCAATAGGATTGGCGATGAGCCCTACACTCTGGGATT
GTTTGATACTGCTGGTCAGGAGGATTACGATCGTCTTCGTCCTCTTTCGT
ATCCTCAGACGGATGTCTTCCTCGTTTGCTTTTCGGTCACTTCGCCTGCC
TCCTTTGAGAACGTACGCGAAAAGTGGTTCCCCGAGGTGCACCACCACTG
CCCCGGTGTCCCCTGCCTGATCGTGGGCACCCAAACCGATCTTCGCGACG
ATCCCGCTGTCCGCGAGAAGCTTGCCCGCCAGAAGATGCAACCGATTCGC
AAAGAAGATGGAGACCGTATGGCCAAGGAGCTGGGCGCAGTGAAATACGT
GGAGTGTTCTGCCCTCACGCAGTACAAGCTCAAGGACGTCTTTGACGAGG
TTAGTGTCGCGCCACATCCCGCGTCGTCGCATCCACTCACACATGTCGAT
TCTAGGCGATTGTTGCCGCGCTCGAGCCCGCTCCTAAGAAGTCGAAGAAG
TGCGTCCTGCTGTAA
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Coding sequence (CDS) from alignment at An02:3441379..3442393+

>CBS51388_002344-T1 ID=CBS51388_002344-T1|Name=CBS51388_002344-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2316bp|location=Sequence derived from alignment at An02:3441379..3442393+ (Aspergillus niger CBS 513.88)
ATGGTTGTGGCAACAATTAAATGCGTTGTCGTCGGTGACGGTGCCGTTGG
CAAGACCTGCCTTTTGATCTCTTACACGACGAACAAGTTCCCTTCCGAAT
ATGTTCCCACGGTGTTTGATAACTATGCCGTCACAGTCATGATTGGCGAT
GAGCCCTACACTCTGGGATTGTTTGATACTGCTGGTCAGGAGGATTACGA
TCGTCTTCGTCCTCTTTCGTATCCTCAGACGGATGTCTTCCTCGTTTGCT
TTTCGGTCACTTCGCCTGCCTCCTTTGAGAACGTACGCGAAAAGTGGTTC
CCCGAGGTGCACCACCACTGCCCCGGTGTCCCCTGCCTGATCGTGGGCAC
CCAAACCGATCTTCGCGACGATCCCGCTGTCCGCGAGAAGCTTGCCCGCC
AGAAGATGCAACCGATTCGCAAAGAAGATGGAGACCGTATGGCCAAGGAG
CTGGGCGCAGTGAAATACGTGGAGTGTTCTGCCCTCACGCAGTACAAGCT
CAAGGACGTCTTTGACGAGGCGATTGTTGCCGCGCTCGAGCCCGCTCCTA
AGAAGTCGAAGAAGTGCGTCCTGCTGTAAATGGTTGTGGCAACAATTAAA
TGCGTTGTCGTCGGTGACGGTGCCGTTGGCAAGACCTGCCTTTTGATCTC
TTACACGACGAACAAGTTCCCTTCCGAATATGTTCCCACGGTGTTTGATA
ACTATGCCGTCACAGTCATGATTGGCGATGAGCCCTACACTCTGGGATTG
TTTGATACTGCTGGTCAGGAGGATTACGATCGTCTTCGTCCTCTTTCGTA
TCCTCAGACGGATGTCTTCCTCGTTTGCTTTTCGGTCACTTCGCCTGCCT
CCTTTGAGAACGTACGCGAAAAGTGGTTCCCCGAGGTGCACCACCACTGC
CCCGGTGTCCCCTGCCTGATCGTGGGCACCCAAACCGATCTTCGCGACGA
TCCCGCTGTCCGCGAGAAGCTTGCCCGCCAGAAGATGCAACCGATTCGCA
AAGAAGATGGAGACCGTATGGCCAAGGAGCTGGGCGCAGTGAAATACGTG
GAGTGTTCTGCCCTCACGCAGTACAAGCTCAAGGACGTCTTTGACGAGGC
GATTGTTGCCGCGCTCGAGCCCGCTCCTAAGAAGTCGAAGAAGTGCGTCC
TGCTGTAAATGGTTGTGGCAACAATTAAATGCGTTGTCGTCGGTGACGGT
GCCGTTGGCAAGACCTGCCTTTTGATCTCTTACACGACGAACAAGTTCCC
TTCCGAATATGTTCCCACGGTGTTTGATAACTATGCCGTCACAGTCATGA
TTGGCGATGAGCCCTACACTCTGGGATTGTTTGATACTGCTGGTCAGGAG
GATTACGATCGTCTTCGTCCTCTTTCGTATCCTCAGACGGATGTCTTCCT
CGTTTGCTTTTCGGTCACTTCGCCTGCCTCCTTTGAGAACGTACGCGAAA
AGTGGTTCCCCGAGGTGCACCACCACTGCCCCGGTGTCCCCTGCCTGATC
GTGGGCACCCAAACCGATCTTCGCGACGATCCCGCTGTCCGCGAGAAGCT
TGCCCGCCAGAAGATGCAACCGATTCGCAAAGAAGATGGAGACCGTATGG
CCAAGGAGCTGGGCGCAGTGAAATACGTGGAGTGTTCTGCCCTCACGCAG
TACAAGCTCAAGGACGTCTTTGACGAGGCGATTGTTGCCGCGCTCGAGCC
CGCTCCTAAGAAGTCGAAGAAGTGCGTCCTGCTGTAAATGGTTGTGGCAA
CAATTAAATGCGTTGTCGTCGGTGACGGTGCCGTTGGCAAGACCTGCCTT
TTGATCTCTTACACGACGAACAAGTTCCCTTCCGAATATGTTCCCACGGT
GTTTGATAACTATGCCGTCACAGTCATGATTGGCGATGAGCCCTACACTC
TGGGATTGTTTGATACTGCTGGTCAGGAGGATTACGATCGTCTTCGTCCT
CTTTCGTATCCTCAGACGGATGTCTTCCTCGTTTGCTTTTCGGTCACTTC
GCCTGCCTCCTTTGAGAACGTACGCGAAAAGTGGTTCCCCGAGGTGCACC
ACCACTGCCCCGGTGTCCCCTGCCTGATCGTGGGCACCCAAACCGATCTT
CGCGACGATCCCGCTGTCCGCGAGAAGCTTGCCCGCCAGAAGATGCAACC
GATTCGCAAAGAAGATGGAGACCGTATGGCCAAGGAGCTGGGCGCAGTGA
AATACGTGGAGTGTTCTGCCCTCACGCAGTACAAGCTCAAGGACGTCTTT
GACGAGGCGATTGTTGCCGCGCTCGAGCCCGCTCCTAAGAAGTCGAAGAA
GTGCGTCCTGCTGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CDC42CBS51388_002344Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002344-T1.exon1CBS51388_002344-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_002344-T1.exon2CBS51388_002344-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_002344-T1.exon3CBS51388_002344-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_002344-T1.exon4CBS51388_002344-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002344-T1.cdsCBS51388_002344-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002344-T1CBS51388_002344-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR037874
DBxrefInterPro:IPR003578
DBxrefInterPro:IPR001806
DBxrefInterPro:IPR005225
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF00025
ProductRho GTPase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:3441379..3442393 +
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