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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:3508883..3511104+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002367-T1 ID=CBS51388_002367-T1|Name=CBS51388_002367-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2222bp|location=Sequence derived from alignment at An02:3508883..3511104+ (Aspergillus niger CBS 513.88)
ATGAACGCGGAACCGAAGGAGCAAGATTCCCCAGCTCCGTCGGCTGAGCG
CACGGAAGCCAGTCAGGAGATTAGTGCTGCCGGAGCACAGGCCGACAAGC
CGAAGACCGAGGCCAACGGCGACGGGACTGCAAATGGTGCCTCCGCGAAC
GGCCAGAAGCCTAACCCGAAAGACCCGTCGAGACCCCGGAGGAAGAAGGC
GAGACGGGCGTGTTTTGCTTGCCAGCGCGCACACTTGACTTGCGGTACGA
CTGACCTTACTTCCAGCGTTGCTTACATTCAACCTTTTACTCTCCAATTA
CACATGCGTTTAGCGCCCATACATGCGCACTCTAGCGGCGCATGTCTTCT
GCGCGTCTGACTGAACTTGCAAACTAATCGAGGTTTCGCATAGGTGATGA
GCGACCGTGTCAGCGGTGCATTAAGCGCGGGCTCCAGGATGCGTGTCACG
ACGGGGTCCGGAAGAAGGCCAAGTACCTCCACGACGCGCCGGATGGAGCG
TTGATGCCGGGGATTGGCGGGACGTTTTACAACAACCCCATGCGCAACAG
CTTGCCCCTCTCTCGGAATGGCGCCAATGCCGTGAACGCGACCGGTCAGC
AGAGCGCTGGCGCAAACTTCTATCCTACTCCCCAGTCGACTACCTATGTC
TACCAAGAGAATACCATCAACCAGGGCTCATTTCCTTCGCAATCGCCTGT
GTCGCCGACATTCAACCTCAAGGCCACGCCTACGGCTCGAACCAACAGCC
TCTCCTCCGTCAACCCGCAACCACCGTCCACGAGCGTCTCCGGACCCCCA
GGCCAGGGTCAAAACCCGTTCGCCGGTCCCTTCTTTGACCCCAGCGACCC
CGCTCTCTTCAACTTTGACCTTTCCAGCATGAACTTTGAGAACCGATACG
GTGCGTTAGAGTTTGGCATGCTGGGACATATGGCGACGGGCGCGGGCGAT
TCACCGAGTGATTCGGCCACGCAGCGCGGGTCTATGGGGCGCAGTGGCTC
GGCACAATATGCTTCAACTCCCATCACTGGGGCACCAGGCTTTGGGGAAA
GCCCGGGCAACCAGCAGCCATTTATGTTCGGGGACCCGCTTCTCAACGAA
TGGCCCAGCGGGCAGGCCCCGGGACAACCGCATCTGCCGGGGGTTTATCC
GCAGTCCGGGCAAGGCAGCGCGATTCCTGGTCATCTGAGCAAAGCGGATG
CGCCGCATGCATTTGCCATCGAAAGCGGACCGGCCAGTTTCAATAGCCCC
GGTGCGACGACTAGTCCGCAGATGACGACTGGACTCGAAGAGACCCCGTT
TCACAGTGCGGTGGCAAGCAAGTCGAACGGGTTAGCCCCGCACGGACAAC
GACCGATGATTACAACACCGAGCTTGAAGCATCAGAACCTGCAGGTCGGC
GTGCGGCGACGACAACGTAACCCGTCGGCCATCTACGACAGCGTCAAGGA
GCCGTACGCATACACCAGCCGCTTCCATGGCCTCACGGCATTCATCCAAC
GACGGTTCCCGCCGCAGAAGACGCTTCAGATCGCCAAGGCGCTGGCGTCG
ATCCGGCCGTCGTTCATCGCGACGACTAAGACGCTCAATCGGGACGACCT
GATCTTCATGGAGAAGTGCTTCCAGCGGACGTTGTGGGAATACGAGGACT
TTATCAACGCGTGCGGCACGCCGACCATCGTGTGCCGTCGGACGGGTGAG
ATTGCTGCTGTGGGCAAGGAGTTCAGTATCTTGACGGGATGGAAGAAGGA
TGTACTGCTCGGCAAAGAGCCGAATCTCAATGTCAACACGGGTGGCTCGT
CAATGCCGAACTCCGGGGCGTCATCACGCAGCTTCACCCCCCGGTCGACA
GTGGACAACACGCCCGGGCGCCCGCAGCCGGTGTTCCTGGCAGAGTTGTT
GGACGATGACAGCGTGGTGCAGTTCTACGAGGATTTTGCACGGCTGGCGT
TTGGCGACTCGCGCGGTAGCGTGATGACAACGTGCAAGCTGTTGAAGTAC
AAGACGAAGGAGGACATGGAGGGCGCAGCAGCGGAGGATAGCCAGCGCTG
GAACAACCACCTGCGCAAGGGAGGGATTGCCAGCGAGGCGGGGATGAACC
AGCTAGGGTTCAAGGACGGCAAGGTCGAATGTGCGTACTGCTGGACAGTG
AAGCGAGATGTATTCGACATACCGATGTTGATTGTGATGAATGTGAGTAA
TACCAGCGTTCCCGTGCTGTGA back to topCoding sequence (CDS) from alignment at An02:3508883..3511104+ >CBS51388_002367-T1 ID=CBS51388_002367-T1|Name=CBS51388_002367-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4146bp|location=Sequence derived from alignment at An02:3508883..3511104+ (Aspergillus niger CBS 513.88)
ATGAACGCGGAACCGAAGGAGCAAGATTCCCCAGCTCCGTCGGCTGAGCG
CACGGAAGCCAGTCAGGAGATTAGTGCTGCCGGAGCACAGGCCGACAAGC
CGAAGACCGAGGCCAACGGCGACGGGACTGCAAATGGTGCCTCCGCGAAC
GGCCAGAAGCCTAACCCGAAAGACCCGTCGAGACCCCGGAGGAAGAAGGC
GAGACGGGCGTGTTTTGCTTGCCAGCGCGCACACTTGACTTGCGGTGATG
AGCGACCGTGTCAGCGGTGCATTAAGCGCGGGCTCCAGGATGCGTGTCAC
GACGGGGTCCGGAAGAAGGCCAAGTACCTCCACGACGCGCCGGATGGAGC
GTTGATGCCGGGGATTGGCGGGACGTTTTACAACAACCCCATGCGCAACA
GCTTGCCCCTCTCTCGGAATGGCGCCAATGCCGTGAACGCGACCGGTCAG
CAGAGCGCTGGCGCAAACTTCTATCCTACTCCCCAGTCGACTACCTATGT
CTACCAAGAGAATACCATCAACCAGGGCTCATTTCCTTCGCAATCGCCTG
TGTCGCCGACATTCAACCTCAAGGCCACGCCTACGGCTCGAACCAACAGC
CTCTCCTCCGTCAACCCGCAACCACCGTCCACGAGCGTCTCCGGACCCCC
AGGCCAGGGTCAAAACCCGTTCGCCGGTCCCTTCTTTGACCCCAGCGACC
CCGCTCTCTTCAACTTTGACCTTTCCAGCATGAACTTTGAGAACCGATAC
GGTGCGTTAGAGTTTGGCATGCTGGGACATATGGCGACGGGCGCGGGCGA
TTCACCGAGTGATTCGGCCACGCAGCGCGGGTCTATGGGGCGCAGTGGCT
CGGCACAATATGCTTCAACTCCCATCACTGGGGCACCAGGCTTTGGGGAA
AGCCCGGGCAACCAGCAGCCATTTATGTTCGGGGACCCGCTTCTCAACGA
ATGGCCCAGCGGGCAGGCCCCGGGACAACCGCATCTGCCGGGGGTTTATC
CGCAGTCCGGGCAAGGCAGCGCGATTCCTGGTCATCTGAGCAAAGCGGAT
GCGCCGCATGCATTTGCCATCGAAAGCGGACCGGCCAGTTTCAATAGCCC
CGGTGCGACGACTAGTCCGCAGATGACGACTGGACTCGAAGAGACCCCGT
TTCACAGTGCGGTGGCAAGCAAGTCGAACGGGTTAGCCCCGCACGGACAA
CGACCGATGATTACAACACCGAGCTTGAAGCATCAGAACCTGCAGGTCGG
CGTGCGGCGACGACAACGTAACCCGTCGGCCATCTACGACAGCGTCAAGG
AGCCGTACGCATACACCAGCCGCTTCCATGGCCTCACGGCATTCATCCAA
CGACGGTTCCCGCCGCAGAAGACGCTTCAGATCGCCAAGGCGCTGGCGTC
GATCCGGCCGTCGTTCATCGCGACGACTAAGACGCTCAATCGGGACGACC
TGATCTTCATGGAGAAGTGCTTCCAGCGGACGTTGTGGGAATACGAGGAC
TTTATCAACGCGTGCGGCACGCCGACCATCGTGTGCCGTCGGACGGGTGA
GATTGCTGCTGTGGGCAAGGAGTTCAGTATCTTGACGGGATGGAAGAAGG
ATGTACTGCTCGGCAAAGAGCCGAATCTCAATGTCAACACGGGTGGCTCG
TCAATGCCGAACTCCGGGGCGTCATCACGCAGCTTCACCCCCCGGTCGAC
AGTGGACAACACGCCCGGGCGCCCGCAGCCGGTGTTCCTGGCAGAGTTGT
TGGACGATGACAGCGTGGTGCAGTTCTACGAGGATTTTGCACGGCTGGCG
TTTGGCGACTCGCGCGGTAGCGTGATGACAACGTGCAAGCTGTTGAAGTA
CAAGACGAAGGAGGACATGGAGGGCGCAGCAGCGGAGGATAGCCAGCGCT
GGAACAACCACCTGCGCAAGGGAGGGATTGCCAGCGAGGCGGGGATGAAC
CAGCTAGGGTTCAAGGACGGCAAGGTCGAATGTGCGTACTGCTGGACAGT
GAAGCGAGATGTATTCGACATACCGATGTTGATTGTGATGAATGTGAGTA
ATACCAGCGTTCCCGTGCTGTGAATGAACGCGGAACCGAAGGAGCAAGAT
TCCCCAGCTCCGTCGGCTGAGCGCACGGAAGCCAGTCAGGAGATTAGTGC
TGCCGGAGCACAGGCCGACAAGCCGAAGACCGAGGCCAACGGCGACGGGA
CTGCAAATGGTGCCTCCGCGAACGGCCAGAAGCCTAACCCGAAAGACCCG
TCGAGACCCCGGAGGAAGAAGGCGAGACGGGCGTGTTTTGCTTGCCAGCG
CGCACACTTGACTTGCGGTGATGAGCGACCGTGTCAGCGGTGCATTAAGC
GCGGGCTCCAGGATGCGTGTCACGACGGGGTCCGGAAGAAGGCCAAGTAC
CTCCACGACGCGCCGGATGGAGCGTTGATGCCGGGGATTGGCGGGACGTT
TTACAACAACCCCATGCGCAACAGCTTGCCCCTCTCTCGGAATGGCGCCA
ATGCCGTGAACGCGACCGGTCAGCAGAGCGCTGGCGCAAACTTCTATCCT
ACTCCCCAGTCGACTACCTATGTCTACCAAGAGAATACCATCAACCAGGG
CTCATTTCCTTCGCAATCGCCTGTGTCGCCGACATTCAACCTCAAGGCCA
CGCCTACGGCTCGAACCAACAGCCTCTCCTCCGTCAACCCGCAACCACCG
TCCACGAGCGTCTCCGGACCCCCAGGCCAGGGTCAAAACCCGTTCGCCGG
TCCCTTCTTTGACCCCAGCGACCCCGCTCTCTTCAACTTTGACCTTTCCA
GCATGAACTTTGAGAACCGATACGGTGCGTTAGAGTTTGGCATGCTGGGA
CATATGGCGACGGGCGCGGGCGATTCACCGAGTGATTCGGCCACGCAGCG
CGGGTCTATGGGGCGCAGTGGCTCGGCACAATATGCTTCAACTCCCATCA
CTGGGGCACCAGGCTTTGGGGAAAGCCCGGGCAACCAGCAGCCATTTATG
TTCGGGGACCCGCTTCTCAACGAATGGCCCAGCGGGCAGGCCCCGGGACA
ACCGCATCTGCCGGGGGTTTATCCGCAGTCCGGGCAAGGCAGCGCGATTC
CTGGTCATCTGAGCAAAGCGGATGCGCCGCATGCATTTGCCATCGAAAGC
GGACCGGCCAGTTTCAATAGCCCCGGTGCGACGACTAGTCCGCAGATGAC
GACTGGACTCGAAGAGACCCCGTTTCACAGTGCGGTGGCAAGCAAGTCGA
ACGGGTTAGCCCCGCACGGACAACGACCGATGATTACAACACCGAGCTTG
AAGCATCAGAACCTGCAGGTCGGCGTGCGGCGACGACAACGTAACCCGTC
GGCCATCTACGACAGCGTCAAGGAGCCGTACGCATACACCAGCCGCTTCC
ATGGCCTCACGGCATTCATCCAACGACGGTTCCCGCCGCAGAAGACGCTT
CAGATCGCCAAGGCGCTGGCGTCGATCCGGCCGTCGTTCATCGCGACGAC
TAAGACGCTCAATCGGGACGACCTGATCTTCATGGAGAAGTGCTTCCAGC
GGACGTTGTGGGAATACGAGGACTTTATCAACGCGTGCGGCACGCCGACC
ATCGTGTGCCGTCGGACGGGTGAGATTGCTGCTGTGGGCAAGGAGTTCAG
TATCTTGACGGGATGGAAGAAGGATGTACTGCTCGGCAAAGAGCCGAATC
TCAATGTCAACACGGGTGGCTCGTCAATGCCGAACTCCGGGGCGTCATCA
CGCAGCTTCACCCCCCGGTCGACAGTGGACAACACGCCCGGGCGCCCGCA
GCCGGTGTTCCTGGCAGAGTTGTTGGACGATGACAGCGTGGTGCAGTTCT
ACGAGGATTTTGCACGGCTGGCGTTTGGCGACTCGCGCGGTAGCGTGATG
ACAACGTGCAAGCTGTTGAAGTACAAGACGAAGGAGGACATGGAGGGCGC
AGCAGCGGAGGATAGCCAGCGCTGGAACAACCACCTGCGCAAGGGAGGGA
TTGCCAGCGAGGCGGGGATGAACCAGCTAGGGTTCAAGGACGGCAAGGTC
GAATGTGCGTACTGCTGGACAGTGAAGCGAGATGTATTCGACATACCGAT
GTTGATTGTGATGAATGTGAGTAATACCAGCGTTCCCGTGCTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:3508883..3511104 + |
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