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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:3471322..3472095+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002354-T1 ID=CBS51388_002354-T1|Name=CBS51388_002354-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=774bp|location=Sequence derived from alignment at An02:3471322..3472095+ (Aspergillus niger CBS 513.88)
ATGAGCCGGAAGCTCGCCCCCGAAGCCAATCGGTAAGTTCTGCTCGCCGA
ATCTTGCCCCTCTTCGGTCGCCCGCCATCTTTCAATTCCAGGCATTTGTT
CGGCACGTTGTTGGCTGGCAAACCTACGAGCCGGGCAAGTATCATATCTA
AAGCATCGATGCTGACCGGTTTCAGGATTCTCTTTGTAAAGAACCTCAAG
TACGTCGATGATTTCCCAAGATTCGTTCCTCGACTCGCAAACCATCCGTC
GCATACCTGTCGACCAACAGCCAGCAGGCGACAGGCGCCCATCGTCTTCC
AGAATGCAAGAGCTAACCTGATTGTTTCCTTACAGCTACAACGTCACAGC
TGAGCAACTCTTTGACCTCTTCGGCAAATTTGGTCCCATCCGGTAAATCT
GCGCATGACTCACGTTCAACCCACTTCTTGGTCAATAATGGCTAATTGTT
CCTGTTTCTTCCAGCCAAATACGTCAGGGAATCGCCAACAACTCGAAGGG
CACAGCCTTTGTGGTTTACGAAGACGTTCATGACGCCAAACAGGCATGCG
ATAAGCTCAATGGGTTCAACTTCCAGAACAGATACCTCGTCGGTATGTAA
CCCCGTGTCAAGGGGAGACGAAGCAGAGAATATATGGAGACAAGCCGATT
GGCTGACATTCGTTTCTTTCTAGTTCTATATCACCAGCCTGAGAAAATGC
TTAGGTCGAAAGAGGACTTGGCGGAAAGGCAAGAGAATTTGGAGCGTCTC
AAACAGCAACATGGGATAGAATGA back to topCoding sequence (CDS) from alignment at An02:3471322..3472095+ >CBS51388_002354-T1 ID=CBS51388_002354-T1|Name=CBS51388_002354-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1710bp|location=Sequence derived from alignment at An02:3471322..3472095+ (Aspergillus niger CBS 513.88)
ATGAGCCGGAAGCTCGCCCCCGAAGCCAATCGGATTCTCTTTGTAAAGAA
CCTCAACTACAACGTCACAGCTGAGCAACTCTTTGACCTCTTCGGCAAAT
TTGGTCCCATCCGCCAAATACGTCAGGGAATCGCCAACAACTCGAAGGGC
ACAGCCTTTGTGGTTTACGAAGACGTTCATGACGCCAAACAGGCATGCGA
TAAGCTCAATGGGTTCAACTTCCAGAACAGATACCTCGTCGTTCTATATC
ACCAGCCTGAGAAAATGCTTAGGTCGAAAGAGGACTTGGCGGAAAGGCAA
GAGAATTTGGAGCGTCTCAAACAGCAACATGGGATAGAATGAATGAGCCG
GAAGCTCGCCCCCGAAGCCAATCGGATTCTCTTTGTAAAGAACCTCAACT
ACAACGTCACAGCTGAGCAACTCTTTGACCTCTTCGGCAAATTTGGTCCC
ATCCGCCAAATACGTCAGGGAATCGCCAACAACTCGAAGGGCACAGCCTT
TGTGGTTTACGAAGACGTTCATGACGCCAAACAGGCATGCGATAAGCTCA
ATGGGTTCAACTTCCAGAACAGATACCTCGTCGTTCTATATCACCAGCCT
GAGAAAATGCTTAGGTCGAAAGAGGACTTGGCGGAAAGGCAAGAGAATTT
GGAGCGTCTCAAACAGCAACATGGGATAGAATGAATGAGCCGGAAGCTCG
CCCCCGAAGCCAATCGGATTCTCTTTGTAAAGAACCTCAACTACAACGTC
ACAGCTGAGCAACTCTTTGACCTCTTCGGCAAATTTGGTCCCATCCGCCA
AATACGTCAGGGAATCGCCAACAACTCGAAGGGCACAGCCTTTGTGGTTT
ACGAAGACGTTCATGACGCCAAACAGGCATGCGATAAGCTCAATGGGTTC
AACTTCCAGAACAGATACCTCGTCGTTCTATATCACCAGCCTGAGAAAAT
GCTTAGGTCGAAAGAGGACTTGGCGGAAAGGCAAGAGAATTTGGAGCGTC
TCAAACAGCAACATGGGATAGAATGAATGAGCCGGAAGCTCGCCCCCGAA
GCCAATCGGATTCTCTTTGTAAAGAACCTCAACTACAACGTCACAGCTGA
GCAACTCTTTGACCTCTTCGGCAAATTTGGTCCCATCCGCCAAATACGTC
AGGGAATCGCCAACAACTCGAAGGGCACAGCCTTTGTGGTTTACGAAGAC
GTTCATGACGCCAAACAGGCATGCGATAAGCTCAATGGGTTCAACTTCCA
GAACAGATACCTCGTCGTTCTATATCACCAGCCTGAGAAAATGCTTAGGT
CGAAAGAGGACTTGGCGGAAAGGCAAGAGAATTTGGAGCGTCTCAAACAG
CAACATGGGATAGAATGAATGAGCCGGAAGCTCGCCCCCGAAGCCAATCG
GATTCTCTTTGTAAAGAACCTCAACTACAACGTCACAGCTGAGCAACTCT
TTGACCTCTTCGGCAAATTTGGTCCCATCCGCCAAATACGTCAGGGAATC
GCCAACAACTCGAAGGGCACAGCCTTTGTGGTTTACGAAGACGTTCATGA
CGCCAAACAGGCATGCGATAAGCTCAATGGGTTCAACTTCCAGAACAGAT
ACCTCGTCGTTCTATATCACCAGCCTGAGAAAATGCTTAGGTCGAAAGAG
GACTTGGCGGAAAGGCAAGAGAATTTGGAGCGTCTCAAACAGCAACATGG
GATAGAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR034150 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF13893 |
| DBxref | PFAM:PF00076 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:3471322..3472095 + |
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